Spg039955 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACACGGCAACATCCATGTTTCAGAAGATGACCAAATTCTCGCCTAAAATCAATCAGACTTCAAGTAAACTGATCTGGAAACATAAAAGCCAGAAGAAAGTCAAGGTGTTCTTGTGGTCTTTAGCCTACCGTAGCCTAAATACTGATGATAAAATCCAAAAGAAGTTCAAAAGCTGGTACTTGGATCATCTTTTTATCCATTGTGGTTTTGCGAAGAAAGTGTGGAACTTTGTGGCTAATCTTCTGGGTATCTCCTTCTGTTTACCCAATAAAATTGATGATTGGTTAAGTGAAGGGCTGGCTGCATGGAACTTAAGGGAAAAGGCCAAGATTATGGCTGGTTGTGCCTTTAGGGCTACTCTATGGCCTTTGTGGAAGGAAAGGAACTCTAGAACCTTTGAAGACAAATCGCCTAGCTTAGATTTTTTCTGTGACAATGTTCAAAATACAGCTTCTTGGTGGATATCTCTACACAAAAAATCTTTTGGTAATTACACCTTGCTTTCGATTATTAAAGATTGGCAAGCTCTTCTGTATTAGAGTCCAGGCGAGGGCGATCTCCTTCCTCGGCCCTTAGGTTGTCTCCTTCTTTTGTGATTAATATATATCTTTGATGTTTCTTATCAAAAAAAATAATAATAATTTAGTCAAAGAAAATCTGAAGGGAAACATCGAGTCCAAATCCCAAATCTCTTCACATGATCCCTTGCACCCAAGTAGAAAATAATAATTTTAATTAAAAAAAAAACCCACCTATTCCTCCCTAACCAAATAAATGAAAGGCTGACAAAAAAAAAATCCACCAAAGGAATCCGCCCATCTCAAAAAGGAGAATTCAGAGGAACCTAATTCATACAAAAACCAAACTAAGGGCTAAAAACACACCAGAAGTCTACAGATTCCTCTACCACAAGATGCAATCTAAGTCCAACAAAACCTATTTATTACAGACGATGGATTCAAAGATGTATAAGATCCTCTATAACCTCAAATCTCTCTCCTATGACCTATCAATGTATGAAAAGAATGATAATATATATGAAGCTTGTGGGACTACTACATAGAAACCTTTTCTTTCTTGGAAGAAGTAACAAACTTGTAAATGATAGATAAAAAGGAATAAAAATGTTCAAGACTCCCCAAGGGAGAGAAAAGAAAACAAAATGACCAAAGAATAAATAAAAAGACAGATTACAAGAGCCTGAAAAAAACCAACTATCCAGAGGATCCAAAGAACACCCAACAAATGACAAAAGCAGTGACAAACTAAACACAAAAGATTTTAAGAACAAAGACAACCAATAAACAAGCCAACAAATTATCTGCTTCTTAAACCATGAGTAGTGAGATTCGCAGCATTGGGCAAGCTACTGACAATTTGATGTATATGCCAAGAAGACTTCTAATAATATAAAGTATTTAAAACAAGAACTGGATTCAAACTAATACAGGTGATCCACCTTGGTTCAGTAAGGTTTCACAGGCATCCTTGAAAATTTATCTCCACAGGTATACTTCTCATGATGCTTATATTTCATCTCTTTTCTAAGAGTCATTTGATTAATCTTCAACATTTTAGGTTTTTTAGAAATTTGAACTATTAGAAAGTAGGTGAATTTATTTTCCCTGCATGAAAGACTCTATCCCACCACAATTTTCATAACTTTGTTAGTCTCTGACTCTCTATAATTGTGCTTTTAAGTGGCAGGTGATAGTGCAAGTTTTTTTAAACAAGAAACAAAATTTTTCATTGACAAAATGAATAGAGGTTAATGCTCAAAAGATACGATACAAACTCCAGAAGGGATTGAAGATAAAACAAAAAATACCAAAAATTACAAATGAGAAATAAATGCATCCCAATTCAAGTAAATATCCTGTAAAGAAAATGTATCAAAAAGCTTGGAGAGAGAACCATGAAGAAGCTTTCATTCTTGTCGAATTCAACCAATCAAACCAAGGAATTTGTTTGTTTTCAAAAATTCTCAAATTACTCTCCATCCACAATTCCGAAAGAAGAGCTTTAACTACACTTATCCATAAAAGATGAGGTTTCATCACCAAAGAAGGCCCAAGGATTATCTGATGAAGGTTATCTTTCAAATTGAGAGAGAAAACCCAAGAAATCTTGAATAATCCAAACAGCTTGTAACAACACTTCAATTTTGAAGTGTAGAGATCGATCACCCTTCAATGAGCTTTAATCGCATTTATCCATAAAATTGATAGCGCAAGATGGATGGGATATGGATCACATGCCTCCAAATTCACATCATGTCTGCAGATTGTAGTTTTTAGTTTTTAGAGGTAGAGATGGTATGAATGGGGATCATCTCTAATTGCAATGTTCTGTCGCTTATAACTCGTGAGAAAAGCTACCTTCCATCTTCAGTATCAGTTGGGGCAAAGAGTTTGAGAAGGAATCCAAGAAAGAAAGATCTTTTTCGTTTTTCTATTTTTCCAATCATTTGGTATATTTGAAAACAAATGAATTCTAGAAACTCTCAGTATTGTCTGGAGGAAAACTATCTTGTGCGGCTTAAAATGTTGTTTCTTATGTCTTTGTGTGCATCTATGACAAAGTTCTTTTTATCTAGATGTTCCTCTTTTTCTTAATCTTCACGCTAGGATTTCATGTTTAAATACATGATCTTCTATTTGAAGAGACTTACTCTCTTATTTCCTTTTTTTTAATTGAAAAACTGAACTTTCATATAGGCAAATCAAACAATACAAACAGTGAATTCGACCCCACAACAAAAGAAGCAAGAAAGAAAAAGAAAAATAGAGCCCAACAAAAATACAAAAATTACAAGGGCTCTAATAAAAAGGGGAAAAGGCAGTGCACAGATAAAATGTAACCGAGATCAGATTAAAAAATGAAGGTTTCAAATTTTAAAAATGCTCAAATCATAAGTGAATGACCCAAATCATAAATGGATGACCTGAACTTGGGATACAAAGGACAAGCCAGCAGCTTCAATAGTCAAAAGAAGTCCATGCAAAGACCATGTCTGCAAACTGGTAATTGAACTCCGAGACAGCATAGATATTGAATTCACTGTTGCCGTAACTAATGTTGACAGAGCCATCCCTCCTGCACTGAAGGTAAAGGAAAATGTATAGTTGAGGACATTTTGAAATATAAGTACATCAGCTCAGCACAAAAGGAAACACTTTTTTTAACAAAAAATGAACTTTTCATCGATAGAGAAGAAGGGAAAAAAAAAAAGGTTCAAGGATGCAAACTCCTGTAAGGGAGTGAAAAGAAAATCAAATTAACCAAACTAATAAAGAAAAGATCTTCAAACATTTCATGAGTCGACATACTTTTTTTAAAAAAAGGATTTAAGAATGCCCAGAAAAGATCTAGGATGTCTGAGAAGAAAAATTGAGAAACCAACAAGCCAAAGTCATCCCACCGAGCTACAAAAACTGCATCATGGTTCAGCGCCCAAAAAGAATTCGCTGGAAAGAAGTGCAGCAATAGAGCCCTATCCCCGCTGGTCTGTTCTTTGTGTTGGAGGAATGCTGAGTCTTTGGACCACATTTTTCTCCATTGCCCTTTTGCTTATGCAGCTTGGAGGTGGCTGTTGGGGGAATTTAACATCTATGTTTCTTTCCCTGATAAGATTGATGTGTGGCTGGATGAAGTGTTATCGGGTTGAAATTTTGAAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAATCGTCGGGTCTTTGAAGATAAGAGCTCTCCGTTTGATTCCTTTTGTTCTAATGTTAAATATTCTGCTTCTTGGTGGTGTACAAAGCACAGGAAATTCTTTTGTAATTACAACTTGTCCATGATAGTTTCAAATTGGACTGCCTTTGTTTAG ATGTACACGGCAACATCCATGTTTCAGAAGATGACCAAATTCTCGCCTAAAATCAATCAGACTTCAAGTAAACTGATCTGGAAACATAAAAGCCAGAAGAAAGTCAAGGTGTTCTTGTGGTCTTTAGCCTACCGTAGCCTAAATACTGATGATAAAATCCAAAAGAAGTTCAAAAGCTGGTACTTGGATCATCTTTTTATCCATTGTGGTTTTGCGAAGAAAGTGTGGAACTTTGTGGCTAATCTTCTGGGTATCTCCTTCTGTTTACCCAATAAAATTGATGATTGGTTAAGTGAAGGGCTGGCTGCATGGAACTTAAGGGAAAAGGCCAAGATTATGGCTGGTTGTGCCTTTAGGGCTACTCTATGGCCTTTGTGGAAGGAAAGGAACTCTAGAACCTTTGAAGACAAATCGCCTAGCTTAGATTTTTTCTGTGACAATGTTCAAAATACAGCTTCTTGGTGGATATCTCTACACAAAAAATCTTTTGGTGATCCACCTTGGTTCAGTAAGGTTTCACAGGCATCCTTGAAAATTTATCTCCACAGCATAGATATTGAATTCACTGTTGCCGTAACTAATGTTGACAGAGCCATCCCTCCTGCACTGAAGCTTGGAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAATCGTCGGGTCTTTGAAGATAAGAGCTCTCCGTTTGATTCCTTTTGTTCTAATGTTAAATATTCTGCTTCTTGGTGGTGTACAAAGCACAGGAAATTCTTTTGTAATTACAACTTGTCCATGATAGTTTCAAATTGGACTGCCTTTGTTTAG ATGTACACGGCAACATCCATGTTTCAGAAGATGACCAAATTCTCGCCTAAAATCAATCAGACTTCAAGTAAACTGATCTGGAAACATAAAAGCCAGAAGAAAGTCAAGGTGTTCTTGTGGTCTTTAGCCTACCGTAGCCTAAATACTGATGATAAAATCCAAAAGAAGTTCAAAAGCTGGTACTTGGATCATCTTTTTATCCATTGTGGTTTTGCGAAGAAAGTGTGGAACTTTGTGGCTAATCTTCTGGGTATCTCCTTCTGTTTACCCAATAAAATTGATGATTGGTTAAGTGAAGGGCTGGCTGCATGGAACTTAAGGGAAAAGGCCAAGATTATGGCTGGTTGTGCCTTTAGGGCTACTCTATGGCCTTTGTGGAAGGAAAGGAACTCTAGAACCTTTGAAGACAAATCGCCTAGCTTAGATTTTTTCTGTGACAATGTTCAAAATACAGCTTCTTGGTGGATATCTCTACACAAAAAATCTTTTGGTGATCCACCTTGGTTCAGTAAGGTTTCACAGGCATCCTTGAAAATTTATCTCCACAGCATAGATATTGAATTCACTGTTGCCGTAACTAATGTTGACAGAGCCATCCCTCCTGCACTGAAGCTTGGAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAATCGTCGGGTCTTTGAAGATAAGAGCTCTCCGTTTGATTCCTTTTGTTCTAATGTTAAATATTCTGCTTCTTGGTGGTGTACAAAGCACAGGAAATTCTTTTGTAATTACAACTTGTCCATGATAGTTTCAAATTGGACTGCCTTTGTTTAG MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYLDHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVSQASLKIYLHSIDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDSFCSNVKYSASWWCTKHRKFFCNYNLSMIVSNWTAFV Homology
BLAST of Spg039955 vs. NCBI nr
Match: TYK31299.1 (protein FAM91A1 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-17 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of Spg039955 vs. NCBI nr
Match: ONI36148.1 (hypothetical protein PRUPE_1G572100 [Prunus persica]) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16 Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 0
BLAST of Spg039955 vs. NCBI nr
Match: VVA21329.1 (Hypothetical predicted protein [Prunus dulcis]) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-15 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of Spg039955 vs. NCBI nr
Match: CAN62833.1 (hypothetical protein VITISV_012130 [Vitis vinifera]) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15 Identity = 69/289 (23.88%), Postives = 124/289 (42.91%), Query Frame = 0
BLAST of Spg039955 vs. NCBI nr
Match: RVW15141.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-15 Identity = 54/181 (29.83%), Postives = 88/181 (48.62%), Query Frame = 0
BLAST of Spg039955 vs. ExPASy TrEMBL
Match: A0A5D3E632 (Protein FAM91A1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005970 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of Spg039955 vs. ExPASy TrEMBL
Match: A5AUH3 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_012130 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.3e-16 Identity = 69/289 (23.88%), Postives = 124/289 (42.91%), Query Frame = 0
BLAST of Spg039955 vs. ExPASy TrEMBL
Match: A0A438BVX7 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_1293 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-15 Identity = 54/181 (29.83%), Postives = 88/181 (48.62%), Query Frame = 0
BLAST of Spg039955 vs. ExPASy TrEMBL
Match: A0A438GPP0 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_8 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-15 Identity = 51/181 (28.18%), Postives = 91/181 (50.28%), Query Frame = 0
BLAST of Spg039955 vs. ExPASy TrEMBL
Match: A5BPI6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008538 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-15 Identity = 51/181 (28.18%), Postives = 91/181 (50.28%), Query Frame = 0
BLAST of Spg039955 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06 Identity = 41/146 (28.08%), Postives = 60/146 (41.10%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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