Spg023021 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023021
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein SDA1
Location	scaffold12: 30023098 .. 30025571 (+)
RNA-Seq Expression	Spg023021
Synteny	Spg023021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAGGGTTGGTGTGATGAGTCTAGAAAGCAAGTATTGGGCGCCTGGGGAAGGGCCAATACTTTGCTAAGTCATCGGTGCACCTTGAGTACAAATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACGTCGAGCTCCATAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACTGTCCGACTCGAAGGATCAGTCTTGGAGAGCCATGTGAGGGCTAAACATGAGTGTTGAGTGAGCTCATGGAGCATGAGTGGTTAGTGAGTTGCATAGAGAGATGCATGAGGTTTGGCTTAGGAGAGTCAATCATTTTACTCACTTTTGAGCATGTTGATGTGTTTATAGCTTTAAGATGTATGCTGTTTGCGCATGAAAAGCATGTTGTTTGCTTGGTTGTTGTTTGATGGCTTCTCAGGTAGGGGTTGCTTACCAGTACTGTGGTTGTACTGACCCCTTCCCCTTCTTTCCTCCAACATTTTAGTTAGATTATGCAGGTTATGAGGACTGCCTTGACCATGGTGATGCAGAGGAGACGCATGAGGAAGGACCATAGCTAGATAGCGTTATTTTCCTTTATATTCTTATCTTGGTTAGGGTAGTGTTGCTTTCATTGGTTGGACAACTGTTTGTTCTATTTGTTTTAGTTCTGAATCTATTCTTGTTGAATTCTAGGCTTAGTTGTGTTTGTTTTAAAGAACTCTATCTCTTCTTTTAGTTAATGATAATTAAGTTTGTTCGAATAAACTAAAGTTATAAGCTTTGTTAAGGTTGTGTTTTTGGTTAGATAGTCGTTGATAACACGAGACCTGACTCGCTTGTTTGTCTGGAGTTCTGCTGTGTTGTGGAAAATGTTATAGAAGTGTTACTCTTGTTCTAACAGGTCTTTGGAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGTTGCCGAAATTTTCGGTGCACTCGGTTAGTTTTGTCATGAGTTAGTAATGTCACTAGGTTAGTAGTTTATAAAAACATGGGGAGTTAGTAATTACCTAGCAGAAACAATGAGGCTGATGGAATCCTTATTTGAAGAACATCTGCATAATTCAACTTAACATGAAAAAGAATCCAAAAAAATACATCAACTGTTTTTGGACTCTTTGCTGCAATAGAAACTTGCAATTATAAATTTTATTTGTTGATTTGTATGATTTTACAGTCAGTCATACTCTTCTCTTGAACTCAGTTATTTCTTATAAGTAATTTAAGCTTCTTTTTTCGATTCAGGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGTGTTTGTTTAATTGACAGTGTTTTATATTGATCCTATCAACTTTGTGAACTCAAACTCAAAGTTCTATTGTTCTTTTTCAGGCCATTGTGGTTGGGCTCAATGCAGTAACCCATATATGTGAACGAATGCCTTTGGTAACTTTCATTACCTAGATGTTATAATGAGTATTTTATGTGATTTACTGTTTCTTCAATATTCTTGAACTCTTTCTATGTATTGCATGCCTTCATTTTATGTTTTCTTGATTTTATTATGTGTATTTATACACTTATTTTGATATGATGTGAACTTCTGTTTTTTTTTTTTTTTTGACGAAATCAAATACTATACCTTAATATGTTCTCTATTTTGTACTGGACTGGATGTAGATTAACTTACCAACATTTTTTATACTATAGGATTCTATCATGTGTCATGTAATGCAATTATTATTATTGATATTTTTTGTGTTTTCGGTAACTCTTTTTAATAGTAATCTTTTATCCTTGCTAACTAGTTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGGTATACATATAAAAATTTGACAAGTTCTCTCCATTTTTAATAGTGCATTCGTAGTGAGACAGCAGGCTGACAACTTCTATATTTGTAGATTTGCCCATCCTTCCTGGGTAAGAAGGATCGTGGCCGTCCTACTAATCCAAAGGCAAGACCGAATGCTTACGGGGAAGTATCTGAAGTATGCGATATTCCTGGTACCTAGTTACTACAACAGGATGATGATGGCAATAGTGACAGTGGATATGGGGATGGCAACGACACTGGCGATGAAAACAGTGAGCCTATTGCTAGTGGATTTGGTGACGACCTTGATCAAATGTTTGATTCTAGTGATGGAGAGAATCGGATCTCCTGTGATGTCGATTCAGCTGTTGAAGTTGATTTCAGTAATTTTACAGATGATGACAAAAGTGGCAGCCATTCTAGAGAGCTGGAATTGGAGATAGATGAGGAGGACGAAGATAGTGATGAAGAAGAAGAGCAAAGCACAACAAAGAGAGACAGAGAGTATCTCAGATGA

mRNA sequence

ATGGTCAAGGGTTGGTGTGATGAGTCTAGAAAGCAAGTATTGGGCGCCTGGGGAAGGGCCAATACTTTGCTAAGTCATCGGTGCACCTTGAGTACAAATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACGTCGAGCTCCATAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACTGTCCGACTCGAAGGATCAGTCTTGGAGAGCCATGTGAGGGCTAAACATGATTCTGAATCTATTCTTGTCTTTGGAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGTTGCCGAAATTTTCGGTGCACTCGCTTCTTTTTTCGATTCAGGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGCCATTGTGGTTGGGCTCAATGCATTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGTTACTACAACAGGATGATGATGGCAATAGTGACAGTGGATATGGGGATGGCAACGACACTGGCGATGAAAACAGTGAGCCTATTGCTAGTGGATTTGGTGACGACCTTGATCAAATGTTTGATTCTAGTGATGGAGAGAATCGGATCTCCTGTGATGTCGATTCAGCTGTTGAAGTTGATTTCAGTAATTTTACAGATGATGACAAAAGTGGCAGCCATTCTAGAGAGCTGGAATTGGAGATAGATGAGGAGGACGAAGATAGTGATGAAGAAGAAGAGCAAAGCACAACAAAGAGAGACAGAGAGTATCTCAGATGA

Coding sequence (CDS)

ATGGTCAAGGGTTGGTGTGATGAGTCTAGAAAGCAAGTATTGGGCGCCTGGGGAAGGGCCAATACTTTGCTAAGTCATCGGTGCACCTTGAGTACAAATGGCCAAGGGGTGATGCACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGGTCGAACGTCGAGCTCCATAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACTGTCCGACTCGAAGGATCAGTCTTGGAGAGCCATGTGAGGGCTAAACATGATTCTGAATCTATTCTTGTCTTTGGAAAATTTTGGGTTAGTCCTATGTATGTCGTTATGTTGCCGAAATTTTCGGTGCACTCGCTTCTTTTTTCGATTCAGGTTCCTCCTGATGCTGTTGAACCATTGTTCAAACAGATTGTAAATCAATTTGTGCACGATCGTTCACGAACAGAGGCCATTGTGGTTGGGCTCAATGCATTAATGACAGAAGGTTTGCTACAAGATCTTGCGTTGTACAAGAAATCCCGTGACAAGGCACTTTCTGGAGCTGCGCAATCACTTATTGCATCATTTCAATCGTTACTACAACAGGATGATGATGGCAATAGTGACAGTGGATATGGGGATGGCAACGACACTGGCGATGAAAACAGTGAGCCTATTGCTAGTGGATTTGGTGACGACCTTGATCAAATGTTTGATTCTAGTGATGGAGAGAATCGGATCTCCTGTGATGTCGATTCAGCTGTTGAAGTTGATTTCAGTAATTTTACAGATGATGACAAAAGTGGCAGCCATTCTAGAGAGCTGGAATTGGAGATAGATGAGGAGGACGAAGATAGTGATGAAGAAGAAGAGCAAAGCACAACAAAGAGAGACAGAGAGTATCTCAGATGA

Protein sequence

MVKGWCDESRKQVLGAWGRANTLLSHRCTLSTNGQGVMHSSRPWVQMVKGRTSSSIESIVALGTNGQGTVRLEGSVLESHVRAKHDSESILVFGKFWVSPMYVVMLPKFSVHSLLFSIQVPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNALMTEGLLQDLALYKKSRDKALSGAAQSLIASFQSLLQQDDDGNSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSSDGENRISCDVDSAVEVDFSNFTDDDKSGSHSRELELEIDEEDEDSDEEEEQSTTKRDREYLR

Homology

[Close]

BLAST of Spg023021 vs. NCBI nr
Match: XP_022149440.1 (protein SDA1 homolog [Momordica charantia])

HSP 1 Score: 139.4 bits (350), Expect = 4.8e-29
Identity = 108/209 (51.67%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDGN------SDSGYG--------------DGND 239
           +KA+S AA+SLI  F+    SLL + D G           YG                +D
Sbjct: 449 EKAVSIAARSLIGLFREICPSLLVKKDRGRPTDPKARPKAYGKVSVACDIPGAELLQHDD 508

Query: 240 TGD--ENSEPIASGFGDDLDQMFDSSDGENRISC------------DVDSAVEVDFSNFT 281
            GD  +NSEPI SG  DDL+QM DS DGE++IS             D+DS  EVD  N T
Sbjct: 509 DGDNSDNSEPIPSGSEDDLEQMVDSGDGEDQISDDSGTADEDELTEDLDSTSEVDSDNGT 568

[Close]

BLAST of Spg023021 vs. NCBI nr
Match: KAG6575976.1 (Protein SDA1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.5 bits (332), Expect = 5.9e-27
Identity = 105/219 (47.95%), Postives = 123/219 (56.16%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQSL------------------------------------LQQDDD 239
           +KA+S AA+SLI  F+ +                                    L QDDD
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPGIELLQDDD 508

Query: 240 G-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRISCDV-----------D 280
           G NSD G    +D GD++ E IA+G  DDL+Q  DSS DG+N+I  D             
Sbjct: 509 GVNSDDG---SDDDGDDDCETIATGSDDDLEQAVDSSDDGDNQIYSDSGTDDEDELTEDG 568

[Close]

BLAST of Spg023021 vs. NCBI nr
Match: XP_022953635.1 (protein SDA1 homolog [Cucurbita moschata])

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-26
Identity = 104/219 (47.49%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQSL------------------------------------LQQDDD 239
           +KA+S AA+SLI  F+ +                                    L QDDD
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPGIELLQDDD 508

Query: 240 G-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRISCDV-----------D 280
           G NSD G  D     D++ E IA+G  DDL+Q  DSS DG+N+I  D             
Sbjct: 509 GVNSDDGSDD-----DDDCETIATGSDDDLEQAVDSSDDGDNQIYSDSGTDYEDELTEDG 568

[Close]

BLAST of Spg023021 vs. NCBI nr
Match: XP_022991552.1 (protein SDA1 homolog [Cucurbita maxima])

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-25
Identity = 103/219 (47.03%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQSL------------------------------------LQQDDD 239
           +KA+S AA+SLI  F+ +                                    L QDDD
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPGIELLQDDD 508

Query: 240 G-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRISCDV-----------D 280
           G NSD    DG+D  D++ E IA+G  DDL+   DSS DG+N+I  D             
Sbjct: 509 GVNSD----DGSDDDDDDCETIATGSDDDLELAVDSSDDGDNQIYSDSGTDDEDELTEDG 568

[Close]

BLAST of Spg023021 vs. NCBI nr
Match: KAG7014500.1 (Protein SDA1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-25
Identity = 105/235 (44.68%), Postives = 123/235 (52.34%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA--------------------------L 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN                           L
Sbjct: 378 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLRKQRISFDLSNITKERL 437

Query: 180 MTEGLLQDLALYKKSRDKALSGAAQSLIASFQSL-------------------------- 239
           MTE LLQDLALYKKS +KA+S AA+SLI  F+ +                          
Sbjct: 438 MTEDLLQDLALYKKSHEKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEV 497

Query: 240 ----------LQQDDDG-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRI 280
                     L QDDDG NSD G    +D GD++ E IA+G  DDL+Q  DSS DG+N+I
Sbjct: 498 SVASDIPGIELLQDDDGVNSDDG---SDDDGDDDCETIATGSDDDLEQAVDSSDDGDNQI 557

[Close]

BLAST of Spg023021 vs. ExPASy Swiss-Prot
Match: A7S6A5 (Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.9e-10
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPP+ VEP  + IVN FV +R+  E + VGLNA          +MT+ LLQDLA YK S+
Sbjct: 360 VPPEVVEPGVRTIVNNFVTERNSHEVMAVGLNAVREVCQRCPLVMTDTLLQDLAQYKTSK 419

Query: 180 DKALSGAAQSLIASFQS----LLQQDDDG 195
           DK++  A+QSLI  F+S    LL + D G
Sbjct: 420 DKSVMMASQSLIQLFRSVNPNLLHKKDRG 448

[Close]

BLAST of Spg023021 vs. ExPASy Swiss-Prot
Match: A4IIB1 (Protein SDA1 homolog OS=Xenopus tropicalis OX=8364 GN=sdad1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAL----------MTEGLLQDLALYKKSR 179
           VPP+  + + + I N FV DR+  E + VG+NA+          MTE LLQDLALYK  +
Sbjct: 365 VPPEISQSVLRTIANNFVTDRNSGEVMTVGINAIKELTARCPLAMTEELLQDLALYKTHK 424

Query: 180 DKALSGAAQSLIASFQSL 188
           DK +S +A+SLI  F+SL
Sbjct: 425 DKNVSMSARSLIQLFRSL 442

[Close]

BLAST of Spg023021 vs. ExPASy Swiss-Prot
Match: Q9NEU2 (Protein SDA1 homolog OS=Caenorhabditis elegans OX=6239 GN=pro-3 PE=1 SV=4)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 58/222 (26.13%), Postives = 99/222 (44.59%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNAL----------MTEGLLQDLALYKKSR 179
           VPPD VE L + I N FV DR+  EA+ VG+NA+           TE LL+DL+ YK  +
Sbjct: 411 VPPDTVEQLIRVIANNFVTDRNSPEAMTVGINAIREILSNCPFAATEELLRDLSEYKTYK 470

Query: 180 DKALSGAAQSLIASFQSL-------------LQQDDDGNSDSGYG--------------- 239
           +K +S AA+SLI  F+++              ++DD+    +G+                
Sbjct: 471 NKNVSMAARSLITLFRAVNPKLLARKDRGKPQEKDDEDEEYNGFARPKVHDFISGAEILD 530

Query: 240 -------------DGNDT----GDENSEPIASGFGDDLDQMFDSSDGENRISCDVDSAVE 287
                        DG D+     D +++ + +   DD D+         + S + D+  +
Sbjct: 531 EDAADGEQGHLEEDGTDSELDVSDVDTDDVDT--DDDADEPVAKKKRVEQKSVENDAESD 590

[Close]

BLAST of Spg023021 vs. ExPASy Swiss-Prot
Match: Q7KKH3 (Protein SDA1 homolog OS=Drosophila melanogaster OX=7227 GN=Mys45A PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.9e-04
Identity = 53/184 (28.80%), Postives = 93/184 (50.54%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VP D +EP+ K I N F+ +R+ ++ + +GLNA           M E LLQDLA+YK  +
Sbjct: 365 VPGDIIEPILKTIANNFITERNSSDVMAIGLNATREICMRCPLAMGEDLLQDLAMYKTYK 424

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDGNSDSGYGDGNDTGDENSEPIASGFG-DDLDQ 239
           +K++  AA+SLI  ++    +LL + D G       +         E   +  G + L +
Sbjct: 425 EKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGEREVHDTVLGAEALLK 484

Query: 240 MFDSSDGENRISCDVDSAVEVDFSNFTDDDKSGSHSRELELEIDEEDEDSDEEEEQSTTK 289
              + D E+    D +    V+ ++ +D +  G+   E + + DE+D+D DE+EE S  +
Sbjct: 485 DSKTIDIESEDDTDSNDGEWVNVAH-SDGEGGGADDDEEDEDEDEDDDDEDEDEENSNDE 544

[Close]

BLAST of Spg023021 vs. ExPASy TrEMBL
Match: A0A6J1D5Q3 (Protein SDA1 OS=Momordica charantia OX=3673 GN=LOC111017865 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-29
Identity = 108/209 (51.67%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDGN------SDSGYG--------------DGND 239
           +KA+S AA+SLI  F+    SLL + D G           YG                +D
Sbjct: 449 EKAVSIAARSLIGLFREICPSLLVKKDRGRPTDPKARPKAYGKVSVACDIPGAELLQHDD 508

Query: 240 TGD--ENSEPIASGFGDDLDQMFDSSDGENRISC------------DVDSAVEVDFSNFT 281
            GD  +NSEPI SG  DDL+QM DS DGE++IS             D+DS  EVD  N T
Sbjct: 509 DGDNSDNSEPIPSGSEDDLEQMVDSGDGEDQISDDSGTADEDELTEDLDSTSEVDSDNGT 568

[Close]

BLAST of Spg023021 vs. ExPASy TrEMBL
Match: A0A6J1GQ82 (Protein SDA1 OS=Cucurbita moschata OX=3662 GN=LOC111456108 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-26
Identity = 104/219 (47.49%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQSL------------------------------------LQQDDD 239
           +KA+S AA+SLI  F+ +                                    L QDDD
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPGIELLQDDD 508

Query: 240 G-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRISCDV-----------D 280
           G NSD G  D     D++ E IA+G  DDL+Q  DSS DG+N+I  D             
Sbjct: 509 GVNSDDGSDD-----DDDCETIATGSDDDLEQAVDSSDDGDNQIYSDSGTDYEDELTEDG 568

[Close]

BLAST of Spg023021 vs. ExPASy TrEMBL
Match: A0A6J1JM56 (Protein SDA1 OS=Cucurbita maxima OX=3661 GN=LOC111488129 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-25
Identity = 103/219 (47.03%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQSL------------------------------------LQQDDD 239
           +KA+S AA+SLI  F+ +                                    L QDDD
Sbjct: 449 EKAISVAARSLIGLFREICPSLLVKKDRGRPTDPKAKPKAYGEVSVASDIPGIELLQDDD 508

Query: 240 G-NSDSGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRISCDV-----------D 280
           G NSD    DG+D  D++ E IA+G  DDL+   DSS DG+N+I  D             
Sbjct: 509 GVNSD----DGSDDDDDDCETIATGSDDDLELAVDSSDDGDNQIYSDSGTDDEDELTEDG 568

[Close]

BLAST of Spg023021 vs. ExPASy TrEMBL
Match: A0A1S3CDG0 (Protein SDA1 OS=Cucumis melo OX=3656 GN=LOC103499173 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-24
Identity = 104/209 (49.76%), Postives = 119/209 (56.94%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 389 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICMRMPLLMTEDLLQDLALYKKSH 448

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDG----------------------------NSD 239
           +KA+S AA+SLI  F+    SLL + D G                             +D
Sbjct: 449 EKAISIAARSLIGLFREYCPSLLAKKDRGRPTDPKARPKAYGEVAVASNIPGIELLREAD 508

Query: 240 SGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRIS------CDVDSAVEVDFSNF 280
               D ND GDE+SE IASG  DDLDQ+ DSS   +N++S       D DSA EVD    
Sbjct: 509 GDNSDDND-GDEDSEAIASGSDDDLDQVVDSSYADDNQMSSDEEELTDADSAPEVDSDEG 568

[Close]

BLAST of Spg023021 vs. ExPASy TrEMBL
Match: A0A5D3D6E9 (Protein SDA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00160 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-24
Identity = 104/209 (49.76%), Postives = 119/209 (56.94%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VPPDAVEPLFKQIVNQFVHDRSRTEAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 459 VPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICMRMPLLMTEDLLQDLALYKKSH 518

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDG----------------------------NSD 239
           +KA+S AA+SLI  F+    SLL + D G                             +D
Sbjct: 519 EKAISIAARSLIGLFREYCPSLLAKKDRGRPTDPKARPKAYGEVAVASNIPGIELLREAD 578

Query: 240 SGYGDGNDTGDENSEPIASGFGDDLDQMFDSS-DGENRIS------CDVDSAVEVDFSNF 280
               D ND GDE+SE IASG  DDLDQ+ DSS   +N++S       D DSA EVD    
Sbjct: 579 GDNSDDND-GDEDSEAIASGSDDDLDQVVDSSYADDNQMSSDEEELTDADSAPEVDSDEG 638

[Close]

BLAST of Spg023021 vs. TAIR 10
Match: AT1G13160.1 (ARM repeat superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.8e-19
Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYKKSR 179
           VP D VEPLFKQIVNQFVHD+SR EAI VGLN           LMTE LLQDLALYKKS 
Sbjct: 405 VPSDVVEPLFKQIVNQFVHDKSRPEAIAVGLNVVREMCLRVHDLMTEELLQDLALYKKSH 464

Query: 180 DKALSGAAQSLIASFQ----SLLQQDDDGNSDS------GYGDGN--------------- 239
           +KA+S AA+SLIA F+    SLL + D G   +       YG+ N               
Sbjct: 465 EKAISAAARSLIALFREINPSLLVKKDRGRPGATVFIPKHYGESNVFSNVPNVELLQESD 524

Query: 240 ----DTGDENSEPIASGFGDDLDQMF-------------DSSDGENRISCDVDSAVEVDF 283
                 GD++ + +    GDD++Q               DS+DG++  + + DS  ++D 
Sbjct: 525 NESGSDGDQDDDGVELPIGDDVEQELIPGDCGSEDKAEEDSNDGDDMNNTEDDS--DIDT 584

[Close]

BLAST of Spg023021 vs. TAIR 10
Match: AT4G31520.1 (SDA1 family protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.3e-10
Identity = 70/195 (35.90%), Postives = 93/195 (47.69%), Query Frame = 0


Query: 120 VPPDAVEPLFKQIVNQFVHDRSRTEAIVVGLNA----------LMTEGLLQDLALYK--- 179
           VP DAVEPLFKQIVN+F+HDRS  EAI V LN           LMTE LL DLA YK   
Sbjct: 321 VPSDAVEPLFKQIVNKFLHDRSSPEAIPVALNVVREMFLRIPELMTEDLLHDLAQYKTDK 380

Query: 180 --KSRDKALSGAAQSLIASFQS----LLQQDDDGN------SDSGYGDGNDTG------- 239
             ++  KA+S A+ SLIA F+     LL + D G           YG+ N          
Sbjct: 381 KYRTHRKAISAASASLIALFREINPLLLVKKDRGRPGGPIARPKKYGEVNVFSNVPNVDL 440

Query: 240 --DENSEPIASGFGDDLDQMFDSSDGENRISCDVDSAVEVDFSNFTDDDKSGSHSRELEL 281
             + + + +A    DD++Q   + D     S D D     D +N  DD        E + 
Sbjct: 441 LQESDDDEVALPGSDDIEQELITEDEAEEDSNDGD-----DMNNTEDDTLVSGDEEEEKN 500

The following BLAST results are available for this feature:

BLAST of Spg023021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149440.1	4.8e-29	51.67	protein SDA1 homolog [Momordica charantia]	[more]
KAG6575976.1	5.9e-27	47.95	Protein SDA1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022953635.1	3.8e-26	47.49	protein SDA1 homolog [Cucurbita moschata]	[more]
XP_022991552.1	3.2e-25	47.03	protein SDA1 homolog [Cucurbita maxima]	[more]
KAG7014500.1	4.2e-25	44.68	Protein SDA1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg023021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7S6A5	8.9e-10	47.19	Protein SDA1 homolog OS=Nematostella vectensis OX=45351 GN=sdad1 PE=3 SV=1	[more]
A4IIB1	4.4e-09	46.15	Protein SDA1 homolog OS=Xenopus tropicalis OX=8364 GN=sdad1 PE=2 SV=1	[more]
Q9NEU2	3.9e-05	26.13	Protein SDA1 homolog OS=Caenorhabditis elegans OX=6239 GN=pro-3 PE=1 SV=4	[more]
Q7KKH3	1.9e-04	28.80	Protein SDA1 homolog OS=Drosophila melanogaster OX=7227 GN=Mys45A PE=1 SV=1	[more]

BLAST of Spg023021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5Q3	2.3e-29	51.67	Protein SDA1 OS=Momordica charantia OX=3673 GN=LOC111017865 PE=3 SV=1	[more]
A0A6J1GQ82	1.9e-26	47.49	Protein SDA1 OS=Cucurbita moschata OX=3662 GN=LOC111456108 PE=3 SV=1	[more]
A0A6J1JM56	1.6e-25	47.03	Protein SDA1 OS=Cucurbita maxima OX=3661 GN=LOC111488129 PE=3 SV=1	[more]
A0A1S3CDG0	3.0e-24	49.76	Protein SDA1 OS=Cucumis melo OX=3656 GN=LOC103499173 PE=3 SV=1	[more]
A0A5D3D6E9	3.0e-24	49.76	Protein SDA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00160 P...	[more]

BLAST of Spg023021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13160.1	4.8e-19	38.14	ARM repeat superfamily protein	[more]
AT4G31520.1	5.3e-10	35.90	SDA1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 260..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..234
IPR027312	Sda1	PANTHER	PTHR12730	HSDA/SDA1-RELATED	coord: 119..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023021.1	Spg023021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus