Spg023619 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023619
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 3986862 .. 3992103 (+)
RNA-Seq ExpressionSpg023619
SyntenySpg023619
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCGGCAGCAGGGCAGCGGCGGTTCGAGCTTCGGGTTTGCAGCAGCTTCCTTCTGCGGCGGCACGTGTTCTCCGGCACTCTCTCAGCGGTGTAGCGTTGAACCAGTAGCGGCGCACAACGACAACTCAGGGGTGGCGTGCGGGCAGCCTTCGCAAGCGTGGGTGGGTGTTTTCCGGCGAGCAACATTCCGATCTACGCGAACAACAGCGATTTTGGGCATTTTGAGCGTTTTTCCAGCTTGTTAAATCTTGGGTAAGTGAGATTGAAGTATTTTTGGTTTTGTTGTGAGCGTTTGATGAATACCCACTGAATTGGATTCGAAACTAAAGGTACCCGCATCGATCGGAATGTGAATCGCCAAAGTTGGAGCAATTTAAGAACCCGTTCATCAAGTTTTTGGCACATTTCTCTTCTTTCTTTTAGCGATTTTGGCCTTGGGGCCCCTCAAGTAAATGGAGCTCGAAACTATCTAAATTGGATTGAATTTAGAACCAACCAACAAGCCGTAGTAATCGATTAATTGATTAAGGTCGAGGTTGGCCTTTGCTGGAATTGTTGGGAATTGAAACCAAGATTTTAATAAGCCAAGGTAAGTGAACTTACTATTGAACTTTTTAGTTGGGTGCGCGTGTCTGATTTTTCTAAAATTCTCGTGCTTATGTGTTATCCTTGAAATTTATTTTATTTAATAAAAGCATGAGAATTTTATGAAAGTTTATTATCTTTTATTTGAGTATGCGTTTATGAAAAAATTATTGAAAGCATGAAATTCATTATCATCGCTTGCATTTGTTAACGTGTAAAATAGTTGAGCTGGTGGTCTCTTTTAAATTCCGTTAAAGGAATAAGTTTAAATTAGTGTACATGAAATTGATGTACGTTCGGAGATGCCTACACAGGGCTTAGGGACATGATATTGATGTACCTAAGTCGAGGTTTGTGAAATTGACGACCTCAAGGTTTCGTGAAATTGACAGCCTCCGTAGGAGACATATGAAATTGATGTGTCTAGAATATGCATGAAAGTGATGCATATTCTCTCTCATTAGAAATACACATGAAATTGATGTGTCTAGGATATGCATGAAATTGATGTATATCCTGAGTTTAAAATAAAGTTAGACCCACCAGCTTCCGCCTTGATTCGTCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATCTGTAACGCCCCAGGTCGCAGGGGAATGTCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGACCTGAGGCGTTACAAACAAGGTATCCGTTACTATTTTCATAGGTTGATGAATTAAAAAAAGAAAAAAAAATCTCTAATAAATTATTATTTTTGGAAGTAAACGACTTCTCGAGCATGAAGAAAATAAAATATAAGTGACAATTGAGGCAGATTTAAAATTTAGTGATAGAATATTAATTGTGTTGAAGATCAAAGCCACGATCGAATTACAGATACCCCCATTGTTTAGAAATAAATAATTAATTATTAAAAAATAAATAATTAATTAATTTTTAAAAAAGGACAAGTCTTTAGGTACATGCAATGGAAGAAAATAATGGGCATTATTAATATAAATAATTTTAGATCTCAAAATAAGAAAAAAAGAAGCTGAAAAGAAACAGGGCCTTTGAATCCATCCATAAATCACAGCAATAATTTTTAATTTTTTCCCACTATCTTTTTCTTCATTTTGTCGCCTTATAGTTGTGAGAATCTGATTTTTCCAAAGACCAACCATACTTTTTCTTCTAAAAGAAAAAAAAAAAAAAAAGTCATTGCCATATTGTTCCCACTAATAATCTTCAAGCATACAAAATTTTAACATTCCATTATTTTTAAACCTTAAATACTATATATTCAATAATTTAATATAGACTTAATTATCAATTTAACTTTGGTTTCCACTTGATTTAAAATTGTCTCTATGATTTTAGAAGTTTTAGTTTAGTTTTGATGGATTAAGGGTGTGTTTGGTTTAACTTTTCATGTATTTAATTTTGAAAAAAAAAAATATAGTGTTTAGAAACTACTAAAACTGACTTATTTAAAAAATGAGATTGTGAAATAAACCATTTTGAGAGAAACATTTGATTTTTTTTTTTTTTTAAAAGAGTTTTTAAGAGATCTCAAAAAGAAAAAAAAAAGAGTTTTTAAGTATATAATAATTTGGGTATAAAATCACTTATGAGGAAATGTAACCAAACATACGAGTGTTTAAATTCTAAACAAGTTTTATACAAAATGTTTAAAAAGAAATGCATTATTGAAAAACACTTAAACTAAAAAGTATTCCAAACAAACTTTAAGTTGAATTTAATTCTAGAATTATACAATTTGGTTTATTGTCATAAGATTTTCCTACAACAATTTTTTATCCACTCAAGAATTCTAGCTTTTTTTAGTCCAAAATCCTAACACAATCAACTAATACAGCTACCAAAATAGAAAAAAACCAAACTCATTCGATATTAGAAAGCTACTACATATCTGATGAGACTATGACTTTTACAATTTGTACAATTTTTTAAGTGGATAAAAACACTCATTATCTTTTTAAATTTACATATGTTTTTTTTTTTTTTTTGAGAACTTAAATTTACATATGTTTGATCCTTTGTTCTCATATTTGTTGAACTAAAATAAGGTTGAACAAAACTCTAAACAACTCTAAACATCAAATTAAAACTTTAATGAACTCAAAAAAATTAAATGCAACTAAACCAAAATTATAAATGCAATTATTAATTTAACATTTAAATTATATACATTTATTAAAAAAAAAACAATATAAATGCCAACAAAAAATTTGAAAGAGATAACTAATTATGCCGACTAGTAAATATTGGACAGCCGTCAATAATTACAAGGAAACAGTTGTGAAATTACAGAAGGGCAGTATTGTAAAATAGAGGAAAAAAAAATTAAAATACAAGGACAAAATCCCGTAAAAGCCACGTAGGCACTCTCTCACGTAGAAAAGCAACGAACTCGCTCGATCAGACTGCCACGTGGCGGACCTTTTGCCAATTAAACGAATATGATTGGCTGGAGTACGTGGAGGCAATGGGTGGTCAACACAGTCAACTTCGAGAGCGAGTACCGGTGAATTCCACAGTCGCGCGAGTGAAACTTGTTAGAGTAGAGATAAATTCCACAGTCGCGCTGAGTTTATATTTAAGAGAGGAGCGTGAGAGAGAGAAGAAGAAGAAACGAAAGGAGAAAGAAGTTTTCAGACACAGAGAGAAAAGAAAGGGGAAATTTTTTTTTCTGCTCTTCTTTTTTTCTCTTGAAGTTTCTGTTCTTCTTTGTTCTCCTCTTGTCTCGGTTCTGAAATCTCGGTCGGAATCGGAATCTGTGTTGTTGTTTTCTTACGGAAATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAGTAAGCAACTCAGATCTACTTTAATTTGTTGCCCTTTTGATTAATCTGGACTTTGTTAACTGGAAATTTGAAATTTCAGATGTAGGGTTAGTTTCTGAATGTCTGTTTAGAAAACCCTCATTTGGGGTTTTAGTTGAGTTTTGAAATCGTGGGAGTTACTGTTGTTTTGATTCATTAGCCCTGTTTCTTTGCGTTATGAGTTCAGATCTGTGAGTGGAAATGACTTGGGACTTTCTGTTTTTGTTTACTAGTGAGCAATGTGTTTAGTTCTTGGTCATTTTTGGATTCTTACTGAAATGGGTTTGCATTGAAATGGAAAATTTGGCCCTCCTTTTTGTTTCTCTCTGGGATTTTAAGCTGTGATGAGATAATCTCTTTGTGGGTATTGAATGTTTCTGAAAGGCAGGGGATCTTTAAAATTGTTTCGGTTTATTTGTTCTAGCAAAACCCTTTTGGATCTTGATGATTTCATTTTTGTTCTTTAGGTTCAACGAGTTTGGTACTGATGGAGGACCGGCGGCCAAGTATCTGAAACCAAAATTCAATGTGTTCTCTCGCAACTTTGAATCTCATACTGGGTTGGATTTCCCAAAAGTTGAGGTTAGAAAATGGTCTCATCAGTTTCTCATTCTTTCTCATGGCTATTGTTCTTTGAATTTTCATCCATTTTAAGTGGCATTCTGAGAGTTGTTGTTGGGTACAGATCTTACACCTTGTGGCTGGTGCCATTGCGTTGAAGGGCCTTGGAAGCCTGCTCTTCATCTTCAACAGCTCCATTGGAGCCTTTCTTCTGGTATGTTATGATGTCAAGTTTTTGAAACCAATGTTCATTGTCTTGGCGAAATCAACTGGATTGAATTGTTGAATGTTGCTTTTCTTTCTGTGCAGATCTTGCATCAGGCCATCACTGCACCCATATTGTACGATTTCTACAACTACGATGTGGAGAAGAAGGAATTCAACCAACTCTTTGTGAAATTCACTCAGGTAATGAAGAATCTGATTGTTTCTCTCATTTTCAGCTCGAAGTAATCTGAGAATTAAAGACACTTTTGGTTAGTGATCTAAAAACAGATATTTAAAATCATAGTTGTATCATATGTTTCCATTCCCAATTTAGAATCTAGAATTCAAACACAAGCCAGGTACAGAAACTCACTTAACTTGTGTAACTCAACGAATCTAAAAATAAGAAATTGAATGTGGATAAGATATCGAAGAACCGAAGAGACGAAGAGACGGTAACCTTTCGCGTGTGACATTGTGCAGAACCTGGCATTGTTGGGAGCGTTGCTGTTCTTCATCGGCATGAAGAATTCGATTCCGAGGAGACAAGTAGCGAAGAAGAACCTGAAATCGAAAACATCATAGATTATCAAGGGAGGAATTAGGGGGGCGTATGTTTTTCTTTTCTGTAGGACTCTTTTTTGGAAATGAACACTCATATGATCTTCATCTCTTTAAATTTGAATCATTTTGAGGGGCCGTACGTGTTGTTGTTTTAGTTTTTTTTTTTGAGGTTGTGATATGTTTTTGTTTAGTCTTCTATGGACTTGAGGATATTTTTGTAATTTCAAGTTTGGGGTTATGTGATTGTAATGAAAGTTCTTTCACATAATTTTGAAGTTTCTGTGTGTTTGAAAAGGGAAGACATTTCTTCAAAGCGAAGAAGATGGTGGGAAACAGAGGTTGGTGGATGGAAAAGGGAGATATTAAAAGTGAAGTTATGTATAAATGTATACTTTGTCAAAGATAATGGCTTCCTTTTTTAA

mRNA sequence

ATGTCGCGGCAGCAGGGCAGCGGCGGTTCGAGCTTCGGGTTTGCAGCAGCTTCCTTCTGCGGCGGCACGTGTTCTCCGGCACTCTCTCAGCGGTGTAGCGTTGAACCAGTAGCGGCGCACAACGACAACTCAGGGGTGGCGTGCGGGCAGCCTTCGCAAGCGTGGGATATGCATGAAATTGATGTATATCCTGAGTTTAAAATAAAGTTAGACCCACCAGCTTCCGCCTTGATTCGTCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATCTGTAACGCCCCAGGTCGCAGGGGAATGTCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGACCTGAGGCGTTACAAACAAGTTTCTGTTCTTCTTTGTTCTCCTCTTGTCTCGGTTCTGAAATCTCGGTCGGAATCGGAATCTGTGTTGTTGTTTTCTTACGGAAATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCATGTAGGCCCTGTTTCTTTGCGTTATGAGTTCAGATCTGTGAGTGGAAATGACTTGGGACTTTCTGTTTTTGTTTACTAG

Coding sequence (CDS)

ATGTCGCGGCAGCAGGGCAGCGGCGGTTCGAGCTTCGGGTTTGCAGCAGCTTCCTTCTGCGGCGGCACGTGTTCTCCGGCACTCTCTCAGCGGTGTAGCGTTGAACCAGTAGCGGCGCACAACGACAACTCAGGGGTGGCGTGCGGGCAGCCTTCGCAAGCGTGGGATATGCATGAAATTGATGTATATCCTGAGTTTAAAATAAAGTTAGACCCACCAGCTTCCGCCTTGATTCGTCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATCTGTAACGCCCCAGGTCGCAGGGGAATGTCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGACCTGAGGCGTTACAAACAAGTTTCTGTTCTTCTTTGTTCTCCTCTTGTCTCGGTTCTGAAATCTCGGTCGGAATCGGAATCTGTGTTGTTGTTTTCTTACGGAAATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCATGTAGGCCCTGTTTCTTTGCGTTATGAGTTCAGATCTGTGAGTGGAAATGACTTGGGACTTTCTGTTTTTGTTTACTAG

Protein sequence

MSRQQGSGGSSFGFAAASFCGGTCSPALSQRCSVEPVAAHNDNSGVACGQPSQAWDMHEIDVYPEFKIKLDPPASALIRPRTTSYWERFRSDTICNAPGRRGMSGPLRAESGFRILDLRRYKQVSVLLCSPLVSVLKSRSESESVLLFSYGNGFRFVCRKSSLRLGLHVGPVSLRYEFRSVSGNDLGLSVFVY
Homology
[Close]
BLAST of Spg023619 vs. NCBI nr
Match: KOM53026.1 (hypothetical protein LR48_Vigan09g168500 [Vigna angularis])

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 72  PPASALIRPRTTSYWERFRSDTICNAP 99
           PPASAL+RPRTT YWER  SDTICNAP
Sbjct: 79  PPASALVRPRTTPYWERLGSDTICNAP 105

[Close]
BLAST of Spg023619 vs. ExPASy TrEMBL
Match: A0A0L9VD91 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g168500 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.3e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 72  PPASALIRPRTTSYWERFRSDTICNAP 99
           PPASAL+RPRTT YWER  SDTICNAP
Sbjct: 79  PPASALVRPRTTPYWERLGSDTICNAP 105

The following BLAST results are available for this feature:
BLAST of Spg023619 vs. NCBI nr
Match NameE-valueIdentityDescription
KOM53026.14.7e-0485.19hypothetical protein LR48_Vigan09g168500 [Vigna angularis][more]
BLAST of Spg023619 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg023619 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0L9VD912.3e-0485.19Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g168500 PE... [more]
BLAST of Spg023619 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023619.1Spg023619.1mRNA