Spg029229 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029229
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	late embryogenesis abundant protein At1g64065
Location	scaffold12: 36206161 .. 36206775 (-)
RNA-Seq Expression	Spg029229
Synteny	Spg029229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTGGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTTAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

mRNA sequence

ATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTGGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTTAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

Coding sequence (CDS)

ATGGCGGCCGAAGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGAAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTGGCGGTAAGAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCCAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTTAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTCAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTCGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

Protein sequence

MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKGVSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEKKVSVLKCTMTLNLTSHGVQNLACL

Homology

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BLAST of Spg029229 vs. NCBI nr
Match: XP_022970100.1 (late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016995.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 7.9e-87
Identity = 172/203 (84.73%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATLRSRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Spg029229 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.4e-86
Identity = 171/203 (84.24%), Postives = 183/203 (90.15%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA +   DRPATLRSRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGQPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++   TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Spg029229 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86
Identity = 171/203 (84.24%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATLRSRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Spg029229 vs. NCBI nr
Match: XP_022145906.1 (late embryogenesis abundant protein At1g64065 [Momordica charantia])

HSP 1 Score: 302.0 bits (772), Expect = 3.9e-78
Identity = 154/203 (75.86%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA+ETSGDRPATLRSRRRASE+CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAV+NL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRVRLLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTMTLN +SH + NLAC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Spg029229 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 154/204 (75.49%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP   RSRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

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BLAST of Spg029229 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 69/203 (33.99%), Postives = 106/203 (52.22%), Query Frame = 0


Query: 4   EETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           EE SG      R  RR +E+      +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGP-----RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVRNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + R+L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+++L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVSV+ CTM LNLT   +QNL C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

[Close]

BLAST of Spg029229 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.8e-87
Identity = 172/203 (84.73%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATLRSRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Spg029229 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86
Identity = 171/203 (84.24%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA E   DRPATLRSRR+ASEKCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV V+NLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRVRLLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Spg029229 vs. ExPASy TrEMBL
Match: A0A6J1CXS7 (late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=LOC111015254 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.9e-78
Identity = 154/203 (75.86%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA+ETSGDRPATLRSRRRASE+CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAV+NL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRVRLLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTMTLN +SH + NLAC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Spg029229 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.6e-78
Identity = 154/204 (75.49%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP   RSRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Spg029229 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.6e-78
Identity = 154/204 (75.49%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MAAEETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           MAA++  GDRP   RSRR++S+KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVRNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAV+NLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Spg029229 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 81.6 bits (200), Expect = 7.8e-16
Identity = 69/203 (33.99%), Postives = 106/203 (52.22%), Query Frame = 0


Query: 4   EETSGDRPATLRSRRRASEKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           EE SG      R  RR +E+      +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGP-----RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVRNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + R+L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVRLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+++L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVSV+ CTM LNLT   +QNL C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

The following BLAST results are available for this feature:

BLAST of Spg029229 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970100.1	7.9e-87	84.73	late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 L...	[more]
XP_023550526.1	1.4e-86	84.24	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022929131.1	3.9e-86	84.24	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]
XP_022145906.1	3.9e-78	75.86	late embryogenesis abundant protein At1g64065 [Momordica charantia]	[more]
XP_008437351.1	1.1e-77	75.49	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]

BLAST of Spg029229 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.1e-14	33.99	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Spg029229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1W2	3.8e-87	84.73	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EM85	1.9e-86	84.24	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CXS7	1.9e-78	75.86	late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5A7TMT1	5.6e-78	75.49	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	5.6e-78	75.49	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Spg029229 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	7.8e-16	33.99	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 18..203
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 18..203
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 43..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029229.1	Spg029229.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane