Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTTAGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGGAAACTTTAAGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGGTTTGAGGGGAGGCCCTTGAATCAAGAATTATCAATGAAAGTGTGGTTTCTAGAATTTCCAATACATAATAAAGCGTCGAGTCAGAATCCAGAATCAACACTAGGTCGTCAAATTATTGAGGGTAAAGCTCGCTGGAGTTCGTCGTTTAAAATCCATGGAAAATTCGGTTACATTCACAATTATTGGGAATGTTTGGAAATTGTAGTTGCTCGCAATGAGCTGACACTTAAGAAGGCTCGTTTGTTTGATGCTGTGATGGCTTCCTTATACATCTATGATCGTAATACCGATATAATTCGAGCCTTTTTTGAGGCGTGGTGTCCTTCAACAAATACTCTTCATACGTCGTCTAGAGAGTTGTCTATCTCAGTCGCAGCTGCATGCTCTCCCACAGGGTAAGGGCAGCCTGATTATTGTGCTGACGATGTGATTTCCAACTATAGGAAATAGGCTGCCCTTACCCTGTGGGAGAGCATACACCAGAAGATCATACCCACTCCCTTCGACAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCATGCAATTTCTGAGACTCGTGCACCTGACTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAATAAGGTAGAGAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTTGGAGAGTAAGAATCGCCAATTGGAAGAGACTAAGTTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAGCAAAAGGTCACTTCAGCAACAACATCTACAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGTAGCTGTGAAAGCTAAAAGAGGTGAGATTTCTAAGTCAATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAACTCGAGGATTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTATTCTTACTAATGCTGATGCCAAAACTTTGACGATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
mRNA sequence
ATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTTAGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGGAAACTTTAAGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGCATACACCAGAAGATCATACCCACTCCCTTCGACAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCATGCAATTTCTGAGACTCGTGCACCTGACTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAATAAGCAACAACATCTACAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGTAGCTGTGAAAGCTAAAAGAGGTGAGATTTCTAAGTCAATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAACTCGAGGATTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTATTCTTACTAATGCTGATGCCAAAACTTTGACGATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
Coding sequence (CDS)
ATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTTAGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGTGCATGGAAACTTTAAGACATTGCAGCCTTCCTTAGATAGTTCTAGAGTCCTATCTAGATGCATACACCAGAAGATCATACCCACTCCCTTCGACAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCATGCAATTTCTGAGACTCGTGCACCTGACTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAATAAGCAACAACATCTACAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGTAGCTGTGAAAGCTAAAAGAGGTGAGATTTCTAAGTCAATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAACTCGAGGATTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTATTCTTACTAATGCTGATGCCAAAACTTTGACGATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA
Protein sequence
MVYFTEHPDPEKNCLVILKDRDQPVENGVILHVGEVVHGNFKTLQPSLDSSRVLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP
Homology
BLAST of Spg026876 vs. NCBI nr
Match:
KAA0048242.1 (hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa] >TYK08015.1 hypothetical protein E5676_scaffold265G001590 [Cucumis melo var. makuwa])
HSP 1 Score: 89.4 bits (220), Expect = 3.8e-14
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 0
Query: 54 LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR 113
L + I KI+ TPF+ I RL E L I + A L PL+E +++Y +++ Q
Sbjct: 169 LQKDIQDKIMQTPFEYIVRLRPEIETFLSEIEKIHADGLTPLEEYLNSYLKRERATQLSL 228
Query: 114 EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKT 173
E++ELE RL ++ A+ ++S EK D + Q +LE KL+ ++++E P +T K
Sbjct: 229 EKKELERRLYSINAEFEQLSILSCEKVDAIDQKELEVPKLQVEVNTLEITPTITEEAIKA 288
Query: 174 LTILRGMLEDAQEELKNYKW 194
L +R +E AQEE KN+KW
Sbjct: 289 LATVRRSMEVAQEEFKNFKW 308
BLAST of Spg026876 vs. NCBI nr
Match:
XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])
HSP 1 Score: 83.6 bits (205), Expect = 2.1e-12
Identity = 72/230 (31.30%), Postives = 107/230 (46.52%), Query Frame = 0
Query: 14 CLVILKDRDQPVENGVILHVGEVVHGNFKTLQPSL--DSSRVLSRCIHQKIIPTPFDKIP 73
C ++K Q VE + V E+ H +L L ++ L + QKII TPF+++
Sbjct: 771 CPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS 830
Query: 74 RLEQETVKILHAISETRAPDLDPLKEIVSAYF-----NKQQH----LQALRE-------- 133
LE E KI AI+ + + +L L+E+V+ YF + Q H LQ+ ++
Sbjct: 831 SLEPEMHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKG 890
Query: 134 -----------------------------EEELEARLVAVKAKRGEISKSIVEKEDLLKQ 193
E +LEA+L V+A+ ++S I + + LKQ
Sbjct: 891 FVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRAESAKLSGIIFKNDLELKQ 950
Query: 194 HQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWIP 196
Q E SK I +E API+ + DAK L+ LR LE EELKN+KW P
Sbjct: 951 KQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP 1000
BLAST of Spg026876 vs. NCBI nr
Match:
KAA0066958.1 (hypothetical protein E6C27_scaffold550G00980 [Cucumis melo var. makuwa] >TYK14222.1 hypothetical protein E5676_scaffold32590G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 79.7 bits (195), Expect = 3.0e-11
Identity = 44/135 (32.59%), Postives = 77/135 (57.04%), Query Frame = 0
Query: 58 IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEE 117
I KI+ TPF+ IPRL E +L I + A L L+E +++ +++ + E +E
Sbjct: 77 IQDKIMRTPFEYIPRLRPEIAMVLSGIEKIHADGLTSLEEYLNSCLKRERTAKLSLERKE 136
Query: 118 LEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTIL 177
LE RL ++ A+ ++S EK + + Q +LE +KL+ ++++E P +T + L +
Sbjct: 137 LEKRLRSINAESEQLSILSCEKAEAIDQQELEIAKLQDEVNTLESTPTITEEAIEALATV 196
Query: 178 RGMLEDAQEELKNYK 193
R +E A+EE KN+K
Sbjct: 197 RKSMEAAREEFKNFK 211
BLAST of Spg026876 vs. NCBI nr
Match:
KAA0025724.1 (uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 73.6 bits (179), Expect = 2.2e-09
Identity = 59/188 (31.38%), Postives = 86/188 (45.74%), Query Frame = 0
Query: 54 LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR 113
LS + QKII TPF+++ L+ E KI AI+ + + +L LKE+V YF ++ +R
Sbjct: 206 LSESLRQKIICTPFERVSSLKPEMRKIFAAIATSDSNNLTFLKELVDGYFQGVENHNQMR 265
Query: 114 ----------------------------------------------EEEELEARLVAVKA 173
+E +LEA+L V+
Sbjct: 266 SSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRT 325
Query: 174 KRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEE 196
+ ++S I + E LKQ Q E SK I ++ A I+ +ADAK L+ LR LE+ EE
Sbjct: 326 ESTKLSGMISKNEIELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEE 385
BLAST of Spg026876 vs. NCBI nr
Match:
TYK06155.1 (uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 73.2 bits (178), Expect = 2.8e-09
Identity = 59/188 (31.38%), Postives = 85/188 (45.21%), Query Frame = 0
Query: 54 LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR 113
LS + QKII TPF+++ L+ E KI AI+ + + +L LKE+V YF ++ +R
Sbjct: 241 LSESLRQKIIRTPFERVSSLKPEMRKIFAAIATSDSNNLTFLKELVDGYFQGVENHNQMR 300
Query: 114 ----------------------------------------------EEEELEARLVAVKA 173
+E +LEA+L V+
Sbjct: 301 SSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRT 360
Query: 174 KRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEE 196
+ ++S I + E LKQ Q E SK I ++ A I+ +ADAK L LR LE+ EE
Sbjct: 361 ESTKLSGMISKNEIELKQKQREISKTCEEIDKLKCALIIGDADAKMLLALRESLENTLEE 420
BLAST of Spg026876 vs. ExPASy TrEMBL
Match:
A0A5D3C961 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001590 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 0
Query: 54 LSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALR 113
L + I KI+ TPF+ I RL E L I + A L PL+E +++Y +++ Q
Sbjct: 169 LQKDIQDKIMQTPFEYIVRLRPEIETFLSEIEKIHADGLTPLEEYLNSYLKRERATQLSL 228
Query: 114 EEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKT 173
E++ELE RL ++ A+ ++S EK D + Q +LE KL+ ++++E P +T K
Sbjct: 229 EKKELERRLYSINAEFEQLSILSCEKVDAIDQKELEVPKLQVEVNTLEITPTITEEAIKA 288
Query: 174 LTILRGMLEDAQEELKNYKW 194
L +R +E AQEE KN+KW
Sbjct: 289 LATVRRSMEVAQEEFKNFKW 308
BLAST of Spg026876 vs. ExPASy TrEMBL
Match:
A0A5D3CS52 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32590G00010 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 1.5e-11
Identity = 44/135 (32.59%), Postives = 77/135 (57.04%), Query Frame = 0
Query: 58 IHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLKEIVSAYFNKQQHLQALREEEE 117
I KI+ TPF+ IPRL E +L I + A L L+E +++ +++ + E +E
Sbjct: 77 IQDKIMRTPFEYIPRLRPEIAMVLSGIEKIHADGLTSLEEYLNSCLKRERTAKLSLERKE 136
Query: 118 LEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRGTISSIEDAPILTNADAKTLTIL 177
LE RL ++ A+ ++S EK + + Q +LE +KL+ ++++E P +T + L +
Sbjct: 137 LEKRLRSINAESEQLSILSCEKAEAIDQQELEIAKLQDEVNTLESTPTITEEAIEALATV 196
Query: 178 RGMLEDAQEELKNYK 193
R +E A+EE KN+K
Sbjct: 197 RKSMEAAREEFKNFK 211
BLAST of Spg026876 vs. ExPASy TrEMBL
Match:
A0A2N9J4K8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59437 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 3.6e-10
Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 0
Query: 53 VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFN--- 112
+L + +KII TPFD + L++E KI+HAI +T R D L + + N
Sbjct: 1504 MLGEGLIEKIIKTPFDSVASLKEEVRKIIHAIRQTTIVDSRIRDAQMLNVAILLHSNQKL 1563
Query: 113 ---------KQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRG 172
K + + L +E EL L + +RG++ SI E+ L Q Q S+++
Sbjct: 1564 LRLGIVVELKAELSKVLSKETELRKELELLATQRGKLENSISLHEEKLPQLQAAVSRIKE 1623
Query: 173 TISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI 195
IS IE P L +D L LR +LE ++EELKN WI
Sbjct: 1624 EISEIEATPTLETSDHAKLQELRELLETSREELKNLDWI 1662
BLAST of Spg026876 vs. ExPASy TrEMBL
Match:
A0A2N9GDD1 (Protein DETOXIFICATION OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25387 PE=3 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 6.2e-10
Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 0
Query: 53 VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISETRAPDLDPLK---------------- 112
+L + +KII TPFD + L++E KI+HAI +T D+ PL+
Sbjct: 1236 MLGEGLIEKIIKTPFDSVASLKEEVKKIIHAIRQTAIVDVMPLQDRNQRRADAERCHTLA 1295
Query: 113 ---EIVSAYFN---KQQHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLED 172
E + A ++ + + + L E EL L + +RG++ SI +E+ L Q Q+
Sbjct: 1296 LKLEAIEARYSSIAEAELSKVLSRETELRKELELLVTQRGKLENSISLQEEKLPQLQVAI 1355
Query: 173 SKLRGTISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYK 193
S+++ IS IE P +D L LR +LE +QEELKN++
Sbjct: 1356 SRIKEEISEIEVTPTFETSDLDKLQELRELLETSQEELKNFR 1397
BLAST of Spg026876 vs. ExPASy TrEMBL
Match:
A0A2N9GHR5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29928 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 6.2e-10
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 0
Query: 53 VLSRCIHQKIIPTPFDKIPRLEQETVKILHAISET-----RAPDLDPLKEIVSAYFNKQ- 112
+L + +KII TPFD + L++E KI+HAI +T R D L + + N++
Sbjct: 614 MLGEGLIEKIIKTPFDSVASLKEEVRKIIHAIRQTTIVDSRIRDAQMLNVAILLHSNQKL 673
Query: 113 -----------QHLQALREEEELEARLVAVKAKRGEISKSIVEKEDLLKQHQLEDSKLRG 172
+ + L +E EL L + +RG++ SI E+ L Q Q S+++
Sbjct: 674 LRLGIVGRAEAELSKVLSKETELRKELELLATQRGKLENSISLHEEKLPQLQAAVSRIKE 733
Query: 173 TISSIEDAPILTNADAKTLTILRGMLEDAQEELKNYKWI 195
IS IE P L +D L LR +LE ++EELKN WI
Sbjct: 734 EISEIEATPTLETSDHAKLQELRELLETSREELKNLDWI 772
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048242.1 | 3.8e-14 | 36.43 | hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa] >TYK0801... | [more] |
XP_031745312.1 | 2.1e-12 | 31.30 | uncharacterized protein LOC116405439 [Cucumis sativus] | [more] |
KAA0066958.1 | 3.0e-11 | 32.59 | hypothetical protein E6C27_scaffold550G00980 [Cucumis melo var. makuwa] >TYK1422... | [more] |
KAA0025724.1 | 2.2e-09 | 31.38 | uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa] | [more] |
TYK06155.1 | 2.8e-09 | 31.38 | uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C961 | 1.9e-14 | 36.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CS52 | 1.5e-11 | 32.59 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A2N9J4K8 | 3.6e-10 | 33.96 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59437 PE=4 SV=1 | [more] |
A0A2N9GDD1 | 6.2e-10 | 32.10 | Protein DETOXIFICATION OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25387 PE=3 SV=1 | [more] |
A0A2N9GHR5 | 6.2e-10 | 33.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29928 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |