Spg023040 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023040
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L13
Locationscaffold12: 30647400 .. 30649416 (+)
RNA-Seq ExpressionSpg023040
SyntenySpg023040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAGGAACGAGGAGACTGGAATTGCAGAAGGGGGCGCAGAGAGGAAAAAGGTTCTCTTCAATTTCAATTCAGTGTGTTGCTTTCCTCTGCTGAATTTAATTTGATCTTCGTTTTTCGAAATCTATACATCGTTAAATTAGGGTTCTTAGTTCCTTCTCAACCAGTCCTGCTCAAGCTGTTTAGAGGGATCGTTCGGTTTTATTTTTTTTTGCCTCTCTGCATTTTCTTGGTATCCTACAAATGGTTGCGATGTCGGTTCCGCTTGTGGTTTTTCTTCTAGGGATTTGGCTTTCTTTTTCCAATCTTCACTTAGGGTTTTATTTGCTATTGTTGTTGGCAGTTTTGTGTTCGAATTAACCTTGTCTTCTTTGGAAAAGAAAATGTTGGTGTATTTGTTTGCTAGTGTGTCAACGAGATTTATCTGGATCGACCAATTTCATGATATGTAGAACATGAACAAAGTTCCTTTCTTAGGTTGTAATTTGCTAACTCAAATGCTTTAGCAGGTAAGCCATGAAGCACAACAATGTTATTCCTAGTGGGCACTTTAGGAAGCACTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCCAGGAAAACAAGGAGAAGGAATGGTGAGTGCCAGTTCTCAATTTCTGTTTCTGGGTTTTCTCTTCTGCCATTTCATCGTTGGTTATATGTTGTTTTGTATTGTTCTAACTGTTTTTTCTTGTGGATCATCACCAGCTCGTCAAGAAAAGGCTGTGAAAAATTTCCCTCGCCCTACTGCTGGACCACTTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAGTTGAAGGTGGGATTATTTTTTGGCTTTTGAGTTTTTTGGATGATATATGCATATATAACTCAGTTGATTCTGTGTTTCGTGTTTTCATTTCGATAAATGAAATATTGGAACTGCATCGTCATTTTTTTTTCAAATGTGAATGAACAGAAGCTTTATTTATATAAACCTTCGTTTTTTTATATGAGGTGTGCTCTGGTTCTGTACTTGGTAAAATTGTTTCTTTGGAAGTCCTGCGAGCATGACATGGAGTTGTAAAGTTAAACATCTGAAATATCTGCACAGTTGTGAATGCTGATTAACGCATAGTTCTTCTAGAGTGCACTAGAGTTGAGTAGTGAATTCAAGAACATATTTGGACATAATCATTCCTCCGTTGATACTTTTCATGATGATAGACAATTTTTTTCATAAATCAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGTAGAAACCGCTCCTTGGAGAGTCTTCAAGCTAATGTGCAGAGGTTGAAGACTTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAGTTCAAGGTAACTCTTCCTAGTTCCAACTGCCAAAGCAATACAATTCATTAGTTACTATGCCATCTTTTCTATTTGTGGGACTGCCTTGATCTCTGATCATTTACATATCTGTTGATGTAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCCACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGATCACAGAAGATATGAAATCTTTCAAGGCCTATGACAAACTTCGTGTTGAGCGAGCGAATGCCCGCCATGTCGGTGCTCGGTTGAAGAAGGCTGCTGAGGCAGAGAAGGAAGATAAGAAGTAAATGGTTCCAAGGTTTTAACTGTGCGCCCATATGTTTTGAATGAAAATTCAAGTTTGCTATAGTGTTCGGCATTTAAATTTAGTATCTTTTTTCCATGCTTTATATGTGCAAACCTGAGTTATGAGTTCAATTTTGAAATGATTAGAGATTTTTTTTATGCATATCGAACATACGCAGTTTTCGTAAATGTTGCCTCCTATGGTTTCATACATTTTTTTATATGGTTATTTTGTGACTTATACATGC

mRNA sequence

ATGAAGCACAACAATGTTATTCCTAGTGGGCACTTTAGGAAGCACTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCCAGGAAAACAAGGAGAAGGAATGCTCGTCAAGAAAAGGCTGTGAAAAATTTCCCTCGCCCTACTGCTGGACCACTTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAGTTGAAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGTAGAAACCGCTCCTTGGAGAGTCTTCAAGCTAATGTGCAGAGGTTGAAGACTTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAGTTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCCACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGATCACAGAAGATATGAAATCTTTCAAGGCCTATGACAAACTTCGTGTTGAGCGAGCGAATGCCCGCCATGTCGGTGCTCGGTTGAAGAAGGCTGCTGAGGCAGAGAAGGAAGATAAGAAGTAA

Coding sequence (CDS)

ATGAAGCACAACAATGTTATTCCTAGTGGGCACTTTAGGAAGCACTGGCAAAATTATGTTAGAACTTGGTTCAACCAACCTGCCAGGAAAACAAGGAGAAGGAATGCTCGTCAAGAAAAGGCTGTGAAAAATTTCCCTCGCCCTACTGCTGGACCACTTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCTCTTTGGAAGAGTTGAAGGCAGCTGGCATTCCAAAGAAATATGCACCAACAATTGGCATTGCAGTTGATCATCGCCGTAGAAACCGCTCCTTGGAGAGTCTTCAAGCTAATGTGCAGAGGTTGAAGACTTACAAGGCCAAGGTGGTCGTCTTCCCACGACGTGCCCGCAAGTTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCCACCCAGGTCCAGGGCTCTTACATGTCTATTGGACTAGAGAAGCCATCAGTTGAGCTTGTGAAGATCACAGAAGATATGAAATCTTTCAAGGCCTATGACAAACTTCGTGTTGAGCGAGCGAATGCCCGCCATGTCGGTGCTCGGTTGAAGAAGGCTGCTGAGGCAGAGAAGGAAGATAAGAAGTAA

Protein sequence

MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKLRVERANARHVGARLKKAAEAEKEDKK
Homology
BLAST of Spg023040 vs. NCBI nr
Match: XP_004143667.1 (60S ribosomal protein L13-3 [Cucumis sativus] >KAA0055099.1 60S ribosomal protein L13-3-like [Cucumis melo var. makuwa] >KGN50340.1 hypothetical protein Csa_000560 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVKITEDMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           RVERANARHVGARLKKAAEAEKE+KK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

BLAST of Spg023040 vs. NCBI nr
Match: XP_008467320.1 (PREDICTED: 60S ribosomal protein L13-3-like [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-106
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVK+TEDMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKVTEDMKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           RVERANARHVGARLKKAAEAEKE+KK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

BLAST of Spg023040 vs. NCBI nr
Match: XP_022929155.1 (60S ribosomal protein L13-3-like [Cucurbita moschata] >KAG6579642.1 hypothetical protein SDJN03_24090, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017097.1 hypothetical protein SDJN02_22209 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106
Identity = 200/206 (97.09%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVKITED+KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARHVGARLK+AAEAEKE+KK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

BLAST of Spg023040 vs. NCBI nr
Match: XP_023550831.1 (60S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 4.5e-106
Identity = 199/206 (96.60%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVKITED+KSFKAYDK+
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARHVGARLK+AAEAEKE+KK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

BLAST of Spg023040 vs. NCBI nr
Match: XP_022969755.1 (60S ribosomal protein L13-3-like [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 7.7e-106
Identity = 199/206 (96.60%), Postives = 203/206 (98.54%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRN RQEKAVKNFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNVRQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVKITED+KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARHVGARLK+AAEAEKE+KK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy Swiss-Prot
Match: P41127 (60S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.0e-92
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T +MKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy Swiss-Prot
Match: Q9FF90 (60S ribosomal protein L13-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13D PE=1 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 6.6e-92
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   K ++ELVK+T D+K+FKAYDK+
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy Swiss-Prot
Match: P41128 (60S ribosomal protein L13-1 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.8e-90
Identity = 165/206 (80.10%), Postives = 186/206 (90.29%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELK+AGIPKK APTIGIAVDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDST EELA ATQVQG YM I  EK + ELVK+T +MKS KA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AA+AEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAADAEKEEKK 206

BLAST of Spg023040 vs. ExPASy Swiss-Prot
Match: P41129 (60S ribosomal protein L13-2 OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.6e-90
Identity = 164/206 (79.61%), Postives = 186/206 (90.29%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGI++DHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDST EELA ATQVQG YM I  EK ++ELVK+T +MKS  AYDK+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AA+AEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAADAEKEEKK 206

BLAST of Spg023040 vs. ExPASy Swiss-Prot
Match: Q9SMT4 (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13C PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.7e-79
Identity = 150/206 (72.82%), Postives = 171/206 (83.01%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+K W+NYV+T FNQPA KTRRR ARQ KAVK FPRPTAGP+RP+VH Q
Sbjct: 1   MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TL YNMKVRAG+GF+LEELKAAGIPKK APTIGI+VDH R+NRSLE  Q NVQRLKTYKA
Sbjct: 61  TLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPR AR  K GDS  +ELA ATQVQ  +M I  E P++ELVK+T DMK F AYDK+
Sbjct: 121 KLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+E  N RH G R K+AAEAEKE+KK
Sbjct: 181 RLEGINKRHAGVRAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy TrEMBL
Match: A0A5A7UNR2 (60S ribosomal protein L13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00250 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.7e-107
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVKITEDMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           RVERANARHVGARLKKAAEAEKE+KK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy TrEMBL
Match: A0A0A0KKX2 (60S ribosomal protein L13 OS=Cucumis sativus OX=3659 GN=Csa_5G168780 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.7e-107
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVKITEDMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           RVERANARHVGARLKKAAEAEKE+KK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy TrEMBL
Match: A0A1S3CTG8 (60S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103504700 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.5e-107
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKPSVELVK+TEDMKSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKVTEDMKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           RVERANARHVGARLKKAAEAEKE+KK
Sbjct: 181 RVERANARHVGARLKKAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy TrEMBL
Match: A0A6J1ETG8 (60S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111435822 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 200/206 (97.09%), Postives = 204/206 (99.03%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVKITED+KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARHVGARLK+AAEAEKE+KK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

BLAST of Spg023040 vs. ExPASy TrEMBL
Match: A0A6J1I0U7 (60S ribosomal protein L13 OS=Cucurbita maxima OX=3661 GN=LOC111468859 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.7e-106
Identity = 199/206 (96.60%), Postives = 203/206 (98.54%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRN RQEKAVKNFPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNVRQEKAVKNFPRPTAGPLRPIVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           KVVVFPRRARKFKAGDSTPEELATATQVQG YMSIGLEKPSVELVKITED+KSFKAYDKL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGPYMSIGLEKPSVELVKITEDLKSFKAYDKL 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARHVGARLK+AAEAEKE+KK
Sbjct: 181 RIERTNARHVGARLKRAAEAEKEEKK 206

BLAST of Spg023040 vs. TAIR 10
Match: AT3G49010.1 (breast basic conserved 1 )

HSP 1 Score: 340.9 bits (873), Expect = 7.2e-94
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T +MKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. TAIR 10
Match: AT3G49010.2 (breast basic conserved 1 )

HSP 1 Score: 340.9 bits (873), Expect = 7.2e-94
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T +MKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. TAIR 10
Match: AT3G49010.3 (breast basic conserved 1 )

HSP 1 Score: 340.9 bits (873), Expect = 7.2e-94
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRARK KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T +MKSFKA+DK+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. TAIR 10
Match: AT5G23900.1 (Ribosomal protein L13e family protein )

HSP 1 Score: 338.2 bits (866), Expect = 4.7e-93
Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR+NRSLE LQ+NVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+VVFPRR+R+ KAGDSTPEELA ATQVQG YM I   K ++ELVK+T D+K+FKAYDK+
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER NARH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK 206

BLAST of Spg023040 vs. TAIR 10
Match: AT3G49010.4 (breast basic conserved 1 )

HSP 1 Score: 334.7 bits (857), Expect = 5.2e-92
Identity = 166/206 (80.58%), Postives = 187/206 (90.78%), Query Frame = 0

Query: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQ 60
           MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120
           TLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR+NRSLE LQ NVQRLKTYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMSIGLEKPSVELVKITEDMKSFKAYDKL 180
           K+V+FPRRAR  KAGDSTPEELA ATQVQG Y+ I  EKP++ELVK+T +MKSFKA+DK+
Sbjct: 121 KLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 181 RVERANARHVGARLKKAAEAEKEDKK 207
           R+ER N RH GAR K+AAEAEKE+KK
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004143667.11.2e-10698.5460S ribosomal protein L13-3 [Cucumis sativus] >KAA0055099.1 60S ribosomal protei... [more]
XP_008467320.11.6e-10698.06PREDICTED: 60S ribosomal protein L13-3-like [Cucumis melo][more]
XP_022929155.12.6e-10697.0960S ribosomal protein L13-3-like [Cucurbita moschata] >KAG6579642.1 hypothetical... [more]
XP_023550831.14.5e-10696.6060S ribosomal protein L13-3-like [Cucurbita pepo subsp. pepo][more]
XP_022969755.17.7e-10696.6060S ribosomal protein L13-3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P411271.0e-9281.0760S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1[more]
Q9FF906.6e-9281.0760S ribosomal protein L13-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13D PE=1 SV=1[more]
P411282.8e-9080.1060S ribosomal protein L13-1 OS=Brassica napus OX=3708 PE=2 SV=1[more]
P411293.6e-9079.6160S ribosomal protein L13-2 OS=Brassica napus OX=3708 PE=2 SV=1[more]
Q9SMT41.7e-7972.82Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13C P... [more]
Match NameE-valueIdentityDescription
A0A5A7UNR25.7e-10798.5460S ribosomal protein L13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A0A0KKX25.7e-10798.5460S ribosomal protein L13 OS=Cucumis sativus OX=3659 GN=Csa_5G168780 PE=3 SV=1[more]
A0A1S3CTG87.5e-10798.0660S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103504700 PE=3 SV=1[more]
A0A6J1ETG81.3e-10697.0960S ribosomal protein L13 OS=Cucurbita moschata OX=3662 GN=LOC111435822 PE=3 SV=... [more]
A0A6J1I0U73.7e-10696.6060S ribosomal protein L13 OS=Cucurbita maxima OX=3661 GN=LOC111468859 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G49010.17.2e-9481.07breast basic conserved 1 [more]
AT3G49010.27.2e-9481.07breast basic conserved 1 [more]
AT3G49010.37.2e-9481.07breast basic conserved 1 [more]
AT5G23900.14.7e-9381.07Ribosomal protein L13e family protein [more]
AT3G49010.45.2e-9280.58breast basic conserved 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001380Ribosomal protein L13ePFAMPF01294Ribosomal_L13ecoord: 6..185
e-value: 1.2E-77
score: 259.8
IPR001380Ribosomal protein L13ePANTHERPTHR1172260S RIBOSOMAL PROTEIN L13coord: 2..206
IPR001380Ribosomal protein L13eHAMAPMF_00499Ribosomal_L13ecoord: 44..127
score: 21.640017
NoneNo IPR availableGENE3D1.20.5.110coord: 166..206
e-value: 9.7E-15
score: 56.3
NoneNo IPR availablePANTHERPTHR11722:SF1160S RIBOSOMAL PROTEIN L13coord: 2..206
IPR018256Ribosomal protein L13e, conserved sitePROSITEPS01104RIBOSOMAL_L13Ecoord: 69..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023040.1Spg023040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome