Spg039278 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039278
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Defective in cullin neddylation protein
Location	scaffold10: 41195211 .. 41200386 (+)
RNA-Seq Expression	Spg039278
Synteny	Spg039278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATTTAGTAACCGCAATGGATGATCTAAAGAAATCGTTGGATGAATTGTTGAGACTGTACCACACACTTCAACAACCATTATTGTCGGATGAATTTTTGAGAGTGTACCACACATTTCAACAACGATTAGAAACGGTGCAATCCGCCGATGATTTCCTGAATGACCCGATCACATTTCAACAAATATTAGAAACGGTGCAATCCGCCAATGGTTTCCTGAATGACCCGATCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCCAAACTTCTTCAGTACGCCCAGATGATCAAGAAATCCAAGATGGTGGCGGTGGCCAGATCCGTTGCAGACTGCGAAGTAGGAACCCCAATAATCTTGAAGGGTAGGATTACGAAGGAGACGGAGACGGGTAGTCTATGGACAGTTTTAAGAAGATTCTAAGCGATGTTTTGTGTGCTCGACGAGGAGTTTTCGTTGTTGGCTGGTCTTTTTTAAGTTCAATGTTTGAGATTTTTTTTGTTCGGTTTTTGGTTTAATTTGTGAGCTTCTAAGTGGTTGTTTTTATCATTGAATGAGTCTCATGGTGAAACTTGAATTTTGGCCCTTTGAGTTTTCTTGATTGGGTTGCCAATTTTTGGGCTCAATTTTGAGCGTTTTGGTTGGACTTTTAGTTCCCTACGGCTTTAATTTCTAATTCCACCCTTTTCTCTTCAATCATCTCTGATTCTATCGACGATTTACTACTATCAATTTCTTAGTAAACATTCATTTCGTTGAACCTTTAAAATCTCTCTTTATTTTCTGCCCTTGGATTATCTGTTGCAATATCCCACTCGATTTTTACTGTTTTTCATAGAAATTTATGGCTGCTTGCTGATGTATGCTAGTTTAGAAGATGTAGGTATTTCAAAGATTGGATGTTTTTATTCATCTTTCTATAGATGGATGGTTAGTTGCTTAGTGCTTTTTAAGAATTTAAGATGTATTTGCTCCAGAGAAGTCCAAGTGCTCTAATTTTTTTGGACCTGCATTAATAGTGTGGATGATAAAGAATGTAAAAGGTTAAGTTTACCATGCTTCTTTTAGAAGATTATTTGACACATTAGGGTCAATGAGTATGTTCTTTTCTGGTCAGTCGGCTTCCTTGGATAGTTATGAATTGATTTTTGTTTTTTCAAATGTTTGCACTGTTAGTACTTGGTGGTTGTCGGAGGAATAATCCAAGAATTAGTAACTTGTATTATGATTTCATATTTGTCTGAACTGCAACCCCTTTGAGGGAGGACTTTGAGTCCTACCTAATTGTTTTGGATCGATAAAACTAATAGTTTTATACACATGTCTGAGAAATTAAATAATTCCCCTTTGGTTTCCCTTTTCTTTTAGATGACAACAAAAGAGTAAAGGAAATAAGAAAATGTGGTGTTGGTGAAACCGAGTGGGAATGTTCAACACTATTGAAAGAAAGAAAATAGTATGATGTTCTGGCTCTTGATCGTTTAGAATCTAGTTGCTTATATATGGTGATCAATTTTATGTCAATGTAACATGAATAAACGATTATCATGTGCATGGGTTCTTTCTGAGCACGGTTACACACCTCATTAATTAGACTTGAATTAAGTGAACTCTAGTCTGATGTGTATCGCATTTAGAACTCAGATTAGCAATATAATGTAGTCTTAACTTGTTTACTAACTTGTTTATAGATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGTTGAAACACAAATGGCTAAAAGTTTAAAGCAAGCACTTGCAGATCTATTAATATATGTGCAATCATCACTGCAGATGGGGTATATTCACTCTGTTTTATACAAGTCTATTTTTTGTCCTTCCAAAATAAAACATATTTATTATTTTCTAAACATTTTTAACTGAAAGATGAATGAAATTAAGATATTTTATCAACTCAATTATCAAACTAAGACGATTTTTAATATTGTAGACATAGATGCTTACTAGTTTGATTTCACTTCATTCTCATTTGGCATAGTTTTTTCTAGCAGTTCAATAAAAGAAACGTTACATGGAAATAAACTGACACAGGTGCAGGTGCCAAATTACAAGTTGTTAAATGAGGCCATCAAATGTCGTTTTTGTACTTTTGTAGCTTTACATCTTAAGAAATAGCAGTTGATTGCAATATAAAAGATATATATTTTTTTTAATCTCGATTACCTGAAAAGCCTAAATTACATTTTCAGGAAATTAATCATTTATGAACTATCAAAGCTGATGTCATATCTAAACTTCATGGTAAACTCTTCCTTCCTATCATTTTTCCTGGTTTCCTACTCCAATGTAGTTTCCTTCAATTTGGAAAACTTTTCGTATTAGCTAGTGACAATATTATATTTTCAGTAAGATTCAGTGTTTTATTCATGTGCTTCAGTTAACTTTAAGAACTATGATTGAAAATTTTTCTACTATGTTCTTTGAATTTGACAATTCTATTTTGTAGGTAGACATAGACTTGTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAAATGGTCAAAAGAATATCAGTCAGATTCCTTCTTTTCTTCTTTCTTTTCTGTACTTTATGAACTCAAGGACACGGTAATACAACCTATAGAATATCTTTTGTTCAAATAAAGTCACTTTTCATTCATTTCCTTTTTGGTCGTAAATTTAGCTTCTATGAACGAGCTTTAAATAAAATGTATAATGATAATAATCTGGAAACCAAAATTTCTATCTGAAGCTATTTTCATCAACGTGGGTTTATATGGCCTAACAATTATGAAATATACTTACATTCTAAATACCCATGAACGAACATTTCTTTGTTATTGCTTGCCATCAGATTGTTTTGAGCTTCATAACCAAACTTTTATGAAATATGTTTATGTATTTATAGGCTTCCTTTGATTTTGAATTTAAAAAGATAATTCTTTTTCATAATTTTGGGTGGCTTGGCAGATGGTGATTGTCTTTCATCATTATTTTCTTCGTGGGGCTGGATTGTATCTGATGGTGTAAGGATTGGTCTTCTCTTATGATGAACCTTGAAACAAAATAGTAAAGGATAAGAGGAAGTATTAAACATGCATATTAATTGAATACAACACAGAGTTAAGCTTTCTCCATTCATTTCTTGCATCTTTCATCACGATTGAGTATGATTGCATTTTAGTTGGTACAAGACAGTCATTTTTATGTTCTGCAATTCAATCAAGTGCCTAATGAAAAAGGTAGTTTTTAGTAGTTTTTTAGTTTGAGTTTTCTTTTGAACCATTTCTGTTCTTTAGTATTGATTTTCTTGATGCCTTATGTGATTGTTTGAAGTGTACGCTAAGACTAATTGAGTTGTCCATAACAAGTTAGTGAGTCATTTATCTCAAGAAAAATACATAGAAACTGTGATGTTGGATTGGAGAAACTATTGAATTCCACCTCAAGTTCTTGCGCCTAGTAGGAGATGTTTTCTGCAAATTCTTTAGCAAGCTTTTACTTTGACCTTGCATCTTTGCATTTGACAGAAAGCTTACCATTTGAAAGTCATAATTCTTAGGATAGTTAAGTATTTTTTGCAACCTTTAACTATTGGATAGAGACCTCAAAATAAAGACTCCAACTCATTTTCATTCATGAAAACTCACAATTTTACTTATTGTGTATCTCACTTTGTTACTTGAAGACTCAATTAGTGAAGATCAAAATCAACTCTCTTTGGTCGATGTTATCTTGACGACTTTGAGGAGTTTCTAAGCTTTGTTTCACGTGCCAGGTGAGAAGTTTGTTCTGTTTCTGGTGGTTGGGTTTTAATCTTGGCTTTTTCTAGTTCAATGTTTTGTTGGGTGGTTGTTTTATTAGCTTAATTTTGAGATTTTTGGTTTGGGAGTTTCTAAGTGGTTGTTTTTGCCATCGAATGGAGATCATGGTGAGACTTGAACCTTGGCCTTTTATCCTCTATGAAATTTGGTAATTGTATGAGTTTTCTTTGGTTAGAAAGCATATTAATGGTTGTGTTTTGAATCCATCTTAGAATGGCGATTTATTGGTTCTTGTTTATTGACTTGAATTTCTATTACGTTAGAATGGTGATTTATTAGTTGTGTTCTGAATCCATGTTAGTTGTGTTTTGAAGAATAAGGTAGGTTTGTGCAGTTCAGGGGAGAAAATGCTAGAATAACTCTTGCATAATAAAACTACGTTTTGAACAAGGAGAATATAGACAATATGTTAATCATGATTAGAGAGGCTAATCTTTGATTGTTCTTGTTTAGACTTAGGATATCAAATGCTTGATTAGGACATGTGTACATTTGTTTTGGAGTGTTTTCTCTTGCATTCTTGAGGTATTTGATGCTGGAAATTCAAAACTAGGATACTTTAAATTTAAGTTTTGTCTGCTTTGGAGGGAGGGGGGAGGGGGCAGTTATCACAATATGAAGATACTTGAATTTTTGTGGTTGTTTATGTTAATTTGGATCACGGGTATAGTTTCACATCAACAAATCTTCTACCTAATATATTTCTAAGTAGAGTAATCAAACGATCTTTTTTCCTCTTGATTGCTTTTGTTTTATGAGTTTGGAGTTGTTGATGAATTCTTTATACTTGGTTTTGTTTCTACCTAATTTTTTTCGTTATATGGTTAGCTTCTTGTGTCATGAGGGTTGAAGCTTAGGGTAAGCAATATGTTTGTTTGATTCTATTTTCTTTTTCTTTTTGTACTATAATTATTGGTGTCATTTTCTACCTTGTTTCAAAAAGGCAAAAGATATTTCTCTTTGTTGAATTGGATTTGGTGCAGATGGTTTCAAAAAGACCCAAAAGATATTACACTTAAATCTTGGCTTTTTGAGTTTAAATATTTGGTTGGGTTTTTGGTTTGGAAGTTTCTAAGAGGTTGTTTTTTCCATTGAATGGAGCTCATGATGACACTTAAATCGTGGGCTTTTGCGTTTTTATTTTTTGAGTTTCTTGTGTAATTTTTTTTTTCTAGAGTTATTTAGTTCATCTCAACTCTAGGTTTTATAGATTATGTTCTATAGGTTTGTTGGGTGTCATTTTCTTCCTGCTCTGATGATACTACTGTCAAAGTTTGGGACTTTGCTCGGTGCCAAGAAGAGCGTTCTTTGTCTGGTAATGTGCTTTGA

mRNA sequence

ATGAATAATTTAGTAACCGCAATGGATGATCTAAAGAAATCGTTGGATGAATTGTTGAGACTGTACCACACACTTCAACAACCATTATTGTCGGATGAATTTTTGAGAGTGTACCACACATTTCAACAACGATTAGAAACGGTGCAATCCGCCGATGATTTCCTGAATGACCCGATCACATTTCAACAAATATTAGAAACGGTGCAATCCGCCAATGGTTTCCTGAATGACCCGATCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCCAAACTTCTTCAGTACGCCCAGATGATCAAGAAATCCAAGATGGTGGCGGTGGCCAGATCCGTTGCAGACTGCGAAATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGTTGAAACACAAATGGCTAAAAGTTTAAAGCAAGCACTTGCAGATCTATTAATATATGTGCAATCATCACTGCAGATGGGGTATATTCACTCTGTAGACATAGACTTGTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAAATGGTCAAAAGAATATCAATGGTGATTGTCTTTCATCATTATTTTCTTCGTGGGGCTGGATTGTATCTGATGGTGTTTGTTGGGTGTCATTTTCTTCCTGCTCTGATGATACTACTGTCAAAGTTTGGGACTTTGCTCGGTGCCAAGAAGAGCGTTCTTTGTCTGGTAATGTGCTTTGA

Coding sequence (CDS)

ATGAATAATTTAGTAACCGCAATGGATGATCTAAAGAAATCGTTGGATGAATTGTTGAGACTGTACCACACACTTCAACAACCATTATTGTCGGATGAATTTTTGAGAGTGTACCACACATTTCAACAACGATTAGAAACGGTGCAATCCGCCGATGATTTCCTGAATGACCCGATCACATTTCAACAAATATTAGAAACGGTGCAATCCGCCAATGGTTTCCTGAATGACCCGATCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCCAAACTTCTTCAGTACGCCCAGATGATCAAGAAATCCAAGATGGTGGCGGTGGCCAGATCCGTTGCAGACTGCGAAATATTCGATCTCAAAATGGCTTTTGTCATGGGAATGAAGACTCTGGACATGTTGAAACACAAATGGCTAAAAGTTTAAAGCAAGCACTTGCAGATCTATTAATATATGTGCAATCATCACTGCAGATGGGGTATATTCACTCTGTAGACATAGACTTGTCTGAATTTTCACGCTTCTACGAGTTTGTTTTCTTTGTGTGCCGTGAAAATGGTCAAAAGAATATCAATGGTGATTGTCTTTCATCATTATTTTCTTCGTGGGGCTGGATTGTATCTGATGGTGTTTGTTGGGTGTCATTTTCTTCCTGCTCTGATGATACTACTGTCAAAGTTTGGGACTTTGCTCGGTGCCAAGAAGAGCGTTCTTTGTCTGGTAATGTGCTTTGA

Protein sequence

MNNLVTAMDDLKKSLDELLRLYHTLQQPLLSDEFLRVYHTFQQRLETVQSADDFLNDPITFQQILETVQSANGFLNDPIQGGGGGGGGGQTSSVRPDDQEIQDGGGGQIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMGYIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVCWVSFSSCSDDTTVKVWDFARCQEERSLSGNVL

Homology

[Close]

BLAST of Spg039278 vs. NCBI nr
Match: XP_038890438.1 (uncharacterized protein LOC120080000 isoform X2 [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-24
Identity = 76/142 (53.52%), Postives = 91/142 (64.08%), Query Frame = 0


Query: 115 NIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG------------YIHS 174
           NIRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG            Y++ 
Sbjct: 6   NIRSQNGFCHGNEESGQVETQMAKSPKQALAELLIYVQSSLQMGNSIVYELSKLMSYLNF 65

Query: 175 VDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGV----CWVSF---- 234
           + +D SEFSRFYEFVFFVCRENGQKNI    +S    +W  +++        W  F    
Sbjct: 66  M-VDFSEFSRFYEFVFFVCRENGQKNIT---VSMAVRAWRLVLNGRFRLLNQWCDFVENN 125

[Close]

BLAST of Spg039278 vs. NCBI nr
Match: XP_038890437.1 (uncharacterized protein LOC120080000 isoform X1 [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--------- 167
           QI  +  +IRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG         
Sbjct: 17  QIYRQYCDIRSQNGFCHGNEESGQVETQMAKSPKQALAELLIYVQSSLQMGNSIVYELSK 76

Query: 168 ---YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGV----CW 227
              Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S    +W  +++        W
Sbjct: 77  LMSYLNFM-VDFSEFSRFYEFVFFVCRENGQKNIT---VSMAVRAWRLVLNGRFRLLNQW 136

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT  +V  F+RC  E
Sbjct: 137 CDFVENNQRHNISEDTWQQVLAFSRCVHE 161

[Close]

BLAST of Spg039278 vs. NCBI nr
Match: XP_038890439.1 (DCN1-like protein 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-24
Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--------- 167
           QI  +  +IRSQNGFCHGNE+SG VETQMAKS KQALA+LLIYVQSSLQMG         
Sbjct: 17  QIYRQYCDIRSQNGFCHGNEESGQVETQMAKSPKQALAELLIYVQSSLQMGNSIVYELSK 76

Query: 168 ---YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGV----CW 227
              Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S    +W  +++        W
Sbjct: 77  LMSYLNFM-VDFSEFSRFYEFVFFVCRENGQKNIT---VSMAVRAWRLVLNGRFRLLNQW 136

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT  +V  F+RC  E
Sbjct: 137 CDFVENNQRHNISEDTWQQVLAFSRCVHE 161

[Close]

BLAST of Spg039278 vs. NCBI nr
Match: XP_022955115.1 (uncharacterized protein LOC111457165 isoform X3 [Cucurbita moschata])

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-22
Identity = 75/149 (50.34%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD- 167
           QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +  
Sbjct: 8   QIYHQYCGIRSQNGLCHGNGGFGHVETQMAKSSKQALAELLIYVQSSLHTGNSILHELSK 67

Query: 168 --------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC-----W 227
                   +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       W
Sbjct: 68  LMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIT---VGRAIKAWR-LVLDGRFRLLNQW 127

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT ++V  F+RC  E
Sbjct: 128 CDFVENNQRHNISEDTWLQVLAFSRCVHE 152

[Close]

BLAST of Spg039278 vs. NCBI nr
Match: KAG6602497.1 (DCN1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-22
Identity = 75/149 (50.34%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD- 167
           QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +  
Sbjct: 27  QIYHQYCGIRSQNGLCHGNGGFGHVETQMAKSSKQALAELLIYVQSSLHTGNSILHELSK 86

Query: 168 --------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC-----W 227
                   +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       W
Sbjct: 87  LMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIT---VGRAIKAWR-LVLDGRFRLLNQW 146

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT ++V  F+RC  E
Sbjct: 147 CDFVENNQRHNISEDTWLQVLAFSRCVHE 171

[Close]

BLAST of Spg039278 vs. ExPASy Swiss-Prot
Match: Q9MBG8 (Defective in cullin neddylation protein AAR3 OS=Arabidopsis thaliana OX=3702 GN=AAR3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-07
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MG 167
           +I  R   IRS    C+     G  E+Q     K+A+  LL  V++  Q           
Sbjct: 14  EIYRRFCAIRSGQQLCNKKPCDGE-ESQRFNLSKEAITQLLYLVENKFQARNSIFDELFK 73

Query: 168 YIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGV----CWV 227
            +  +D  +D +EF+ FY+FVFF+CRENGQKNI    +S   ++W  +++        W 
Sbjct: 74  LMSRLDLMVDFTEFTCFYDFVFFMCRENGQKNIT---ISRAITAWKLVLAGRFRLLNRWC 133

Query: 228 SF------SSCSDDTTVKVWDFARCQEE 235
            F       + S+DT  +V  F+RC  E
Sbjct: 134 DFIEKNQRHNISEDTWQQVLAFSRCVHE 157

[Close]

BLAST of Spg039278 vs. ExPASy Swiss-Prot
Match: Q6NLV4 (Flowering time control protein FY OS=Arabidopsis thaliana OX=3702 GN=FY PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-04
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 212 VSFSSCSDDTTVKVWDFARCQEERSLSGN 241
           + F SCSDDTTVKVWDF +C +E SL+G+
Sbjct: 220 LKFCSCSDDTTVKVWDFTKCVDESSLTGH 248

[Close]

BLAST of Spg039278 vs. ExPASy TrEMBL
Match: A0A6J1GU86 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111457165 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 75/149 (50.34%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD- 167
           QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +  
Sbjct: 8   QIYHQYCGIRSQNGLCHGNGGFGHVETQMAKSSKQALAELLIYVQSSLHTGNSILHELSK 67

Query: 168 --------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC-----W 227
                   +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       W
Sbjct: 68  LMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIT---VGRAIKAWR-LVLDGRFRLLNQW 127

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT ++V  F+RC  E
Sbjct: 128 CDFVENNQRHNISEDTWLQVLAFSRCVHE 152

[Close]

BLAST of Spg039278 vs. ExPASy TrEMBL
Match: A0A6J1GSP1 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111457165 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 75/149 (50.34%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD- 167
           QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +  
Sbjct: 8   QIYHQYCGIRSQNGLCHGNGGFGHVETQMAKSSKQALAELLIYVQSSLHTGNSILHELSK 67

Query: 168 --------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC-----W 227
                   +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       W
Sbjct: 68  LMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIT---VGRAIKAWR-LVLDGRFRLLNQW 127

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT ++V  F+RC  E
Sbjct: 128 CDFVENNQRHNISEDTWLQVLAFSRCVHE 152

[Close]

BLAST of Spg039278 vs. ExPASy TrEMBL
Match: A0A6J1GUA1 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111457165 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 75/149 (50.34%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--YIHSVD- 167
           QI  +   IRSQNG CHGN   GHVETQMAKS KQALA+LLIYVQSSL  G   +H +  
Sbjct: 8   QIYHQYCGIRSQNGLCHGNGGFGHVETQMAKSSKQALAELLIYVQSSLHTGNSILHELSK 67

Query: 168 --------IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC-----W 227
                   +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       W
Sbjct: 68  LMSYLNLMVDFSEFSRFYEFVFFVCRENGQKNIT---VGRAIKAWR-LVLDGRFRLLNQW 127

Query: 228 VSF------SSCSDDTTVKVWDFARCQEE 235
             F       + S+DT ++V  F+RC  E
Sbjct: 128 CDFVENNQRHNISEDTWLQVLAFSRCVHE 152

[Close]

BLAST of Spg039278 vs. ExPASy TrEMBL
Match: A0A0A0KU82 (Defective in cullin neddylation protein OS=Cucumis sativus OX=3659 GN=Csa_5G636560 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.1e-22
Identity = 77/150 (51.33%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--------- 167
           QI  +  +IRSQNG+ HGNEDSG+ ETQM KS KQALA+LLIYVQSSLQMG         
Sbjct: 17  QIYRQYCDIRSQNGY-HGNEDSGNAETQMCKSSKQALAELLIYVQSSLQMGNSVVYELSK 76

Query: 168 ---YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC----- 227
              Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +S    +W  +V DG       
Sbjct: 77  LMSYLNFM-VDFSEFSRFYEFVFFVCRENGQKNIT---VSMAVRAWR-LVLDGRFRLLNQ 136

Query: 228 WVSF------SSCSDDTTVKVWDFARCQEE 235
           W  F       + S+DT  +V  F+RC  E
Sbjct: 137 WCDFVENNQRHNISEDTWQQVLAFSRCVHE 160

[Close]

BLAST of Spg039278 vs. ExPASy TrEMBL
Match: A0A6J1BYJ7 (Defective in cullin neddylation protein OS=Momordica charantia OX=3673 GN=LOC111006635 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.7e-22
Identity = 76/150 (50.67%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQMG--------- 167
           QI  +  +IRSQNGFC GNEDS HVETQ+AKS K+ALA LL YVQSSLQMG         
Sbjct: 17  QIYRQYCDIRSQNGFCCGNEDSRHVETQIAKSSKEALAALLKYVQSSLQMGNSIVYELSK 76

Query: 168 ---YIHSVDIDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGVC----- 227
              Y++ + +D SEFSRFYEFVFFVCRENGQKNI    +     +W  +V DG       
Sbjct: 77  LMSYLNLM-VDFSEFSRFYEFVFFVCRENGQKNIT---VHRAVKAWR-LVLDGRFRLLNQ 136

Query: 228 WVSF------SSCSDDTTVKVWDFARCQEE 235
           W +F       + S+DT  +V  F+RC  E
Sbjct: 137 WCNFVENNQRHNISEDTWQQVLAFSRCVHE 161

[Close]

BLAST of Spg039278 vs. TAIR 10
Match: AT3G28970.1 (Domain of unknown function (DUF298) )

HSP 1 Score: 56.6 bits (135), Expect = 3.2e-08
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 108 QIRCRLRNIRSQNGFCHGNEDSGHVETQMAKSLKQALADLLIYVQSSLQ---------MG 167
           +I  R   IRS    C+     G  E+Q     K+A+  LL  V++  Q           
Sbjct: 14  EIYRRFCAIRSGQQLCNKKPCDGE-ESQRFNLSKEAITQLLYLVENKFQARNSIFDELFK 73

Query: 168 YIHSVD--IDLSEFSRFYEFVFFVCRENGQKNINGDCLSSLFSSWGWIVSDGV----CWV 227
            +  +D  +D +EF+ FY+FVFF+CRENGQKNI    +S   ++W  +++        W 
Sbjct: 74  LMSRLDLMVDFTEFTCFYDFVFFMCRENGQKNIT---ISRAITAWKLVLAGRFRLLNRWC 133

Query: 228 SF------SSCSDDTTVKVWDFARCQEE 235
            F       + S+DT  +V  F+RC  E
Sbjct: 134 DFIEKNQRHNISEDTWQQVLAFSRCVHE 157

[Close]

BLAST of Spg039278 vs. TAIR 10
Match: AT5G13480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 212 VSFSSCSDDTTVKVWDFARCQEERSLSGN 241
           + F SCSDDTTVKVWDF +C +E SL+G+
Sbjct: 220 LKFCSCSDDTTVKVWDFTKCVDESSLTGH 248

[Close]

BLAST of Spg039278 vs. TAIR 10
Match: AT5G13480.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 0


Query: 212 VSFSSCSDDTTVKVWDFARCQEERSLSGN 241
           + F SCSDDTTVKVWDF +C +E SL+G+
Sbjct: 226 LKFCSCSDDTTVKVWDFTKCVDESSLTGH 254

The following BLAST results are available for this feature:

BLAST of Spg039278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890438.1	1.0e-24	53.52	uncharacterized protein LOC120080000 isoform X2 [Benincasa hispida]	[more]
XP_038890437.1	1.7e-24	51.68	uncharacterized protein LOC120080000 isoform X1 [Benincasa hispida]	[more]
XP_038890439.1	1.7e-24	51.68	DCN1-like protein 2 isoform X3 [Benincasa hispida]	[more]
XP_022955115.1	2.8e-22	50.34	uncharacterized protein LOC111457165 isoform X3 [Cucurbita moschata]	[more]
KAG6602497.1	2.8e-22	50.34	DCN1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg039278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MBG8	4.5e-07	31.08	Defective in cullin neddylation protein AAR3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6NLV4	2.1e-04	65.52	Flowering time control protein FY OS=Arabidopsis thaliana OX=3702 GN=FY PE=1 SV=...	[more]

BLAST of Spg039278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GU86	1.3e-22	50.34	Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1GSP1	1.3e-22	50.34	Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1GUA1	1.3e-22	50.34	Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KU82	5.1e-22	51.33	Defective in cullin neddylation protein OS=Cucumis sativus OX=3659 GN=Csa_5G6365...	[more]
A0A6J1BYJ7	6.7e-22	50.67	Defective in cullin neddylation protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Spg039278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28970.1	3.2e-08	31.08	Domain of unknown function (DUF298)	[more]
AT5G13480.1	1.5e-05	65.52	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G13480.2	1.5e-05	65.52	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..106
None	No IPR available	PANTHER	PTHR12281:SF31	DEFECTIVE IN CULLIN NEDDYLATION PROTEIN	coord: 108..189
IPR014764	Defective-in-cullin neddylation protein	PANTHER	PTHR12281	RP42 RELATED	coord: 108..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039278.1	Spg039278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding