Tan0003476 (gene) Snake gourd v1

Overview


Name	Tan0003476
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	chromatin modification-related protein MEAF6
Location	LG06: 10546237 .. 10551227 (+)
RNA-Seq Expression	Tan0003476
Synteny	Tan0003476

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATTCCATAATTAAATCATTTTTTCCTATTTCAAACGGAACCTAGATTCCTCGTGTTCGTCAAAATTTTCCCCAAATTATTTTAGGGTTTCCCGCGACAATATGGAAGCTGAAGGTAACCGTTGGATTCCTCTTCGATTTTTGCTTTTCTTTCTCAATTTGAATTTGTAGATGAATTGTTCTGTTCTTCACGCTCTTCAATTATGGAAAATTATGCTTCAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTCACCAGGAGAGCTAAACTCCACGACGAGCTTCGGAACATCGAGAAGCAGGTTTGGAGGGCTTTTTGTCTTTTGTTTTCTGTTTAAATTTTATTTGGGTATCTACGATTTTACGCTTATTTGCTACTTATACTTTGAAATCTTATGCCACTTGTTCTGAATTCACTCTCACACATTAGTAGTAGTTCTTGTGGGTTGGAATATGAGTACACGTAATATTTTGCATTTTTTATTTTAACTATTGCAATGTGTAGATTTAGTAGTGAGGATCAAAAGGGTTATCTAGGGAAAATTTAGGATTAAAACAGAATATTTGAAAGGCCTTGGATGTAAGGAATAAGGGTGACAACACCTGAAAAGGAAGAAGGCAATAAGAAGATCTACATACATGTGTAAGCCGTATGTTGCAGACTAACATAACAGAGAAGGAAGACTGAAGTAGTAAGGAATATCAACTGGAGAAGGGGAAATAATAAACTGAAAGTATATATGCTCCAACATCCTCTGTAAGCGAATGAGGGTGATGAGTGATCGGGAGCCTGGTGCGGTAACTATAGAAGTGCATTGAAGGCGGTGCTTTGCTTATGATATATATATATATATATTTTATGAGAAACTTATAAGCATTTCATTGATAGTATGAAATGTACAAAAGGGGACCCAAATACATAAGGGGTGTAGGGACCCAATTACAAAAGGTTTTCCCAATTGCTAATAAGGGAAGTAAGACTATAGTCACAAAAAAAAAGAAGGAGAATTTACCCCAAGAGAAAGCAAGGTAAAGAAGGTGTTCTAGAACCATGTGGGGCTCTCAGCAAGTTGATCTTTAGAGAAGTCAAAATTAAGAATTAACTTCCTTCGAGCTACATGTTCCCGAATAAAGCAGTGATCTATTTCCATATCTTAGTGCGATAATGCACCATAGGATTCACTGCTATGTATGGTGCATAGAAGTAAGGGCAAGCTGGACAAACGAAGACAAATTCCTTGTAGCAACGATTGGACCCAAAAATATTAGTGCTTAAAACTAAATGTATTTAAAAGTTCATGATTTAAACCGTTATCTTTTTTCTAATCCTTTCTTTCAGTTTATTTATCTAATTTCTTAAATTAGGTTGTAGGGCCAGAATTACACTGGTTTATGGTTTTTATATTTGTCGTGGATTTGGTACTTCAATTATTTACTGTCTTTAGATGGAGTGAGAAATTTACATGTTTGTTCGTTTTTATTTATGAAATTTCTAGGCTTTAAGGATTTTCTTTTATTTTATGTTTTATAGGCTCTCTTTGTCACTACATCAATGAAATGCTTAGGAGAAAAAAACATTGCAGTTTGACACTTGTTATAGGTTGTGTATAAGAACAGTGCAATGATATTGTGGTTTTATGCCCTCAAGGATCAAACTACCTGAAATGCAGTCTAATTTGGAAATGCAAAACTTTGAGCTTGAGACTTTTTCTGTGGGCCCTCTACCTAAAAGATTTAAGTTCTAATGACAGAATTTAGAAGAAACTCCTTAACAACAACAAATCGGAACTCTCTATTAAAGCATATAGCAACCCCTTACGGAAACTACTGATGACAAATACAAAGATAAATTCCAAACAATTACAACAAAATCCTCCAGCTGGAGTTGGCTACATTATGAGAATAATATCTTTCATACCAATTTAATGATTGTTCTTGAAAGATTCTTTGGCAAACCACATACACTAAAGAGTAGTTTATACTACATTAACCCACAACAACCTAGCTTTATTTTTCAGAGTGTTTTCCTTTTATCTTCTATCAAAAACCCAAGAATATTAAAGATCTTTAAAAATGTTCTCCCAACTCATTGCCACTGTAGAAAGCCATTTTCCTTTTTCTTAATTTTTGAACAAGAAACAGAAACTTTTTGTTGATATTATAGTTTGTAAATTTACAATAAAATTACATTCTTCTTTCAGGAGAAGTTAAAGTACAAGAGCTTACCCCATAAACAAAAACAATAGTGTTGTATTCTTAAAAAAAAAAAATTAGATTTGCTTCTTTGGCTTTACTTCCATGTAATGTTAATACTTATTCCTGTAAAATATGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGTCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTGTATGGAGTGTCTATAATATTATTTCTCAAACCTCAGCAAATTTTCCTTTAAAGTTTTCTTGATTCTTGCATGTTACTTGTCTTAACACATTGAGGTTTATGTTTACTGAATTTTCTTTTATTAATGGGATCGGTGAAATATTCTCTTTCCTTAAATATAAATCTTTGAGGTTTAGATTTAATTTCTATTTAGTTCATGAAGTTTTAAAAGCAACACTTTAGTCCTTGAGATGAGGTTTGGGTGGTGGTGCTCATTTAATGTTCAGTATTCTTACAAAGTCTTTTTTCCTTCATTTTTTTATTGTTAGGTCAAATTTTTGTACTTTTATTCATTTTAATGGAAGGCTTGTATTTTTGTTAAAAAAATGAAAGTAAAGTAAAGTTTCTAAATACTTGTGGATGCAGTTTGAAGCGATCTAGGAAGTTTCAGCTTGACGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGTATGTACTTTGGCTCTTAACCTGTGACTGAACTGCAAATTAAGTTTTTTTTTCTGATTATTCATGTTGTGCTCTCCCTCTGTGAATGGACAGTTTTTCATGTAATGAGCAAGGAAGTTGAGATTTCCTGCGCTTCATCATGTATCTTGTATTAGATACTACAATCAAATTCTCAATCAAATTCTTCTTACTTACAGGACGAAGAACTTTCTACTTGGTGCTAAGTTTTTCTCGAGAATACTTTTAGTTATGTTATAGGAGAAATCATTTTTCATGTAAAACAGTTGTAAACTGGTTTTAATAGATTTGATTTACAAAAGATAAACGTATCTAGGGGGCTTAGTCAATGACATCCTACTTTGTACAAGGTTGTGAGTCTGGGGCTAATAATATCATGGTTTCACGTATCCAATCTCTTGATGATACTTTGCTTTTATGCAAGTATGACAAGGATTGCTTGAAGAATTGCTTTTTGGTGTTGAAAACTTTTGAGGGAGTTATCAGGCTGAAGATGATTCTAGAGAGAACCCAAATTTGTGGAATCAATATTTTGTGGAGGGAGTTCAGATTTATGCTGGAAATTTGGCTGTAAAGCTGTTTTTTACGCATGATTCTTTTAGGAATTTATTTGGGAGGGCAGTTCTTGAAAGGAAGAGTTTTGGAAGCTGATGATTGAGGTGTATTGTAGTAAAAAAAAATAAGTAGAGAACATTAAGGTTGACTTTATGTAATGCAGGTCTTGAGAGCCTTCCTGCTTATTTTATGTCTGTTTTCTTTTTACTGAAGGAAGAGAGATAAAGTGGAGAGGAAAATTAATTTTCTTTCGAGAGGGAATATTGGAGGAAACTTGAATCATAAGTAAATCGGGGAATGGTTTTGTGAAATGTGAAAGTGGGTTAGGATTTATTTCAGGAGTACTAGAGTTGAACAAAAAAAAAAAAAAAATGAACCACGGAGGGAGCTGTTCCAATACTAAGAGATGTTAAAAAGCAGAGAAGGCATGATATGGCAATGAAGTTTCATCGTATATGCTATAGAATATACTTTGTTTTCCATCTGGAAAATGTAAAATTTGTTATCTTGTACTTTTAGCCCTTCTGTCCTTTAATTTCTCATTTTCTTGTATCTTAAAACTACACTTTGTTCTAACCTCTCTTCCTCTCGCCATAGTTTCTACTGTTAGTTTGTCTCGGGTTTGATATTTCTTTTTTCTTTCCTTTAATTTTCAGGCTGAAGAACTTGCAGCTGGACGAGATGGTGAGCATCACAGTAACCTGAACAGTGTTTTTTGTAATCAAAATTTTACAGTCTTCTTTTGTGAACCTTGTTGCAGATGGAAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAGTTAGTATTCTGCCATTTTTTCCTTCATTCGACGATGTTGCTTTAAATTTCTGTAACGTAAATGCCATCTAACAAAATAATTAACACCCACCTATAAAAAGGAAAAATGAAACAACATATCTGTAACCTGAACTATTTTACTTTATAACAATGAGCTTTGAAGCTCTTTTATCTTCAGATAGTATATATGAAAATATATGCATTGCATATGCAGAGGGAAACCGAAAAAGGGAAGACCGACACCGAGGGATGCAAAGAGAATGCGGCATTCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTTGACATTATGAATGCTGTAACTGGTACCTCTGATGGCGTCTTTGTCATCTACAGTGTTGAAAGATAACCACCCCATCCTTACTGGGGCTAACATAGGGAAGTGTAGCTATTTATATCTGTGTTTTGCCACGTTTGTTGTTGGATGCTTTTATATTATAAATGAAGTGGATAGAGTTTCGAATCTATGATCTTATATTGTCTAACCATTTGAACCATGCTCATATCAGAACTTGGATCTTTGCTTACGAAGGTGTATTCATAAATAAAATGTTAAATTGCCCACTTGGTTCATTATGCGACATTGACTTTACCTTTGTTTCAATTTTATTTGTTACTGTAATGTTGTAGTGGCCTCCTGAGA

mRNA sequence

TTTTATTCCATAATTAAATCATTTTTTCCTATTTCAAACGGAACCTAGATTCCTCGTGTTCGTCAAAATTTTCCCCAAATTATTTTAGGGTTTCCCGCGACAATATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTCACCAGGAGAGCTAAACTCCACGACGAGCTTCGGAACATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGTCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTGAAGCGATCTAGGAAGTTTCAGCTTGACGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAACTTGCAGCTGGACGAGATGATGGAAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCGAAAAAGGGAAGACCGACACCGAGGGATGCAAAGAGAATGCGGCATTCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTTGACATTATGAATGCTGTAACTGGTACCTCTGATGGCGTCTTTGTCATCTACAGTGTTGAAAGATAACCACCCCATCCTTACTGGGGCTAACATAGGGAAGTGTAGCTATTTATATCTGTGTTTTGCCACGTTTGTTGTTGGATGCTTTTATATTATAAATGAAGTGGATAGAGTTTCGAATCTATGATCTTATATTGTCTAACCATTTGAACCATGCTCATATCAGAACTTGGATCTTTGCTTACGAAGGTGTATTCATAAATAAAATGTTAAATTGCCCACTTGGTTCATTATGCGACATTGACTTTACCTTTGTTTCAATTTTATTTGTTACTGTAATGTTGTAGTGGCCTCCTGAGA

Coding sequence (CDS)

ATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTCACCAGGAGAGCTAAACTCCACGACGAGCTTCGGAACATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGTCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTGAAGCGATCTAGGAAGTTTCAGCTTGACGATAGGCTCTTCTCATTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAACTTGCAGCTGGACGAGATGATGGAAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCGAAAAAGGGAAGACCGACACCGAGGGATGCAAAGAGAATGCGGCATTCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTTGACATTATGA

Protein sequence

MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL

Homology

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BLAST of Tan0003476 vs. ExPASy Swiss-Prot
Match: Q2VPQ9 (Chromatin modification-related protein MEAF6 OS=Mus musculus OX=10090 GN=Meaf6 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 16  LAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 75
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 76  SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 122
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

[Close]

BLAST of Tan0003476 vs. ExPASy Swiss-Prot
Match: Q68ER9 (Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis OX=8364 GN=meaf6 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 16  LAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 75
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 76  SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 122
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

[Close]

BLAST of Tan0003476 vs. ExPASy Swiss-Prot
Match: Q52KD8 (Chromatin modification-related protein MEAF6 OS=Xenopus laevis OX=8355 GN=meaf6 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 16  LAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 75
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 76  SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 122
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSSLAGVQD---QLIEKREPGSGTESD 123

[Close]

BLAST of Tan0003476 vs. ExPASy Swiss-Prot
Match: Q58CU0 (Chromatin modification-related protein MEAF6 OS=Bos taurus OX=9913 GN=MEAF6 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 16  LAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 75
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 76  SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTP 135
           +RKF+  +RLFS SSVTS AA    AG  D   +                 K + G  T 
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIE-----------------KREPGSGTE 138

Query: 136 RDAKRMRHSSEQDFDYDDDPDL 156
            D     H+ E + + +D  DL
Sbjct: 139 SDTSPDFHNQENEPNQEDPEDL 143

[Close]

BLAST of Tan0003476 vs. ExPASy Swiss-Prot
Match: Q5ZIX3 (Chromatin modification-related protein MEAF6 OS=Gallus gallus OX=9031 GN=MEAF6 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 16  LAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALL--KR 75
           LA L+ R+ +L + L N+E+Q+Y  E +YL+D    GN+++G++ +L+  K++     +R
Sbjct: 21  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80

Query: 76  SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG--KPKKGRP 135
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+       ++  P
Sbjct: 81  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESDTSPDFHNQENEP 140

Query: 136 TPRDAKRM 140
           +  DA+ +
Sbjct: 141 SQEDAEEL 145

[Close]

BLAST of Tan0003476 vs. NCBI nr
Match: XP_022959661.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata] >XP_022959662.1 chromatin modification-related protein MEAF6-like isoform X2 [Cucurbita moschata] >XP_023515245.1 chromatin modification-related protein MEAF6-like [Cucurbita pepo subsp. pepo] >KAG6593073.1 Chromatin modification-related protein MEAF6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKS+ALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of Tan0003476 vs. NCBI nr
Match: KAG7025484.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 746 MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 805

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKS+ALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 806 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 865

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 866 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 902

[Close]

BLAST of Tan0003476 vs. NCBI nr
Match: XP_022143603.1 (chromatin modification-related protein MEAF6 [Momordica charantia])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           ME+EGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYL DPSQCGNVLKGFEG
Sbjct: 49  MESEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLHDPSQCGNVLKGFEG 108

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKSTALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 109 FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 168

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 169 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 205

[Close]

BLAST of Tan0003476 vs. NCBI nr
Match: XP_023004365.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASK++ALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKNSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of Tan0003476 vs. NCBI nr
Match: XP_022954305.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR+IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRSIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKSTALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMR SSEQDFDYDDDPD TL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRQSSEQDFDYDDDPDSTL 157

[Close]

BLAST of Tan0003476 vs. ExPASy TrEMBL
Match: A0A6J1H5H2 (chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460674 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.0e-79
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKS+ALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of Tan0003476 vs. ExPASy TrEMBL
Match: A0A6J1CR40 (chromatin modification-related protein MEAF6 OS=Momordica charantia OX=3673 GN=LOC111013461 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.6e-79
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           ME+EGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYL DPSQCGNVLKGFEG
Sbjct: 49  MESEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLHDPSQCGNVLKGFEG 108

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKSTALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 109 FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 168

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 169 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 205

[Close]

BLAST of Tan0003476 vs. ExPASy TrEMBL
Match: A0A6J1KUD2 (chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497707 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASK++ALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKNSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of Tan0003476 vs. ExPASy TrEMBL
Match: A0A6J1GS23 (chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456594 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLLTRRAKLHDELR+IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRSIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKSTALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRPTPRDAKRMR SSEQDFDYDDDPD TL
Sbjct: 121 NGQGKPKKGRPTPRDAKRMRQSSEQDFDYDDDPDSTL 157

[Close]

BLAST of Tan0003476 vs. ExPASy TrEMBL
Match: A0A5D3CCW4 (Chromatin modification-related protein MEAF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00580 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.7e-77
Identity = 152/157 (96.82%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MEAEGQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60
           MEAEGQKTATNPSAMLAGLL+RRAKL DELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 61  FLSASKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 120
           FLSASKSTALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYS 120

Query: 121 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 158
           NGQGKPKKGRP PRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of Tan0003476 vs. TAIR 10
Match: AT4G14385.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47
Identity = 101/156 (64.74%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 5   GQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSA 64
           GQK++T+P AML  LL +R KL  ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+
Sbjct: 4   GQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSS 63

Query: 65  SKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG 124
           SKSTA  KRSRKFQ +DR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG    + QG
Sbjct: 64  SKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG---LSTQG 123

Query: 125 KPKKGRP---TPRDAKRMRHSSEQDFDYDDDPDLTL 158
           KPKKGR      R+AKR R S+E D++ +DDPD+ +
Sbjct: 124 KPKKGRGQSIIAREAKRSRPSTEPDYEDEDDPDMNM 156

[Close]

BLAST of Tan0003476 vs. TAIR 10
Match: AT4G14385.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 161.0 bits (406), Expect = 7.8e-40
Identity = 81/112 (72.32%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 5   GQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSA 64
           GQK++T+P AML  LL +R KL  ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+
Sbjct: 4   GQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSS 63

Query: 65  SKSTALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG 117
           SKSTA  KRSRKFQ +DR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG
Sbjct: 64  SKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG 115

[Close]

BLAST of Tan0003476 vs. TAIR 10
Match: AT4G14385.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-29
Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 5  GQKTATNPSAMLAGLLTRRAKLHDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSA 64
          GQK++T+P AML  LL +R KL  ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+
Sbjct: 4  GQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSS 63

Query: 65 SKSTALLKRSRKFQLDDRLFSLSSVTSPA 94
          SKSTA  KRSRKFQ +DR+FSLSSVTSPA
Sbjct: 64 SKSTASAKRSRKFQPEDRVFSLSSVTSPA 92

The following BLAST results are available for this feature:

BLAST of Tan0003476 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2VPQ9	3.7e-10	38.89	Chromatin modification-related protein MEAF6 OS=Mus musculus OX=10090 GN=Meaf6 P...	[more]
Q68ER9	3.7e-10	38.89	Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis OX=8364 GN=me...	[more]
Q52KD8	4.8e-10	38.89	Chromatin modification-related protein MEAF6 OS=Xenopus laevis OX=8355 GN=meaf6 ...	[more]
Q58CU0	1.8e-09	32.39	Chromatin modification-related protein MEAF6 OS=Bos taurus OX=9913 GN=MEAF6 PE=2...	[more]
Q5ZIX3	1.8e-09	35.16	Chromatin modification-related protein MEAF6 OS=Gallus gallus OX=9031 GN=MEAF6 P...	[more]

BLAST of Tan0003476 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959661.1	1.0e-78	98.73	chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata...	[more]
KAG7025484.1	1.0e-78	98.73	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022143603.1	1.8e-78	98.09	chromatin modification-related protein MEAF6 [Momordica charantia]	[more]
XP_023004365.1	2.3e-78	98.09	chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita maxima]	[more]
XP_022954305.1	3.4e-77	97.45	chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata...	[more]

BLAST of Tan0003476 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5H2	5.0e-79	98.73	chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moscha...	[more]
A0A6J1CR40	8.6e-79	98.09	chromatin modification-related protein MEAF6 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1KUD2	1.1e-78	98.09	chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1GS23	1.6e-77	97.45	chromatin modification-related protein MEAF6-like isoform X1 OS=Cucurbita moscha...	[more]
A0A5D3CCW4	4.7e-77	96.82	Chromatin modification-related protein MEAF6 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Tan0003476 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14385.1	1.7e-47	64.74	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G14385.2	7.8e-40	72.32	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G14385.3	2.1e-29	70.79	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..157
None	No IPR available	PANTHER	PTHR13476:SF2	CHROMATIN MODIFICATION MEAF6-LIKE PROTEIN	coord: 1..157
IPR015418	Chromatin modification-related protein Eaf6	PFAM	PF09340	NuA4	coord: 16..92 e-value: 1.3E-24 score: 85.9
IPR015418	Chromatin modification-related protein Eaf6	PANTHER	PTHR13476	UNCHARACTERIZED	coord: 1..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003476.1	Tan0003476.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0043968	histone H2A acetylation
biological_process	GO:0044154	histone H3-K14 acetylation
biological_process	GO:0043983	histone H4-K12 acetylation
biological_process	GO:0043981	histone H4-K5 acetylation
biological_process	GO:0043982	histone H4-K8 acetylation
biological_process	GO:0016573	histone acetylation
cellular_component	GO:0070776	MOZ/MORF histone acetyltransferase complex
cellular_component	GO:1990467	NuA3a histone acetyltransferase complex
cellular_component	GO:1990468	NuA3b histone acetyltransferase complex
cellular_component	GO:0035267	NuA4 histone acetyltransferase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000123	histone acetyltransferase complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding