Tan0001191 (gene) Snake gourd v1

Overview
NameTan0001191
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG11: 8278728 .. 8279130 (+)
RNA-Seq ExpressionTan0001191
SyntenyTan0001191
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTTTGATCTGCAAATCATTGCTTCCAATTCTCTACACTTTTCTACTGGTGTCTTCTCTCCATCTTCACACTTCTGCTCGAGCTGTAAGAACGCTCCTCCCGTCTCCTCGTGTCGCTTCTACGTCGTCTCCGTTATCGTCGCCATCGTTGTTGTATCGAGTTGATCTTCTTCATCTTTCTCTCAGAGCTCGGAAGCTCCCGGAAACGGCATCGTCTACTTCCTCGAGTCTTCGCCGAATACCTCGAAGCGGCCCAAATCCTACACAGAACAAGTAATGACTCTGAATCCTAGCTTAGTGTTCTGATTTGTGTTAATGTCATGTTTTGACTCATAGATTCTCTGTTTCATCTCTTGATTCATTCTTGGTACAGAATGAAGCCAAAGTTTAGAAGCTAA

mRNA sequence

ATGAAAACTTTGATCTGCAAATCATTGCTTCCAATTCTCTACACTTTTCTACTGGTGTCTTCTCTCCATCTTCACACTTCTGCTCGAGCTGTAAGAACGCTCCTCCCGTCTCCTCGTGTCGCTTCTACGTCGTCTCCGTTATCGTCGCCATCGTTGTTGTATCGAGTTGATCTTCTTCATCTTTCTCTCAGAGCTCGGAAGCTCCCGGAAACGGCATCGTCTACTTCCTCGAGTCTTCGCCGAATACCTCGAAGCGGCCCAAATCCTACACAGAACAAAATGAAGCCAAAGTTTAGAAGCTAA

Coding sequence (CDS)

ATGAAAACTTTGATCTGCAAATCATTGCTTCCAATTCTCTACACTTTTCTACTGGTGTCTTCTCTCCATCTTCACACTTCTGCTCGAGCTGTAAGAACGCTCCTCCCGTCTCCTCGTGTCGCTTCTACGTCGTCTCCGTTATCGTCGCCATCGTTGTTGTATCGAGTTGATCTTCTTCATCTTTCTCTCAGAGCTCGGAAGCTCCCGGAAACGGCATCGTCTACTTCCTCGAGTCTTCGCCGAATACCTCGAAGCGGCCCAAATCCTACACAGAACAAAATGAAGCCAAAGTTTAGAAGCTAA

Protein sequence

MKTLICKSLLPILYTFLLVSSLHLHTSARAVRTLLPSPRVASTSSPLSSPSLLYRVDLLHLSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKPKFRS
Homology
BLAST of Tan0001191 vs. NCBI nr
Match: KAG7016372.1 (hypothetical protein SDJN02_21480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 71/101 (70.30%), Postives = 79/101 (78.22%), Query Frame = 0

Query: 1   MKTLICKSLLPILYTFLLVSSLHLHTSARAVRTLLPSPRVASTSSPLSSPSLLYRVDLLH 60
           MK LICKSL+PIL +FLL+S   L T  +A R LLP PRVASTSS     S LY+VD+LH
Sbjct: 1   MKPLICKSLVPILCSFLLMS--FLPTPTQAARLLLPVPRVASTSS-----SSLYQVDVLH 60

Query: 61  -LSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKPKFRS 101
            L L ARKL ETASSTSSSLRRIPRSGPNPTQN+MKP+ RS
Sbjct: 61  LLPLTARKLHETASSTSSSLRRIPRSGPNPTQNRMKPELRS 94

BLAST of Tan0001191 vs. NCBI nr
Match: KAG7032911.1 (hypothetical protein SDJN02_06961 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.1 bits (266), Expect = 9.1e-20
Identity = 69/101 (68.32%), Postives = 75/101 (74.26%), Query Frame = 0

Query: 1   MKTLICKSLLPILYTFLLVSSLHLHTSARAVRTLLPSPRVASTSSPLSSPSLLYRVDLLH 60
           MK LICKSLLPILYTFLL+  LHLHT+A A RTLLP     S+SS         RV  LH
Sbjct: 1   MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLP-----SSSS---------RVGHLH 60

Query: 61  LSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKP-KFRS 101
           L L  RKLPETASSTSSSLR+IP+SGPNPTQNK+KP K RS
Sbjct: 61  LPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS 87

BLAST of Tan0001191 vs. NCBI nr
Match: XP_011656590.1 (uncharacterized protein LOC105435754 [Cucumis sativus] >KAE8646645.1 hypothetical protein Csa_005020 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19
Identity = 74/108 (68.52%), Postives = 80/108 (74.07%), Query Frame = 0

Query: 1   MKTLICKSLL-PILYTF-LLVSSLHLHTSARAVRTLLPSP--RVASTSSPLS---SPSLL 60
           MK LI KSLL PILYTF LL+ S HLHT  +A R LLP P   VASTS PL    S S  
Sbjct: 41  MKPLISKSLLVPILYTFLLLIFSFHLHTPTQAARMLLPFPGSHVASTSLPLPLSLSSSSS 100

Query: 61  YRVDLL-HLSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKPKFRS 101
           Y+VDLL HL   ARKL ET+SSTS+SLRRIPRSGPNPTQN+MKPK RS
Sbjct: 101 YQVDLLHHLPPAARKLGETSSSTSTSLRRIPRSGPNPTQNRMKPKLRS 148

BLAST of Tan0001191 vs. NCBI nr
Match: TYK04416.1 (uncharacterized protein E5676_scaffold409G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 8.5e-18
Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 0

Query: 1   MKTLICKSLL-PILYTF-LLVSSLHLHTSARAVRTLLPSP--RVASTSSPLS-SPSLLYR 60
           MK LI KSLL PIL+TF LL+ S HLHT  +A R L P P   VA TS PLS S S  Y+
Sbjct: 1   MKPLISKSLLVPILHTFLLLIFSFHLHTPTQAARMLFPFPGSHVAFTSLPLSLSSSPSYQ 60

Query: 61  VDLL--HLSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKPKFRS 101
           VD L  HL   ARKL ET+SSTS+SLRRIPRSGPNPTQN+MKPK RS
Sbjct: 61  VDFLLHHLPSAARKLGETSSSTSTSLRRIPRSGPNPTQNRMKPKLRS 107

BLAST of Tan0001191 vs. NCBI nr
Match: KAG6578843.1 (hypothetical protein SDJN03_23291, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-14
Identity = 56/78 (71.79%), Postives = 61/78 (78.21%), Query Frame = 0

Query: 24  LHTSARAVRTLLPSPRVASTSSPLSSPSLLYRVDLLH-LSLRARKLPETASSTSSSLRRI 83
           L T  +A R LLP PRVASTSS     S LY+VD+LH L L ARKL ETASSTSSSLRRI
Sbjct: 4   LPTPTQAARLLLPVPRVASTSS-----SSLYQVDVLHLLPLTARKLHETASSTSSSLRRI 63

Query: 84  PRSGPNPTQNKMKPKFRS 101
           PRSGPNPTQN+MKP+ RS
Sbjct: 64  PRSGPNPTQNRMKPELRS 76

BLAST of Tan0001191 vs. ExPASy TrEMBL
Match: A0A5D3C1X0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00120 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.1e-18
Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 0

Query: 1   MKTLICKSLL-PILYTF-LLVSSLHLHTSARAVRTLLPSP--RVASTSSPLS-SPSLLYR 60
           MK LI KSLL PIL+TF LL+ S HLHT  +A R L P P   VA TS PLS S S  Y+
Sbjct: 1   MKPLISKSLLVPILHTFLLLIFSFHLHTPTQAARMLFPFPGSHVAFTSLPLSLSSSPSYQ 60

Query: 61  VDLL--HLSLRARKLPETASSTSSSLRRIPRSGPNPTQNKMKPKFRS 101
           VD L  HL   ARKL ET+SSTS+SLRRIPRSGPNPTQN+MKPK RS
Sbjct: 61  VDFLLHHLPSAARKLGETSSSTSTSLRRIPRSGPNPTQNRMKPKLRS 107

BLAST of Tan0001191 vs. ExPASy TrEMBL
Match: A0A5A7SNV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004800 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.5e-15
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0

Query: 1   MKTLICKSLL-PILYTF-LLVSSLHLHTSARAVRTLLPSP--RVASTSSPLS-SPSLLYR 60
           MK LI KSLL PIL+TF LL+ S HLHT  +A R L P P   VA TS PLS S S  Y+
Sbjct: 1   MKPLISKSLLVPILHTFLLLIFSFHLHTPTQAARMLFPFPGSHVAFTSLPLSLSSSPSYQ 60

Query: 61  VDLL--HLSLRARKLPETASSTSSSLRRIPRSGPNPTQNK 94
           VD L  HL   ARKL ET+SSTS+SLRRIPRSGPNPTQN+
Sbjct: 61  VDFLLHHLPSAARKLGETSSSTSTSLRRIPRSGPNPTQNR 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7016372.11.8e-2070.30hypothetical protein SDJN02_21480, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7032911.19.1e-2068.32hypothetical protein SDJN02_06961 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_011656590.12.7e-1968.52uncharacterized protein LOC105435754 [Cucumis sativus] >KAE8646645.1 hypothetica... [more]
TYK04416.18.5e-1866.36uncharacterized protein E5676_scaffold409G00120 [Cucumis melo var. makuwa][more]
KAG6578843.11.2e-1471.79hypothetical protein SDJN03_23291, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3C1X04.1e-1866.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SNV69.5e-1565.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0001191.1Tan0001191.1mRNA