Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAATAGGCGGTGGAGGAGAATTATTGTTGCAATTTACGGCACTGAGACAAATGGTTGGCTTCCTAAACAAACCAGGGGGGGTTGCTGGAGGAAGGCCATGGGTGGATATTGACAAAAACAGAGATCTTTTCCTTGAGCTAGTGAAGTTCAAAGTGGGCAGAGGCTCAAAAATTCAGTTCTGGGAAGACGCCTGGGCCACAGATGTTTGCTCCACACAAGTACCCTTATCTTTATGCCTTATTTTCAAAAAAGGAGGCTTTGGTTTCAGATTGCCTGTCGGTTTCTGCAAATGCTTGGGATTTGGGGTTAAAGAGGCACCTTTGATAGAGAGCTTCCTAGATGGACCGGTTTTATAG
mRNA sequence
ATGAAGAAAATAGGCGGTGGAGGAGAATTATTGTTGCAATTTACGGCACTGAGACAAATGGTTGGCTTCCTAAACAAACCAGGGGGGGTTGCTGGAGGAAGGCCATGGGTGGATATTGACAAAAACAGAGATCTTTTCCTTGAGCTAGTGAAGTTCAAAGTGGGCAGAGGCTCAAAAATTCAGTTCTGGGAAGACGCCTGGGCCACAGATGTTTGCTCCACACAAGTACCCTTATCTTTATGCCTTATTTTCAAAAAAGGAGGCTTTGGTTTCAGATTGCCTGTCGGTTTCTGCAAATGCTTGGGATTTGGGGTTAAAGAGGCACCTTTGATAGAGAGCTTCCTAGATGGACCGGTTTTATAG
Coding sequence (CDS)
ATGAAGAAAATAGGCGGTGGAGGAGAATTATTGTTGCAATTTACGGCACTGAGACAAATGGTTGGCTTCCTAAACAAACCAGGGGGGGTTGCTGGAGGAAGGCCATGGGTGGATATTGACAAAAACAGAGATCTTTTCCTTGAGCTAGTGAAGTTCAAAGTGGGCAGAGGCTCAAAAATTCAGTTCTGGGAAGACGCCTGGGCCACAGATGTTTGCTCCACACAAGTACCCTTATCTTTATGCCTTATTTTCAAAAAAGGAGGCTTTGGTTTCAGATTGCCTGTCGGTTTCTGCAAATGCTTGGGATTTGGGGTTAAAGAGGCACCTTTGATAGAGAGCTTCCTAGATGGACCGGTTTTATAG
Protein sequence
MKKIGGGGELLLQFTALRQMVGFLNKPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLCLIFKKGGFGFRLPVGFCKCLGFGVKEAPLIESFLDGPVL
Homology
BLAST of Spg022771 vs. NCBI nr
Match:
XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])
HSP 1 Score: 58.2 bits (139), Expect = 5.8e-05
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0
Query: 22 GFLNK-PGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWA 69
G+L K P G A GRPW DI KN F E+V FK +G ++ FW D WA
Sbjct: 274 GWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKWA 321
BLAST of Spg022771 vs. NCBI nr
Match:
RVW41121.1 (hypothetical protein CK203_069690 [Vitis vinifera])
HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 27/56 (48.21%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG R W +I K D E + F VG+GSKI+FW+D W TD PLS C
Sbjct: 89 KVSGAAGVRVWKEIMKESDWCWENLSFLVGKGSKIKFWKDRWCTD-----TPLSQC 139
BLAST of Spg022771 vs. NCBI nr
Match:
CAN73460.1 (hypothetical protein VITISV_033905 [Vitis vinifera])
HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG W +I K D E + F VG+GSKI+FW+D W TD +PLS C
Sbjct: 254 KVRGAAGAGVWKEIMKESDWCWENLAFVVGKGSKIKFWKDRWCTD-----IPLSQC 304
BLAST of Spg022771 vs. NCBI nr
Match:
CAN70311.1 (hypothetical protein VITISV_022886 [Vitis vinifera])
HSP 1 Score: 55.1 bits (131), Expect = 4.9e-04
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG W +I K D E + F VG+GSKI+FW+D W TD +PLS C
Sbjct: 1769 KVSGAAGVXVWKEIMKESDWCWENLAFIVGKGSKIKFWKDRWCTD-----IPLSQC 1819
BLAST of Spg022771 vs. NCBI nr
Match:
RVX13534.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 54.7 bits (130), Expect = 6.4e-04
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG W +I K D E + F VG+GSKI+FW+D W TD +PLS C
Sbjct: 875 KVSGAAGVGVWKEIMKESDWCWENLAFIVGKGSKIKFWKDRWCTD-----IPLSQC 925
BLAST of Spg022771 vs. ExPASy TrEMBL
Match:
A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.8e-05
Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 0
Query: 22 GFLNK-PGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWA 69
G+L K P G A GRPW DI KN F E+V FK +G ++ FW D WA
Sbjct: 274 GWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKWA 321
BLAST of Spg022771 vs. ExPASy TrEMBL
Match:
A0A2N9IM54 (Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53236 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 3.7e-05
Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 0
Query: 1 MKKIGGGGELLLQFTALRQMVGFLNKPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKI 60
+K + G E LLQ T +VG ++ GG G W I LE ++F VGRG +I
Sbjct: 1231 LKNLIYGEESLLQNTVRNGVVGSPSRIGGAHGCGLWKSISMGWGTLLEQIRFSVGRGDRI 1290
Query: 61 QFWEDAWATD 71
+FW+D W D
Sbjct: 1291 RFWKDKWCGD 1300
BLAST of Spg022771 vs. ExPASy TrEMBL
Match:
A0A2N9FB74 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12260 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 3.7e-05
Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 0
Query: 1 MKKIGGGGELLLQFTALRQMVGFLNKPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKI 60
+K + G E LLQ T +VG ++ GG G W I LE ++F VGRG +I
Sbjct: 1257 LKNLIYGEESLLQNTVRNGVVGSPSRIGGAHGCGLWKSISMGWGTLLEQIRFSVGRGDRI 1316
Query: 61 QFWEDAWATD 71
+FW+D W D
Sbjct: 1317 RFWKDKWCGD 1326
BLAST of Spg022771 vs. ExPASy TrEMBL
Match:
A0A438E023 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_069690 PE=4 SV=1)
HSP 1 Score: 57.0 bits (136), Expect = 6.3e-05
Identity = 27/56 (48.21%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG R W +I K D E + F VG+GSKI+FW+D W TD PLS C
Sbjct: 89 KVSGAAGVRVWKEIMKESDWCWENLSFLVGKGSKIKFWKDRWCTD-----TPLSQC 139
BLAST of Spg022771 vs. ExPASy TrEMBL
Match:
A5AJ71 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033905 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 1.8e-04
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 26 KPGGVAGGRPWVDIDKNRDLFLELVKFKVGRGSKIQFWEDAWATDVCSTQVPLSLC 82
K G AG W +I K D E + F VG+GSKI+FW+D W TD +PLS C
Sbjct: 254 KVRGAAGAGVWKEIMKESDWCWENLAFVVGKGSKIKFWKDRWCTD-----IPLSQC 304
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158566.1 | 5.8e-05 | 52.08 | uncharacterized protein LOC111025019 [Momordica charantia] | [more] |
RVW41121.1 | 1.3e-04 | 48.21 | hypothetical protein CK203_069690 [Vitis vinifera] | [more] |
CAN73460.1 | 3.8e-04 | 46.43 | hypothetical protein VITISV_033905 [Vitis vinifera] | [more] |
CAN70311.1 | 4.9e-04 | 46.43 | hypothetical protein VITISV_022886 [Vitis vinifera] | [more] |
RVX13534.1 | 6.4e-04 | 46.43 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E196 | 2.8e-05 | 52.08 | uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A2N9IM54 | 3.7e-05 | 38.57 | Non-specific serine/threonine protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_... | [more] |
A0A2N9FB74 | 3.7e-05 | 38.57 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12260 PE=4 SV=1 | [more] |
A0A438E023 | 6.3e-05 | 48.21 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_069690 PE=4 SV=1 | [more] |
A5AJ71 | 1.8e-04 | 46.43 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033905 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |