Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCACCATTTTGTTAGCTGGTCCACAGCTGATGGAGGCAGCCAGGGTTATGAAAGGAGAGAAATGGATGGAGGACAAGGAAGATAATAGGCCTTTTGTGTTGCCTATTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCTGGCCAAAGCAACGGTCGATGCACCCTCCAGACGATGAATGTTGCAGGTGGTCGTTTCGTTCACGCGCCGCCTGCTATCCCCGAGTCGGCGCTCGTTGCCTCGGCTGCTCAAAGCTCTTGA
mRNA sequence
ATGTTCACCATTTTGTTAGCTGGTCCACAGCTGATGGAGGCAGCCAGGGTTATGAAAGGAGAGAAATGGATGGAGGACAAGGAAGATAATAGGCCTTTTGTGTTGCCTATTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCTGGCCAAAGCAACGGTCGATGCACCCTCCAGACGATGAATGTTGCAGGTGGTCGTTTCGTTCACGCGCCGCCTGCTATCCCCGAGTCGGCGCTCGTTGCCTCGGCTGCTCAAAGCTCTTGA
Coding sequence (CDS)
ATGTTCACCATTTTGTTAGCTGGTCCACAGCTGATGGAGGCAGCCAGGGTTATGAAAGGAGAGAAATGGATGGAGGACAAGGAAGATAATAGGCCTTTTGTGTTGCCTATTATTCAAGTCCTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCTGGCCAAAGCAACGGTCGATGCACCCTCCAGACGATGAATGTTGCAGGTGGTCGTTTCGTTCACGCGCCGCCTGCTATCCCCGAGTCGGCGCTCGTTGCCTCGGCTGCTCAAAGCTCTTGA
Protein sequence
MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGRFVHAPPAIPESALVASAAQSS
Homology
BLAST of Spg037976 vs. NCBI nr
Match:
KAG6606390.1 (hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 136.3 bits (342), Expect = 1.4e-28
Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 0
Query: 1 MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 60
MFTILL P MEAARVM GEKWM+ K+D FVLP IQVLQRAPVPPSGRNPC+ IPGQ
Sbjct: 1 MFTILLPNP--MEAARVMSGEKWMKAKQD-IAFVLP-IQVLQRAPVPPSGRNPCSTIPGQ 60
Query: 61 SNGRCTLQTMNVAGG--RFVHAPPAIPESALVASAAQSS 98
SNGRCTLQTMNVAGG RFV APPAI + A +ASAAQSS
Sbjct: 61 SNGRCTLQTMNVAGGPARFVQAPPAIHDPAPIASAAQSS 95
BLAST of Spg037976 vs. NCBI nr
Match:
XP_022995941.1 (uncharacterized protein LOC111491306 [Cucurbita maxima])
HSP 1 Score: 136.0 bits (341), Expect = 1.8e-28
Identity = 76/99 (76.77%), Postives = 82/99 (82.83%), Query Frame = 0
Query: 1 MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 60
+FTILL P MEAARVM GEKWM+ K+D FVLP IQVLQRAPVPPSGRNPC+ IPGQ
Sbjct: 15 LFTILLPNP--MEAARVMSGEKWMKAKQD-MAFVLP-IQVLQRAPVPPSGRNPCSTIPGQ 74
Query: 61 SNGRCTLQTMNVAG--GRFVHAPPAIPESALVASAAQSS 98
SNGRCTLQTMNVAG GRFV APPAI + A +ASAAQSS
Sbjct: 75 SNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIASAAQSS 109
BLAST of Spg037976 vs. NCBI nr
Match:
XP_022931191.1 (uncharacterized protein LOC111437447 [Cucurbita moschata])
HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27
Identity = 75/99 (75.76%), Postives = 80/99 (80.81%), Query Frame = 0
Query: 1 MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 60
M TILL P MEAARVM G KWM+ K+D FVLP IQVLQRAPVPPSGRNPC+ IPGQ
Sbjct: 15 MLTILLPNP--MEAARVMSGHKWMKAKQD-IAFVLP-IQVLQRAPVPPSGRNPCSTIPGQ 74
Query: 61 SNGRCTLQTMNVAG--GRFVHAPPAIPESALVASAAQSS 98
SNGRCTLQTMNVAG GRFV APPAI + A +ASAAQSS
Sbjct: 75 SNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIASAAQSS 109
BLAST of Spg037976 vs. NCBI nr
Match:
TXG63783.1 (hypothetical protein EZV62_010777 [Acer yangbiense])
HSP 1 Score: 80.9 bits (198), Expect = 6.8e-12
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0
Query: 3 TILLAG--PQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 62
T+L+A + A R ++G++W +KEDNR Q LQ+ P+PPSGRNPC+NIPGQ
Sbjct: 20 TLLMASHDQHFVAATRPLEGDQW-TNKEDNR----LAFQSLQQGPLPPSGRNPCSNIPGQ 79
Query: 63 SNGRCTLQTMNVAGGRFVHAPPAIPESAL---VASAAQS 97
+G CTL N AGGR PPA P + VAS A+S
Sbjct: 80 GSGVCTLNGKNFAGGRVALEPPAFPSFVMDIGVASIARS 113
BLAST of Spg037976 vs. NCBI nr
Match:
XP_002319090.1 (uncharacterized protein LOC7487687 [Populus trichocarpa] >PNT06657.1 hypothetical protein POPTR_013G043600 [Populus trichocarpa])
HSP 1 Score: 77.8 bits (190), Expect = 5.7e-11
Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 3 TILLAG-PQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQS 62
TI+L Q + AAR ++GE+W E N IQ LQR PVPPSG +PCT+IPG+
Sbjct: 17 TIVLGSCSQQVLAARPLEGERWSEKIVGN-------IQSLQRGPVPPSGGSPCTHIPGRG 76
Query: 63 NGRCTLQTMNVAGGRFVHAPPAIPESALVASAAQSS 98
+G+C+L MN AG APPA P++ + AA S+
Sbjct: 77 SGKCSLGEMNFAGHTVALAPPAFPDAIMNFGAAAST 105
BLAST of Spg037976 vs. ExPASy TrEMBL
Match:
A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 76/99 (76.77%), Postives = 81/99 (81.82%), Query Frame = 0
Query: 2 FTILLAGPQLMEAARVMKGEKWM-EDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 61
F IL+A Q+M ARVMK EKWM E+K D+ FVLPIIQVLQRAPVPPSGRNPCT IPGQ
Sbjct: 12 FIILVASSQVMVGARVMKVEKWMKEEKNDHSVFVLPIIQVLQRAPVPPSGRNPCTGIPGQ 71
Query: 62 SNGRCTLQTMNVAGGRFVHA-PPAIPESAL-VASAAQSS 98
SNGRCTLQTMNVAG FVHA PP IP+SAL V S AQSS
Sbjct: 72 SNGRCTLQTMNVAGHHFVHARPPPIPDSALNVDSTAQSS 110
BLAST of Spg037976 vs. ExPASy TrEMBL
Match:
A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 8.6e-29
Identity = 76/99 (76.77%), Postives = 82/99 (82.83%), Query Frame = 0
Query: 1 MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 60
+FTILL P MEAARVM GEKWM+ K+D FVLP IQVLQRAPVPPSGRNPC+ IPGQ
Sbjct: 15 LFTILLPNP--MEAARVMSGEKWMKAKQD-MAFVLP-IQVLQRAPVPPSGRNPCSTIPGQ 74
Query: 61 SNGRCTLQTMNVAG--GRFVHAPPAIPESALVASAAQSS 98
SNGRCTLQTMNVAG GRFV APPAI + A +ASAAQSS
Sbjct: 75 SNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIASAAQSS 109
BLAST of Spg037976 vs. ExPASy TrEMBL
Match:
A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 75/99 (75.76%), Postives = 80/99 (80.81%), Query Frame = 0
Query: 1 MFTILLAGPQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 60
M TILL P MEAARVM G KWM+ K+D FVLP IQVLQRAPVPPSGRNPC+ IPGQ
Sbjct: 15 MLTILLPNP--MEAARVMSGHKWMKAKQD-IAFVLP-IQVLQRAPVPPSGRNPCSTIPGQ 74
Query: 61 SNGRCTLQTMNVAG--GRFVHAPPAIPESALVASAAQSS 98
SNGRCTLQTMNVAG GRFV APPAI + A +ASAAQSS
Sbjct: 75 SNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIASAAQSS 109
BLAST of Spg037976 vs. ExPASy TrEMBL
Match:
A0A5C7I2P2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010777 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.3e-12
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0
Query: 3 TILLAG--PQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQ 62
T+L+A + A R ++G++W +KEDNR Q LQ+ P+PPSGRNPC+NIPGQ
Sbjct: 20 TLLMASHDQHFVAATRPLEGDQW-TNKEDNR----LAFQSLQQGPLPPSGRNPCSNIPGQ 79
Query: 63 SNGRCTLQTMNVAGGRFVHAPPAIPESAL---VASAAQS 97
+G CTL N AGGR PPA P + VAS A+S
Sbjct: 80 GSGVCTLNGKNFAGGRVALEPPAFPSFVMDIGVASIARS 113
BLAST of Spg037976 vs. ExPASy TrEMBL
Match:
B9I5L3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 3 TILLAG-PQLMEAARVMKGEKWMEDKEDNRPFVLPIIQVLQRAPVPPSGRNPCTNIPGQS 62
TI+L Q + AAR ++GE+W E N IQ LQR PVPPSG +PCT+IPG+
Sbjct: 17 TIVLGSCSQQVLAARPLEGERWSEKIVGN-------IQSLQRGPVPPSGGSPCTHIPGRG 76
Query: 63 NGRCTLQTMNVAGGRFVHAPPAIPESALVASAAQSS 98
+G+C+L MN AG APPA P++ + AA S+
Sbjct: 77 SGKCSLGEMNFAGHTVALAPPAFPDAIMNFGAAAST 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6606390.1 | 1.4e-28 | 77.78 | hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022995941.1 | 1.8e-28 | 76.77 | uncharacterized protein LOC111491306 [Cucurbita maxima] | [more] |
XP_022931191.1 | 2.6e-27 | 75.76 | uncharacterized protein LOC111437447 [Cucurbita moschata] | [more] |
TXG63783.1 | 6.8e-12 | 47.47 | hypothetical protein EZV62_010777 [Acer yangbiense] | [more] |
XP_002319090.1 | 5.7e-11 | 45.83 | uncharacterized protein LOC7487687 [Populus trichocarpa] >PNT06657.1 hypothetica... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LCX8 | 1.0e-29 | 76.77 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1 | [more] |
A0A6J1K3A7 | 8.6e-29 | 76.77 | uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306... | [more] |
A0A6J1ET04 | 1.2e-27 | 75.76 | uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC1114374... | [more] |
A0A5C7I2P2 | 3.3e-12 | 47.47 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010777 PE=4 SV=1 | [more] |
B9I5L3 | 2.8e-11 | 45.83 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |