Tan0001440 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCACCGCTAAGGAGATCATGGGATCCTTACAGGCGATGTTCGAACAACCGTCCTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTTTCGTATGAAGGAGGGGGCCTCTGTTAGGGAACATGTACTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACCTTTATTATGGATCTCTTCCGAAGAGTTTCCTGTCATTCCGCACTAATGCAGTGA ATGGTCACCGCTAAGGAGATCATGGGATCCTTACAGGCGATGTTCGAACAACCGTCCTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTTTCGTATGAAGGAGGGGGCCTCTGTTAGGGAACATGTACTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACCTTTATTATGGATCTCTTCCGAAGAGTTTCCTGTCATTCCGCACTAATGCAGTGA ATGGTCACCGCTAAGGAGATCATGGGATCCTTACAGGCGATGTTCGAACAACCGTCCTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTTTCGTATGAAGGAGGGGGCCTCTGTTAGGGAACATGTACTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACCTTTATTATGGATCTCTTCCGAAGAGTTTCCTGTCATTCCGCACTAATGCAGTGA MVTAKEIMGSLQAMFEQPSSSVHYDALKYVYNFRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMDLFRRVSCHSALMQ Homology
BLAST of Tan0001440 vs. NCBI nr
Match: XP_038880476.1 (uncharacterized protein LOC120072136 [Benincasa hispida]) HSP 1 Score: 110.5 bits (275), Expect = 7.1e-21 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of Tan0001440 vs. NCBI nr
Match: XP_038876370.1 (uncharacterized protein LOC120068812, partial [Benincasa hispida]) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of Tan0001440 vs. NCBI nr
Match: XP_038895904.1 (uncharacterized protein LOC120084074 [Benincasa hispida]) HSP 1 Score: 107.5 bits (267), Expect = 6.0e-20 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Tan0001440 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 1.7e-19 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.5e-20 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.5e-20 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.5e-20 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.5e-20 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0001440 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.5e-20 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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