Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTTTTTGAAAGAAGAAAAAGAAAGGTGAAAAAGAAACAATCGACGAAATAGGGAGATGGATTAAACATCTCAAAAAGCGATCAATAAAATCAGCGCCATGTCTATGGAAGCTCAGCTGTTTGTGAACTCAGGAACTAGAATTGGAAGTGGGTGGCCTCTGAACCGCCATTTCCAGAGCAACCGGAAAGCCGCTCATTCCATTACTCTGTCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTTTCTGTTTCTCCGGCGGCGGTAGCGGAAGCGGACAAGAGCACGACGTCGGCGGCGGAAACTCCGGTGAGAATAGTGGCGATTGTTGGTGAAGGAAGCATCAGCCCATTGAAATCCACTCCCTGGGAAGAAGTTATGCTTCATACTGTGAGAACTCTTCATTTTCAATCTTCTTTCTTTATTGCACTCTCCACTGACGTTTTTTATATTCTCGATTAGAGCATTCTGTAAAAAAAATGATTAAATTAAGCTTTGTTTGGTTTTTGACTTTCTGGTTTTTGAAATTAAGCTTACTTTAAACGTTTTAGCAAAAAAAAACTAAAAAATAGTTTTTATAAATTTGTTCTTGTTTTGAAATTTGACTCTCAATTCAATTTTTTTTAGTTTAACCATTGCAAGGTAGCGTTCGAACCATCGACCTTTGAGATGGTAACGGATAAATTATGCTTAAATTAACTTAAAATGTGTTTTGGAATAACGTGAAGAAACAAACATAATTTCTACCAACAGAAAACTGAGAACAAAATTGTTATTAAACAAGGTCTTAGTGTCCCATTCACTTGTTGTATGTGGCTGACTCGCTTGATGCATGAAATCCAACCAAACCATCAACAAAATTCATTTTCTTTTGGATGGTGTTGATATGCCTTGAATATGTTATGAAGCGTTCCGAATGACCAAGTACGAGGGTCATATGTATTCTCCTCACGAATAAGATCGTTCTCTCCCTCTGCTCGTGGAGGTAGCTAACACACCGTTAGTGAACCACGTAAATTCTGTGTTGTTTCTTTGCACTTTCATTCTTATTCGTTGATTTATGATTTCTGTCATAATAGATGACATGTTCATGTGTTCAAAAAATTTCATCGTCCATAATCAATGGTAAAGAGTAAAGACAATTACAAAAGAATGTTACAAGTTACAAGAAAATACCCAGCAGAGGCATTAAAGTGAAATCACAGTCTAAATCTCCCCAAAAACTCTCAACACCGTTCAAGATTCTTCCATCCCTTTAGAGTCATATTAGCTGAATGAAAGCAAAAGAAACGTTCTCCTTTTTTGGAAGAGAGGTGTTAAGAAACACCTCCTCCATTATATCTGAGTTTAGGAGCCAAGCTAACCTTGAAGATTTCAAGGTTAGCTTGGCTCAAATAGGTCACAGCATGAGCATAGCTTAGCGATCAAAGCATTACTTCCTTCCCTACCCCATTCGTTGTACTTAAAACAAAAGAAAAAAAATTAAAGAGTTCTCCATAAGGTAGAATTGAGGGCTCAAAGCAAATGAAATCCAGTGTTGTTGATCCTCCACAAGGCTACCAACCAATGAGAAAAATCTTATTCTCAGGGACTTTAAGCTTTTAGAGTTTGACAAAGAAAGAAGGAGAGGAAGAAAAAGAGGGACAAGAAGGATTGACAATAAGGAAGATAATAGTTTAGTCAACTACACTAAAAGATTTTTGAAGATCGCTTCCTTTTCTTCACTAAGGCACCAAAACAGAAACATGATATGTCCTTCCTCTTTATCTATGTTGTGTTTTTGCTGTTCTTATCTCCATAAATGCTATAGGAGTTAATGTGCATTATTAATTCTTATGAGGATTAGCTTCATTTTTGTTCAGAAAAACGAAGAAGAATGACATTTTTTTTAATATCCGTGAGTGTTCGGGCTAACTTGTGCGCACCTCGACTAATCTCATGTGACAACCGCCTAATCCTACTACATTTCGTTGGCAGAAAACACATAGGATATTAAATCCTAGGTAGGTGGCCATCATGGATGGAACCCATTCTCTTTAAGCCCTTTATTTTTCCTGTGACTCTTATTGACCACTAGGCCAACCCATGATGGTTAAGAAGAAGACATCTAAGAAAGGATAAACCAGAAAGGAAAGATTCTCTTTATGTTGCACCTCATCAACTTTGCCATATCATAATGGCTTTTACCTGTTTTTATGATGCTCTTTATAAACAGGCAAAACGACTAAAATGGATCGATGAAGGCTACGAAATGCATGTCTTTGCTGATAGTTTCTGTAATGCAACTCATCAAGAAACCGAAAACATTCAAATTGTATGTGATGCGGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAATCGTATGGATACGAGCGAACTGCGAAAACATCCAAAATGTAATTTGCTTTGAATCTGCAACAGAGTTAGTTAACAAATTAGGGGGGCTATCCTTCCCCAGTGAAGCCAAAGGAAATGTACTGGAAAGCTTTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAAGTAGTGCAGACCGTATTTGAGGCATGGGATCGTCGTAATTCCGACGACATAAGGTTCTGTTTGTTGGTTATAATCAATGCCTATGTAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGTTTGTCAACTCTAAACTGCATGGTAAAGAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATGCTAATTGTAGGAAAGCTCTTCAATCCTTGAATCAATGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCATATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAAAAGAACAATTGTCTGGAGTTGGATGCGAAAGTTCCCAAAAGGCCTTACGTGCCTCCGATGGCAAAGTTTCGAGGGAAGGAGCTGTGCCACGAAACAGCAGAGGATCTTTTCGTTGGTTGGTTAGGGAGTTTGAAGTGGAGTTGGCGTGTGGTAGCTGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAACTGTTTTACAGGGGGAAAGCGAGAGGATCGTTTTGGTACGAGCCGGTTTTCATGGTGAAAACGTTGGAAGGGAAGATGGTGTGGAGACGGAGACGATATCGAGTAAAGAGGGGAAAAACTGCAGGGACATTCTTGTTCAGTGTGCTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGATGATCTTTCTTGGGGTTTGTTTCACTATAACGGCGCTGCTCGAGCTGCGGGACAGTCGTATACGGGCGCAGTTCTTGTGAGTCCAGATGGTGCATTCCCTGAGAATGATTATCAAAAAGAGAGAGTTGTTGCTGCTTTGGACAAATGTGGAATTAAAGGGTGGGAACTCTTTGCAGTTGATAACTGCTCATGTACAGATCCTCCTCTTGGAATTCCAGATGCTTCAACTTTGCATTCTGTAATTCAGCTTAAATAAAAATAACATGTTTATTCAGGGGTCTCTAAACTCTTCAAATATCCATTTTAGTCTTTGAACAATAACCATTTTTTTTTT
mRNA sequence
ATGTCTATGGAAGCTCAGCTGTTTGTGAACTCAGGAACTAGAATTGGAAGTGGGTGGCCTCTGAACCGCCATTTCCAGAGCAACCGGAAAGCCGCTCATTCCATTACTCTGTCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTTTCTGTTTCTCCGGCGGCGGTAGCGGAAGCGGACAAGAGCACGACGTCGGCGGCGGAAACTCCGGTGAGAATAGTGGCGATTGTTGGTGAAGGAAGCATCAGCCCATTGAAATCCACTCCCTGGGAAGAAGTTATGCTTCATACTGCAAAACGACTAAAATGGATCGATGAAGGCTACGAAATGCATGTCTTTGCTGATAGTTTCTGTAATGCAACTCATCAAGAAACCGAAAACATTCAAATTGTATGTGATGCGGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAATCGTATGGATACGAGCGAACTGCGAAAACATCCAAAATGTAATTTGCTTTGAATCTGCAACAGAGTTAGTTAACAAATTAGGGGGGCTATCCTTCCCCAGTGAAGCCAAAGGAAATGTACTGGAAAGCTTTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAAGTAGTGCAGACCGTATTTGAGGCATGGGATCGTCGTAATTCCGACGACATAAGGTTCTGTTTGTTGGTTATAATCAATGCCTATGTAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGTTTGTCAACTCTAAACTGCATGGTAAAGAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATGCTAATTGTAGGAAAGCTCTTCAATCCTTGAATCAATGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCATATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAAAAGAACAATTGTCTGGAGTTGGATGCGAAAGTTCCCAAAAGGCCTTACGTGCCTCCGATGGCAAAGTTTCGAGGGAAGGAGCTGTGCCACGAAACAGCAGAGGATCTTTTCGTTGGTTGGTTAGGGAGTTTGAAGTGGAGTTGGCGTGTGGTAGCTGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAACTGTTTTACAGGGGGAAAGCGAGAGGATCGTTTTGGTACGAGCCGGTTTTCATGGTGAAAACGTTGGAAGGGAAGATGGTGTGGAGACGGAGACGATATCGAGTAAAGAGGGGAAAAACTGCAGGGACATTCTTGTTCAGTGTGCTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGATGATCTTTCTTGGGGTTTGTTTCACTATAACGGCGCTGCTCGAGCTGCGGGACAGTCGTATACGGGCGCAGTTCTTGTGAGTCCAGATGGTGCATTCCCTGAGAATGATTATCAAAAAGAGAGAGTTGTTGCTGCTTTGGACAAATGTGGAATTAAAGGGTGGGAACTCTTTGCAGTTGATAACTGCTCATGTACAGATCCTCCTCTTGGAATTCCAGATGCTTCAACTTTGCATTCTGTAATTCAGCTTAAATAA
Coding sequence (CDS)
ATGTCTATGGAAGCTCAGCTGTTTGTGAACTCAGGAACTAGAATTGGAAGTGGGTGGCCTCTGAACCGCCATTTCCAGAGCAACCGGAAAGCCGCTCATTCCATTACTCTGTCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTTTCTGTTTCTCCGGCGGCGGTAGCGGAAGCGGACAAGAGCACGACGTCGGCGGCGGAAACTCCGGTGAGAATAGTGGCGATTGTTGGTGAAGGAAGCATCAGCCCATTGAAATCCACTCCCTGGGAAGAAGTTATGCTTCATACTGCAAAACGACTAAAATGGATCGATGAAGGCTACGAAATGCATGTCTTTGCTGATAGTTTCTGTAATGCAACTCATCAAGAAACCGAAAACATTCAAATTGTATGTGATGCGGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAATCGTATGGATACGAGCGAACTGCGAAAACATCCAAAATGTAATTTGCTTTGAATCTGCAACAGAGTTAGTTAACAAATTAGGGGGGCTATCCTTCCCCAGTGAAGCCAAAGGAAATGTACTGGAAAGCTTTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAAGTAGTGCAGACCGTATTTGAGGCATGGGATCGTCGTAATTCCGACGACATAAGGTTCTGTTTGTTGGTTATAATCAATGCCTATGTAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGTTTGTCAACTCTAAACTGCATGGTAAAGAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATGCTAATTGTAGGAAAGCTCTTCAATCCTTGAATCAATGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCATATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAAAAGAACAATTGTCTGGAGTTGGATGCGAAAGTTCCCAAAAGGCCTTACGTGCCTCCGATGGCAAAGTTTCGAGGGAAGGAGCTGTGCCACGAAACAGCAGAGGATCTTTTCGTTGGTTGGTTAGGGAGTTTGAAGTGGAGTTGGCGTGTGGTAGCTGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAACTGTTTTACAGGGGGAAAGCGAGAGGATCGTTTTGGTACGAGCCGGTTTTCATGGTGAAAACGTTGGAAGGGAAGATGGTGTGGAGACGGAGACGATATCGAGTAAAGAGGGGAAAAACTGCAGGGACATTCTTGTTCAGTGTGCTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGATGATCTTTCTTGGGGTTTGTTTCACTATAACGGCGCTGCTCGAGCTGCGGGACAGTCGTATACGGGCGCAGTTCTTGTGAGTCCAGATGGTGCATTCCCTGAGAATGATTATCAAAAAGAGAGAGTTGTTGCTGCTTTGGACAAATGTGGAATTAAAGGGTGGGAACTCTTTGCAGTTGATAACTGCTCATGTACAGATCCTCCTCTTGGAATTCCAGATGCTTCAACTTTGCATTCTGTAATTCAGCTTAAATAA
Protein sequence
MSMEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAEADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFCNATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLSFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPVPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPENDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK
Homology
BLAST of Spg027095 vs. NCBI nr
Match:
XP_023532406.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 983.0 bits (2540), Expect = 1.0e-282
Identity = 468/529 (88.47%), Postives = 504/529 (95.27%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAE 60
+SMEAQ FVNSGTR+G+GWPLNRHFQ NRKAAHS+TLSMPSRRR VSRRRL+V+ AAVAE
Sbjct: 9 VSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAE 68
Query: 61 ADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFC 120
A+KS T AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDE Y+MHVFAD FC
Sbjct: 69 ANKSATK-AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 128
Query: 121 NATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLS 180
+ATH +T+NIQIVC+ADILV+VAVTSKDS+VWI+ NC+N+QN+ICF+SATE VNKLGGLS
Sbjct: 129 DATHPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATEFVNKLGGLS 188
Query: 181 FPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPV 240
FPSE + NVL + FGNSQ+LEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPV
Sbjct: 189 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 248
Query: 241 PILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYE 300
PILKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LN+CSPVDQVCNYRCIASYE
Sbjct: 249 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNKCSPVDQVCNYRCIASYE 308
Query: 301 SPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWS 360
SPNLEAFSLCVLQKNNCLELDAKVP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WS
Sbjct: 309 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 368
Query: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTA 420
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TA
Sbjct: 369 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 428
Query: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPEN 480
GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+N
Sbjct: 429 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 488
Query: 481 DYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
D+QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIPD STLHSVIQ+K
Sbjct: 489 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQVK 536
BLAST of Spg027095 vs. NCBI nr
Match:
XP_022948244.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata])
HSP 1 Score: 980.7 bits (2534), Expect = 4.9e-282
Identity = 466/529 (88.09%), Postives = 505/529 (95.46%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAE 60
+SMEAQ FVNSGTR+G+GWPLNRHFQ NRKAAHS+TLSMPSRRR VSRRRL+V+ AAVAE
Sbjct: 9 VSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVAE 68
Query: 61 ADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFC 120
A+KS+T AETPVRIVAIVGEGSISPLKSTPWEEV+LHTAKRLKWIDE Y+MHVFAD FC
Sbjct: 69 ANKSSTK-AETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 128
Query: 121 NATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLS 180
+ TH +T+NIQIVC+ADILV+VAVTS DS+VWI+ NC+N+QN+ICF+SATELVNKLGGLS
Sbjct: 129 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 188
Query: 181 FPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPV 240
FPSE + NVL + FGNSQ+LE+RKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPV
Sbjct: 189 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 248
Query: 241 PILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYE 300
PILKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LNQCSPVDQVCNYRCIASYE
Sbjct: 249 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 308
Query: 301 SPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWS 360
SPNLEAFSLCVLQKNNCLELDAKVP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WS
Sbjct: 309 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 368
Query: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTA 420
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TA
Sbjct: 369 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 428
Query: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPEN 480
GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+N
Sbjct: 429 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 488
Query: 481 DYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
D+QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIPDASTLHSVIQ+K
Sbjct: 489 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536
BLAST of Spg027095 vs. NCBI nr
Match:
XP_023007352.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima])
HSP 1 Score: 976.5 bits (2523), Expect = 9.3e-281
Identity = 466/526 (88.59%), Postives = 499/526 (94.87%), Query Frame = 0
Query: 3 MEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAEAD 62
MEAQ FVNSGTR+G+GWPLNRHFQ N KAAHS+TLSMPSRRR VSRRRL+V+ AAVAEA+
Sbjct: 11 MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70
Query: 63 KSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFCNA 122
KS T AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDE Y+MHVFAD FC+
Sbjct: 71 KSATK-AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDV 130
Query: 123 THQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLSFP 182
TH +T+NIQIVC+ADILV+VAVTSKDS+VWI+ NC+N+QN+ICF+SATELVNKLGGLSFP
Sbjct: 131 THPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFP 190
Query: 183 SEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPVPI 242
SE + NVL + FGNSQ LEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPVPI
Sbjct: 191 SETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPI 250
Query: 243 LKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYESP 302
LKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LNQCSPVDQVCNYRCIASYESP
Sbjct: 251 LKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESP 310
Query: 303 NLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWSWR 362
NLEAFSLCVLQKNNCLELDAKVP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WSWR
Sbjct: 311 NLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWR 370
Query: 363 VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTAGT 422
VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TAGT
Sbjct: 371 VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGT 430
Query: 423 FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPENDY 482
FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+ND+
Sbjct: 431 FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDH 490
Query: 483 QKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQL 529
QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIPD STLHSVIQ+
Sbjct: 491 QKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535
BLAST of Spg027095 vs. NCBI nr
Match:
XP_038902076.1 (violaxanthin de-epoxidase, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 971.5 bits (2510), Expect = 3.0e-279
Identity = 470/531 (88.51%), Postives = 501/531 (94.35%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQ---SNRKAAHSITLSMPSRRRTVSRRRLSVSPAA 60
M+ME QL++NSGTRIG GW LNRHFQ S+RKAAHS TLSM SRR TVSRRRL+V P
Sbjct: 1 MAMEVQLYLNSGTRIGKGWLLNRHFQFFLSDRKAAHSATLSMSSRRPTVSRRRLTVPPPV 60
Query: 61 VAEADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFAD 120
VAEA+K TT AE PVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFAD
Sbjct: 61 VAEANK-TTVMAENPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFAD 120
Query: 121 SFCNATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLG 180
SFCN THQ+TE+IQI+ +ADIL+VVAVTSKDS++WI+++CENIQN+ICFESA ELVNKLG
Sbjct: 121 SFCNVTHQDTESIQIISEADILIVVAVTSKDSVLWIQSHCENIQNIICFESAAELVNKLG 180
Query: 181 GLSFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYV 240
GLSFPSE KGNVLE+FFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+
Sbjct: 181 GLSFPSETKGNVLENFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYI 240
Query: 241 KPVPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIA 300
KPVPILKNLRSKG STLNCMVKNCGRQILNCLMDANCRKALQ LNQCSPVDQVCNYRCIA
Sbjct: 241 KPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIA 300
Query: 301 SYESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSL 360
SYESPNLEAFSLCVLQK+NCL+LDAKVP +PYV P+ +FRGKELCHE AEDLFVGWLGSL
Sbjct: 301 SYESPNLEAFSLCVLQKHNCLDLDAKVPDKPYVQPIERFRGKELCHEMAEDLFVGWLGSL 360
Query: 361 KWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG 420
+WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG
Sbjct: 361 RWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG 420
Query: 421 KTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAF 480
KTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DGA+
Sbjct: 421 KTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGAY 480
Query: 481 PENDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQL 529
PEND++KERVVAAL+KCGIK WELFAVDN SC+DPPLGIPD STLHSVIQ+
Sbjct: 481 PENDHKKERVVAALEKCGIKEWELFAVDNSSCSDPPLGIPDGSTLHSVIQV 530
BLAST of Spg027095 vs. NCBI nr
Match:
KAG7035248.1 (Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 969.1 bits (2504), Expect = 1.5e-278
Identity = 464/529 (87.71%), Postives = 500/529 (94.52%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAE 60
+SMEAQ FVNSGTR+G+GWPLNRHFQ NRKAAHS+TLSMPSRR VSRRRL+V+ AVAE
Sbjct: 9 VSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRPAVSRRRLTVTAVAVAE 68
Query: 61 ADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFC 120
A+KS T AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDE Y+MHVFAD FC
Sbjct: 69 ANKSATK-AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 128
Query: 121 NATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLS 180
+ TH +T++IQIVCDADILV+VAVTS DS+VWI+ NC+N+QN+ICF+SATELVNKLGGLS
Sbjct: 129 D-THPDTKDIQIVCDADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 188
Query: 181 FPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPV 240
FPSE + NVL + FGNSQ+LEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPV
Sbjct: 189 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 248
Query: 241 PILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYE 300
PILKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LNQCSPVDQVCNYRCIASYE
Sbjct: 249 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 308
Query: 301 SPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWS 360
SPNLEAFSLCVLQKNNCLELDA+VP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WS
Sbjct: 309 SPNLEAFSLCVLQKNNCLELDAEVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 368
Query: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTA 420
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TA
Sbjct: 369 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 428
Query: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPEN 480
GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+N
Sbjct: 429 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 488
Query: 481 DYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
D+QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIP STLHSVIQ+K
Sbjct: 489 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPGGSTLHSVIQVK 535
BLAST of Spg027095 vs. ExPASy TrEMBL
Match:
A0A6J1G9B9 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451875 PE=4 SV=1)
HSP 1 Score: 980.7 bits (2534), Expect = 2.4e-282
Identity = 466/529 (88.09%), Postives = 505/529 (95.46%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAE 60
+SMEAQ FVNSGTR+G+GWPLNRHFQ NRKAAHS+TLSMPSRRR VSRRRL+V+ AAVAE
Sbjct: 9 VSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVAE 68
Query: 61 ADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFC 120
A+KS+T AETPVRIVAIVGEGSISPLKSTPWEEV+LHTAKRLKWIDE Y+MHVFAD FC
Sbjct: 69 ANKSSTK-AETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 128
Query: 121 NATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLS 180
+ TH +T+NIQIVC+ADILV+VAVTS DS+VWI+ NC+N+QN+ICF+SATELVNKLGGLS
Sbjct: 129 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 188
Query: 181 FPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPV 240
FPSE + NVL + FGNSQ+LE+RKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPV
Sbjct: 189 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 248
Query: 241 PILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYE 300
PILKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LNQCSPVDQVCNYRCIASYE
Sbjct: 249 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 308
Query: 301 SPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWS 360
SPNLEAFSLCVLQKNNCLELDAKVP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WS
Sbjct: 309 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 368
Query: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTA 420
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TA
Sbjct: 369 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 428
Query: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPEN 480
GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+N
Sbjct: 429 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 488
Query: 481 DYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
D+QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIPDASTLHSVIQ+K
Sbjct: 489 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536
BLAST of Spg027095 vs. ExPASy TrEMBL
Match:
A0A6J1KYG1 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499873 PE=4 SV=1)
HSP 1 Score: 976.5 bits (2523), Expect = 4.5e-281
Identity = 466/526 (88.59%), Postives = 499/526 (94.87%), Query Frame = 0
Query: 3 MEAQLFVNSGTRIGSGWPLNRHFQSNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVAEAD 62
MEAQ FVNSGTR+G+GWPLNRHFQ N KAAHS+TLSMPSRRR VSRRRL+V+ AAVAEA+
Sbjct: 11 MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70
Query: 63 KSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSFCNA 122
KS T AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDE Y+MHVFAD FC+
Sbjct: 71 KSATK-AETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDV 130
Query: 123 THQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGLSFP 182
TH +T+NIQIVC+ADILV+VAVTSKDS+VWI+ NC+N+QN+ICF+SATELVNKLGGLSFP
Sbjct: 131 THPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFP 190
Query: 183 SEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKPVPI 242
SE + NVL + FGNSQ LEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KPVPI
Sbjct: 191 SETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPI 250
Query: 243 LKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASYESP 302
LKNLRSKG STLNCMVKNCGRQILNCLMD NCRKALQ LNQCSPVDQVCNYRCIASYESP
Sbjct: 251 LKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESP 310
Query: 303 NLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKWSWR 362
NLEAFSLCVLQKNNCLELDAKVP++PYV PM KFRGK+LCHETAEDLFVGWLG+L+WSWR
Sbjct: 311 NLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWR 370
Query: 363 VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKTAGT 422
VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG+TAGT
Sbjct: 371 VVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGT 430
Query: 423 FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPENDY 482
FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG++P+ND+
Sbjct: 431 FLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDH 490
Query: 483 QKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQL 529
QKERVVAAL+KCGIK WELFAVDNCSC DPPLGIPD STLHSVIQ+
Sbjct: 491 QKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535
BLAST of Spg027095 vs. ExPASy TrEMBL
Match:
A0A1S3C790 (violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497481 PE=4 SV=1)
HSP 1 Score: 940.3 bits (2429), Expect = 3.6e-270
Identity = 449/530 (84.72%), Postives = 489/530 (92.26%), Query Frame = 0
Query: 3 MEAQLFVNSGTRIGSGWPLNRHFQ---SNRKAAHSITLSMPSRRRTVSRRRLSVSPAAVA 62
M+ +L++NSGT IG+GWPLN +F S+RK HS TLSMPS R TVSRR L+V P VA
Sbjct: 1 MKVELYLNSGTSIGNGWPLNPNFHFFLSHRKPTHSPTLSMPSHRPTVSRRLLTVPPPVVA 60
Query: 63 EADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFADSF 122
EA+K+ + +TPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKW+D GYEMHVFAD+
Sbjct: 61 EANKN-VAMTDTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDGGYEMHVFADNV 120
Query: 123 CNATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLGGL 182
CN T Q+T IQI+C+ADILVVVAVTS+DS++WIR NCENIQN+ICFESA ELVNKLGG+
Sbjct: 121 CNVTRQDTGTIQIICEADILVVVAVTSQDSVLWIRMNCENIQNIICFESAAELVNKLGGI 180
Query: 183 SFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYVKP 242
SFPSE KGN+LESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+KP
Sbjct: 181 SFPSETKGNLLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKP 240
Query: 243 VPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIASY 302
VPIL+NLRSKG STLNCMVKNCGRQILNCLMDANCRKALQ LNQCSPVDQVCNYRCIASY
Sbjct: 241 VPILQNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIASY 300
Query: 303 ESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSLKW 362
ESPNLEAFSLCVLQK+NCL+LDAK+P++PYVPP+ +FRGKELCHE AEDLF+GWLGSL+W
Sbjct: 301 ESPNLEAFSLCVLQKHNCLDLDAKIPEKPYVPPIERFRGKELCHEMAEDLFIGWLGSLEW 360
Query: 363 SWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKT 422
SWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGK
Sbjct: 361 SWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKI 420
Query: 423 AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAFPE 482
AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG +PE
Sbjct: 421 AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYPE 480
Query: 483 NDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
ND+QKER+VAAL+KCGIK WELFAVDN SC DPPLGIPD STLH VI++K
Sbjct: 481 NDHQKERIVAALEKCGIKDWELFAVDNSSCLDPPLGIPDGSTLHYVIEVK 529
BLAST of Spg027095 vs. ExPASy TrEMBL
Match:
A0A0A0LQ45 (VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV=1)
HSP 1 Score: 935.3 bits (2416), Expect = 1.2e-268
Identity = 448/532 (84.21%), Postives = 488/532 (91.73%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQ---SNRKAAHSITLSMPSRRRTVSRRRLSVSPAA 60
M +E NSGT IG+GWPLN HF S+RK + TLSMPS R TVSRR L+V P
Sbjct: 1 MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60
Query: 61 VAEADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFAD 120
VAEA+K+ + A+TPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKW+DE YEMHVFAD
Sbjct: 61 VAEANKN-MAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFAD 120
Query: 121 SFCNATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLG 180
+ CN T Q+TE IQI+C+ADILVVVAVT+KDS++WIR NCENIQN+ICFESA ELVNKLG
Sbjct: 121 NVCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLG 180
Query: 181 GLSFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYV 240
G+SF SE KGN+LE+FFGNSQL+EKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+
Sbjct: 181 GISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYI 240
Query: 241 KPVPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIA 300
KPVPILKNLRSKG STLNCMVKNCGRQILNCLMDANCRKALQ LNQCSPVDQVCNYRCIA
Sbjct: 241 KPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIA 300
Query: 301 SYESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSL 360
SYESPNLEAFSLCVLQK+NCL+LDAKVP++PYVPP+ +FRGKE+CHETAEDLF+GWLGSL
Sbjct: 301 SYESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSL 360
Query: 361 KWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG 420
+WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG
Sbjct: 361 EWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG 420
Query: 421 KTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAF 480
K AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG +
Sbjct: 421 KIAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKY 480
Query: 481 PENDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
PEND+QKER+VAAL+KCGIK WELFAVDN SC DPPLGIPD STLH+VI++K
Sbjct: 481 PENDHQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531
BLAST of Spg027095 vs. ExPASy TrEMBL
Match:
A0A6B7FH27 (Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 934.1 bits (2413), Expect = 2.6e-268
Identity = 448/532 (84.21%), Postives = 487/532 (91.54%), Query Frame = 0
Query: 1 MSMEAQLFVNSGTRIGSGWPLNRHFQ---SNRKAAHSITLSMPSRRRTVSRRRLSVSPAA 60
M +E NSGT IG+GWPLN HF S+RK + TLSMPS R TVSRR L+V P
Sbjct: 1 MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60
Query: 61 VAEADKSTTSAAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDEGYEMHVFAD 120
VAEA+K+ + A+TPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKW+DE YEMHVFAD
Sbjct: 61 VAEANKN-MAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFAD 120
Query: 121 SFCNATHQETENIQIVCDADILVVVAVTSKDSIVWIRANCENIQNVICFESATELVNKLG 180
+ CN T Q+TE IQI+C+ADILVVVAVT+KDS++WIR NCENIQN+ICFESA ELVNKLG
Sbjct: 121 NVCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLG 180
Query: 181 GLSFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYV 240
G+SF SE KGN+LE+FFGNSQL+EKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAY+
Sbjct: 181 GISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYI 240
Query: 241 KPVPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKALQSLNQCSPVDQVCNYRCIA 300
KPVPILKNLRSKG STLNCMVKNCGRQILNCLMDANCRKALQ LNQCSPVDQVCNYRCIA
Sbjct: 241 KPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIA 300
Query: 301 SYESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFRGKELCHETAEDLFVGWLGSL 360
SYESPNLEAFSLCVLQK+NCL+LDAKVP++PYVPP+ +FRGKE+CHETAEDLF+GWLGSL
Sbjct: 301 SYESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSL 360
Query: 361 KWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRG 420
+WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG
Sbjct: 361 EWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG 420
Query: 421 KTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAF 480
K AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG +
Sbjct: 421 KIAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKY 480
Query: 481 PENDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIPDASTLHSVIQLK 530
PEND QKER+VAAL+KCGIK WELFAVDN SC DPPLGIPD STLH+VI++K
Sbjct: 481 PENDLQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531
BLAST of Spg027095 vs. TAIR 10
Match:
AT2G21860.1 (violaxanthin de-epoxidase-related )
HSP 1 Score: 684.1 bits (1764), Expect = 8.9e-197
Identity = 331/491 (67.41%), Postives = 388/491 (79.02%), Query Frame = 0
Query: 40 PSRRRTVSRRRLSVSPAAVAEADKST-TSAAETPVRIVAIVGEGSISPLKSTPWEEVMLH 99
PS RR + V E +KST E PV+++A+VG+G +SPLKST WEEVMLH
Sbjct: 38 PSLDEASFSRRGRTTVVRVLETEKSTKIEKPEPPVKLIALVGKGEVSPLKSTSWEEVMLH 97
Query: 100 TAKRLKWIDEGYEMHVFADSFCNATHQETENI-QIVCDADILVVVAVTSKDSIVWIRANC 159
TA+RLKW+DEGYEM VF D ++ Q N+ Q + DILVVVAV + +S+ WI+ N
Sbjct: 98 TARRLKWVDEGYEMLVFDDEIVSSNDQRAMNLTQELNQTDILVVVAVNNSESVNWIQTNS 157
Query: 160 ENIQNVICFESATELVNKLGGLSFPSEAKGNVLESFFGNSQLLEKRKKSEEVVQTVFEAW 219
+N++N+ICFES+ L+N+LGG S + K K+ EVV+TV +AW
Sbjct: 158 KNVKNMICFESSPNLMNRLGGTDVGS----------------VNKDKEVTEVVKTVGDAW 217
Query: 220 DRRNSDDIRFCLLVIINAYVKPVPILKNLRSKGLSTLNCMVKNCGRQILNCLMDANCRKA 279
+RRNSDDIRFCLLVIINAY++PVP+L+NLRSKG STL+CMVKNCG QILNCL+D NCRKA
Sbjct: 218 ERRNSDDIRFCLLVIINAYIRPVPVLQNLRSKGFSTLSCMVKNCGPQILNCLLDPNCRKA 277
Query: 280 LQSLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPKRPYVPPMAKFR 339
LQ LNQCSPVDQVC+YRCIASYE P EAFSLCVLQK+NCLELDAK+P++PYVPPM FR
Sbjct: 278 LQCLNQCSPVDQVCSYRCIASYEGPYFEAFSLCVLQKHNCLELDAKIPEKPYVPPMTSFR 337
Query: 340 GKELCHETAEDLFVGWLGSLKWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFM 399
GKELCH+TAEDLFVGWLG L+WSWRVVAGQNPAYDQFPCQYQLFYRGK + SFWYEPVF
Sbjct: 338 GKELCHDTAEDLFVGWLGELEWSWRVVAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQ 397
Query: 400 VKTLEGKMVWRRRRYRVKRGKTAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGA 459
V+TLE K+VWRRRRY VKRGK TF FSVLDNGVVSNEFW+IVDV DDLSWGLFHY+GA
Sbjct: 398 VRTLEEKLVWRRRRYSVKRGKIPATFRFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGA 457
Query: 460 ARAAGQSYTGAVLVSPDGAFPENDYQKERVVAALDKCGIKGWELFAVDNCSCTDPPLGIP 519
AR AGQSYTGAVLV+PDG++P + KER+ +AL+KCGIK WELFAVDNCSC +PPLGIP
Sbjct: 458 ARVAGQSYTGAVLVTPDGSYPA-EKDKERLQSALEKCGIKEWELFAVDNCSCENPPLGIP 511
Query: 520 DASTLHSVIQL 529
S LHS I +
Sbjct: 518 QGSRLHSRISI 511
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023532406.1 | 1.0e-282 | 88.47 | violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
XP_022948244.1 | 4.9e-282 | 88.09 | violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata] | [more] |
XP_023007352.1 | 9.3e-281 | 88.59 | violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima] | [more] |
XP_038902076.1 | 3.0e-279 | 88.51 | violaxanthin de-epoxidase, chloroplastic isoform X1 [Benincasa hispida] | [more] |
KAG7035248.1 | 1.5e-278 | 87.71 | Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosp... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1G9B9 | 2.4e-282 | 88.09 | violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1KYG1 | 4.5e-281 | 88.59 | violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149... | [more] |
A0A1S3C790 | 3.6e-270 | 84.72 | violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A0A0LQ45 | 1.2e-268 | 84.21 | VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV... | [more] |
A0A6B7FH27 | 2.6e-268 | 84.21 | Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G21860.1 | 8.9e-197 | 67.41 | violaxanthin de-epoxidase-related | [more] |