Spg028739 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAAAATTACTAAACACAAAATTGAAAATTTAAAAATGTGTATATAAACTTAAACACTAAATTTAGTAACTTGTAATCTAATTAACTTGAGAAAGTAAAAAGCAAACCATATTATATGGATTAAAAAAAAATGTGGGGAAAATTTTTAAATCCCGTTCTTAGCTCGAAAGGGACAGTTTACGTACTTTTCTGCATTGTCAAAACATAATTTTAATTCAATTTTCAAATCTTGCCTTCTTTGTTTGACCCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAATCACTTTTTAACCCACCAAACAAAATCTTCCCTTATAATAAGACCCTTAGACTTCAATGATTCTCTCTTATACGCCCACCCACCACCTATCTTCTTCCCCTCTCTCTCTCCATTTTCCAAACTCTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGACTTAAGAAGACGGTGAAGGTGATGAAGATCTCCGGCGAGACGATGAAGCTCAACCCCCCGGTTCAAGCTGGGGACGTCGTCAAGGATTACCCTGGCTTTGTTCTGCTCGAATCTGAGGCCGTGAAGCACTATGGAGTTCGAGCAAAGCCATTGGAGCCCCACCAGAAGCTCAGCACGAAGAGGCTCTATTTCCTCGTCGAGCTGCCTAAGGTTCCAAATCAACAGGTGAGAAAATTCAAAAGCTTAAGTTGATAGGTTATGGAAAATTTAACGTCCTTTTCACTTGTACTGAAATGGAATATTAGTAAAAAATCCCAGGAGAGATTATTAATGATATTTATAACTAGATATTTTGTTTTGGTAAGTTAATAGGTTATAGTAAATTTAATATTTTATTCATATTCTTAACACACAGGCTCCACGACGGGTACGGTCGGCGATCAATATGAGTGCCAAGGATAGGCTAGAGAGCTTGATGTTGGCGCGAAGGTCGGCGTCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGAGGAGGAGGACGGAGGAGAGGGATCGAGAGCGGGAGCGACACGGTTGAAGGTGCGGCTGCCGAAGGCGGAGGTGGAGAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAAGATTGTGGGACTGTACATGAATAAAACCACACAAAGTGTTTCTGAAAATGCTCAAAAGGAAGAGAAGAAGGATATGATCAAGCCACGTGAGGTGCGTATATGCCCTTTCATTTTACTTGTTTTAGTCATAAAATTTCTAATTTCTAAGTCACTTTTATGTGATAAATCTTATTTCGTTCGTAAGTTTTTCGTGTTCGGTTCTTCTTTGGTGTCAATATGTGGGGTGGGAGGTACAATTTTATGCCAGTTGAACTATACTCTTGTTGACATTTTCTCCGTTTGTTTGTTTCTAGTTTTTAAAAAAGAAAAACAAAAACATAATAGGTAAGTGACACATATAATTTATTTTTAAAAAATATTTACCATATATTTTAGAAGTAAAAAAAATGATAAAACACTGTGAAAATAGGAAAAAAAAAAAAAAAAAAAACTAGACTGGTGTTGTTTCCAAAATTTTTGTATACTTTTGAAAATGAAACATGAAAAACATAGAATATTTACTTAGTAAACCTACAGATCTATTGTAGATAAATTTTTGAAGTCATATAGTAGATTGAAACTAGTTTTAAAATGGGTTTTAAATTTTTTTGTTAAATGGTTAATTAAAAATTGATACTTAGATAAAAAATTGAACAATACAGAAGTTGAAGAGAACTAAAATAAAATCTGATTTTTTTTTTGAGAATATAAACACTTTGGGTGGGGAATTCGAACTCCTGACCTCTTGGTCGAGGATACATGTCAATTACCACTAAGCTATGCTCATTTTGGCATAAAATCTGAACTTTTGAAACAATACACTTTTCTTTGAGTTATAATCTTTATTTACAAATTTAACAAATTAAAATGGTTTGTTTATTCATATGTTTCAGTTACAACAAAACTTTTTTAACTTCCCCATTTACTTTTAAAATACAATAATTAAAAATGGTTGGAAAAAAGACCAAAATATTACAAAGGTCAAAATAGATGGACAGTAAAAGACTCATGTGTGGGAATTCTATTAAGAAAAAATTAATAATTTGAATTATATTAAAGTATATTGATTCATGGAAATGTAATTAATATTCTCAATTGGGTTTTTGTTGATCAAGTAGTTGCACTTTTTTAAAAAGAAAGAGTTGGTGCAACTATAAATTAATTAATTTAATAGAGGACACAAAGTTGACTCACTCATCATCCAATGAGTCAATATTTTTGTTTGTTTAGTGCCCTTTTTTTATTTTTATTTTTATTTTTTGCCAAAATATATCAACATCTTATTATGGGTATCCATCTTACTTAGGATTTTTTTTTTCTTTCATGATATTACCTTATAAACATAGGGTAAGGATTTTAATGTACAAACTTATGAACTAAAAAATATAAAAAATAGAAAGATTTATGTTGGTCACCTTATAATATTGATATAAGCTTTTGTTTCAATTTTCATATAACAATTATTTTTCAAAATTAATAAAATGGTTTTCTTAGATAAAAAAAATGGTTAAAACCACTTTTGGTCTTCGTGGAAGTAACCATTTAATTAGTCCATGAACTCGATTTAGTCCTTATACTTTCAATTTTGTAACAAATTTAATCCTTGAACTTTCAAATGTAACAATTTGGTCCTGTACTTTAAAATTTGCAACAATTTATAGTTCCTATCGTGAAAATTAATGTTAAGATTTAATGAAATTTCTTACATAGAGAGATTAATAAACTAATTTGGGATCCAATATGTTTATACAAAGTCTAATCATTAAATAATAAAAAATCACTTCATAAATAATAAAAAATGACATTTAATTTTGATTATTTTTTTTTTGCAACAAGGATTAAATCGTTACAAATTTGACAGTACAAAGACTAAACTGTTACTTATCAAAGTTCAGTGACTAAATTGTCAAAAAAATAAAAGCACGTGGATTAAATCTTTACAAATCAAAGTTCAGAGACTAAATTGTTACTTTTACGAAAAGTGATTTTTAACGAAAAAAAAATCTATTCAACTAATGCTTAAAGATCTCTCGCTATATTAAAAGGTAAAATCGTTTGAGAATCATTTTTAGCATCCTTTATATAATTTAAAATTTTAAAACCTATCCTTGATGATAATGATATCATGATTTATGATATTTAACCTAATTAGAACACAAAGTTGACTCTCACTGTCCAATTAGTCAATTTTTGTTTGATTAGTGCTTTGTCTTCTAACCCATTAATCACAACTTTTTCTTAGTGTAGTAGACATCTTTGATTCCATCTCTTTTGTAGAATTTTCCACTCTAGAATTATTGATGTGCCAAATTTCATATAATTCTTATTTTTCAAAACCAATCAAATATTTTTCTTAAAGAAAATCATTAATCATTAATTTCTAATAACCTCTTACTATATTAAAAGATAGGATAGAATTATTTTTAAACCCATATTTCCATTATATTATTTTAAAATTTCAAATCTACCTTTAATAAATGATATGTTTTACTATTTAAACAGAGGTGACCAAGTAAACTCTTGCCATCCAATGAGTCCAATTTTGTTTGATTAGTGTTTTCCCTTTCATACCCATTAATTACAATCTTTTTCTTGGTGTAGTCATCTTTGTTTCCATCTCTTTTTCGTTGAATTTTCTATCCTCGAATTATTAATACAAATTTTTATTTCATATAATAATTTTTTTCGAAATATTTTTTATTGTACGAAAAAATGAGATAGTTTAACAAATAAGATCAAACCTTCAACTAAAAAAAAATCTAAAAGAATTCGAAAGAAATAATAGTTAGGTGTCTTATCCACTAAACTATGTTTAGATTGGCTGAAATATAGTTATAAAATTATTTTTAGTTGTATTTGTTCAAAATTTCAAATCTTCCCCCTAATCATGATATCTTTTGCTATATTAAAATAGAGGACACAAAATTGACTCCCACCAAATAGTTATTTCTTTTTTATTGGTCTGCCAAACCCATTATAATTTTACCATAGTGAGTGGCCAATTTAATTGCCAATACTTTTTGATAGAAGTTTCTTCCATTGTATAATTGATGCAACATTTTCTTTTGGGTAATTATTAAGATAGTTTTGATTCAAAACTATCATGAATGAAATTTGATATCCTTTATTAGTTTTTCTTTTTTGACCATCGTGGATGGAGATTTGAACCACAGACCTCTCAATCGTTAACATTTTTTTAGTGTTAATATAAATTTTAATTAAAAAATGGGTTGAAATTGCAGAAGCGACGTGTAAGCTTCATGACGACAATGGAAGCAGGGACACAAATTGCAGTGACATCTTAATTAAGGAAGAACAACAAGATTCATGAACAAATTAAATTGAAGTGATACAGTGACGGTCTAGTGAGAGCATTATGATACGTCCTTTACTTCAACTTAAAACATTTGAATCTTAAACCAGCTTTTGTAGAATATAGATAGATCATTTACTGTCCCCTTTGTGCACCCATTATGTAGTTATTAAAATTTAACTTCATCATACATCTGTAGCTAGCTTCCTAATGTTATGGGTAATATATATATGTTGGCTTAATATATGGTTTTAATGCTTAAGGTTAAAAACATTTTTCAAGTTGTGTATGGATACGCC ATGGGAAACACCTTTGGACTTAAGAAGACGGTGAAGGTGATGAAGATCTCCGGCGAGACGATGAAGCTCAACCCCCCGGTTCAAGCTGGGGACGTCGTCAAGGATTACCCTGGCTTTGTTCTGCTCGAATCTGAGGCCGTGAAGCACTATGGAGTTCGAGCAAAGCCATTGGAGCCCCACCAGAAGCTCAGCACGAAGAGGCTCTATTTCCTCGTCGAGCTGCCTAAGGTTCCAAATCAACAGGCTCCACGACGGGTACGGTCGGCGATCAATATGAGTGCCAAGGATAGGCTAGAGAGCTTGATGTTGGCGCGAAGGTCGGCGTCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGAGGAGGAGGACGGAGGAGAGGGATCGAGAGCGGGAGCGACACGGTTGAAGGTGCGGCTGCCGAAGGCGGAGGTGGAGAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAAGATTGTGGGACTGTACATGAATAAAACCACACAAAGTGTTTCTGAAAATGCTCAAAAGGAAGAGAAGAAGGATATGATCAAGCCACGTGAGAAGCGACGTGTAAGCTTCATGACGACAATGGAAGCAGGGACACAAATTGCAGTGACATCTTAA ATGGGAAACACCTTTGGACTTAAGAAGACGGTGAAGGTGATGAAGATCTCCGGCGAGACGATGAAGCTCAACCCCCCGGTTCAAGCTGGGGACGTCGTCAAGGATTACCCTGGCTTTGTTCTGCTCGAATCTGAGGCCGTGAAGCACTATGGAGTTCGAGCAAAGCCATTGGAGCCCCACCAGAAGCTCAGCACGAAGAGGCTCTATTTCCTCGTCGAGCTGCCTAAGGTTCCAAATCAACAGGCTCCACGACGGGTACGGTCGGCGATCAATATGAGTGCCAAGGATAGGCTAGAGAGCTTGATGTTGGCGCGAAGGTCGGCGTCGGACCTAACTATCATGAAACCGAAGAGCGTGTTGGAGGAGGAGGACGGAGGAGAGGGATCGAGAGCGGGAGCGACACGGTTGAAGGTGCGGCTGCCGAAGGCGGAGGTGGAGAGGCTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCGGAGAAGATTGTGGGACTGTACATGAATAAAACCACACAAAGTGTTTCTGAAAATGCTCAAAAGGAAGAGAAGAAGGATATGATCAAGCCACGTGAGAAGCGACGTGTAAGCTTCATGACGACAATGGAAGCAGGGACACAAATTGCAGTGACATCTTAA MGNTFGLKKTVKVMKISGETMKLNPPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEPHQKLSTKRLYFLVELPKVPNQQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVLEEEDGGEGSRAGATRLKVRLPKAEVERLLKESKDEAEAAEKIVGLYMNKTTQSVSENAQKEEKKDMIKPREKRRVSFMTTMEAGTQIAVTS Homology
BLAST of Spg028739 vs. NCBI nr
Match: XP_008454773.1 (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo]) HSP 1 Score: 334.3 bits (856), Expect = 7.4e-88 Identity = 185/214 (86.45%), Postives = 196/214 (91.59%), Query Frame = 0
BLAST of Spg028739 vs. NCBI nr
Match: XP_023511768.1 (uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 333.2 bits (853), Expect = 1.7e-87 Identity = 180/215 (83.72%), Postives = 195/215 (90.70%), Query Frame = 0
BLAST of Spg028739 vs. NCBI nr
Match: XP_022941735.1 (uncharacterized protein At1g66480-like [Cucurbita moschata] >KAG7030578.1 hypothetical protein SDJN02_04615, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 331.3 bits (848), Expect = 6.3e-87 Identity = 179/215 (83.26%), Postives = 195/215 (90.70%), Query Frame = 0
BLAST of Spg028739 vs. NCBI nr
Match: XP_008454771.1 (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo]) HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86 Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = 0
BLAST of Spg028739 vs. NCBI nr
Match: KAG6599897.1 (hypothetical protein SDJN03_05130, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 328.2 bits (840), Expect = 5.3e-86 Identity = 178/215 (82.79%), Postives = 194/215 (90.23%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.4e-36 Identity = 99/228 (43.42%), Postives = 148/228 (64.91%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy TrEMBL
Match: A0A1S3C0K8 (uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.6e-88 Identity = 185/214 (86.45%), Postives = 196/214 (91.59%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy TrEMBL
Match: A0A6J1FUK8 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111447013 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.0e-87 Identity = 179/215 (83.26%), Postives = 195/215 (90.70%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy TrEMBL
Match: A0A1S3BZC7 (uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 8.8e-87 Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy TrEMBL
Match: A0A6J1JGY1 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111484405 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83 Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 0
BLAST of Spg028739 vs. ExPASy TrEMBL
Match: A0A6J1FSC9 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81 Identity = 171/213 (80.28%), Postives = 189/213 (88.73%), Query Frame = 0
BLAST of Spg028739 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. ) HSP 1 Score: 184.9 bits (468), Expect = 6.8e-47 Identity = 117/224 (52.23%), Postives = 148/224 (66.07%), Query Frame = 0
BLAST of Spg028739 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 172.9 bits (437), Expect = 2.7e-43 Identity = 90/165 (54.55%), Postives = 123/165 (74.55%), Query Frame = 0
BLAST of Spg028739 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 ) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37 Identity = 99/228 (43.42%), Postives = 148/228 (64.91%), Query Frame = 0
BLAST of Spg028739 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 142.1 bits (357), Expect = 5.0e-34 Identity = 83/174 (47.70%), Postives = 114/174 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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