Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACAAACCATTTAAACTAAGAATGGAAAAGAAAACAAAAACGACACAATAAATTCAGTGGTCAATTCAATAAAGGCCTCTGTCTGCAGTAGCAGCTCAATTTGGATTGACCATCAACAGTTCCATATCTCACCCACATGGCTCAACACACCCACCCACCTCCTCCATCACTCCCATAGCTCTCAATCTTACAAATCCATGGCTTCCCATCAAACTTCACACCAACCCCTATTATCACCTCCCTCATCCATGGACCCCCACCGTAGAAACCAACCCACCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCTGCCGCTGCCTCTCCACACCCAACATCACCAAAACCAAATCCCACAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCTCCAAAAGTTGATTCCATTTCTCTTCACTCCAAGCCCAAAATGGTCGGCCCCAGAACAGTGCAAAAAGTAGCCAAAAAACCCAACGAAAACCCCAATGATTCCGAAGAAAAACTCGAACGCATGATCAACTGTATCAACGCCAAAGAAAGGGAAATGAAACAGCTCTTACAGGAACACGAACATCTCACTCGCAGGCTCTCTGTTTCGCTGTCTTCATCGCGGAGTGGAAGAAGAAGATCAATCTGTGGCTCACAGATTCAGCTAGCAGACGTTTTCGCCAACAATGGGGTCAGATTGGTTTCCGCCGATATGCCGCCGTTTATGCAGATCCACGCCGTCGATTGCGCGAGAAAGACCCACGACAGTATGGAAAAGTTCACTTCAAAATCGCTCGCGTTGAGTCTGAAGAAGGTAGATAGAATCATAGAAATCAATTAGTTTATCATTTCCCACTTCTTTTTTCTTGTTCTGAATTGGATTTGAGGGTTTGTTTGTTCAGAATGTTGATTTTGGTTGGTTGATTTTGACAGGAATTCGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTGACACATTCAGTGGGTGGATTTCTGTACTTTTCCATGGCTCAAAAGCTTTACATTCTGCTCTTCAAAACCACTGTACAAAGAGCCAATTAGAAATACTGAATCGCTGTGATCATGTTTAG
mRNA sequence
ATGGCTTCCCATCAAACTTCACACCAACCCCTATTATCACCTCCCTCATCCATGGACCCCCACCGTAGAAACCAACCCACCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCTGCCGCTGCCTCTCCACACCCAACATCACCAAAACCAAATCCCACAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCTCCAAAAGTTGATTCCATTTCTCTTCACTCCAAGCCCAAAATGGTCGGCCCCAGAACAGTGCAAAAAGTAGCCAAAAAACCCAACGAAAACCCCAATGATTCCGAAGAAAAACTCGAACGCATGATCAACTGTATCAACGCCAAAGAAAGGGAAATGAAACAGCTCTTACAGGAACACGAACATCTCACTCGCAGGCTCTCTGTTTCGCTGTCTTCATCGCGGAGTGGAAGAAGAAGATCAATCTGTGGCTCACAGATTCAGCTAGCAGACGTTTTCGCCAACAATGGGGTCAGATTGGTTTCCGCCGATATGCCGCCGTTTATGCAGATCCACGCCGTCGATTGCGCGAGAAAGACCCACGACAGTATGGAAAAGTTCACTTCAAAATCGCTCGCGTTGAGTCTGAAGAAGAATGTTGATTTTGGTTGGTTGATTTTGACAGGAATTCGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTGACACATTCAGTGGGTGGATTTCTGTACTTTTCCATGGCTCAAAAGCTTTACATTCTGCTCTTCAAAACCACTGTACAAAGAGCCAATTAGAAATACTGAATCGCTGTGATCATGTTTAG
Coding sequence (CDS)
ATGGCTTCCCATCAAACTTCACACCAACCCCTATTATCACCTCCCTCATCCATGGACCCCCACCGTAGAAACCAACCCACCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCTGCCGCTGCCTCTCCACACCCAACATCACCAAAACCAAATCCCACAACCCCTTTGTCCGACTCAGACAACTTGTCAAAATCACACCCACCTTCTCCAAAAGTTGATTCCATTTCTCTTCACTCCAAGCCCAAAATGGTCGGCCCCAGAACAGTGCAAAAAGTAGCCAAAAAACCCAACGAAAACCCCAATGATTCCGAAGAAAAACTCGAACGCATGATCAACTGTATCAACGCCAAAGAAAGGGAAATGAAACAGCTCTTACAGGAACACGAACATCTCACTCGCAGGCTCTCTGTTTCGCTGTCTTCATCGCGGAGTGGAAGAAGAAGATCAATCTGTGGCTCACAGATTCAGCTAGCAGACGTTTTCGCCAACAATGGGGTCAGATTGGTTTCCGCCGATATGCCGCCGTTTATGCAGATCCACGCCGTCGATTGCGCGAGAAAGACCCACGACAGTATGGAAAAGTTCACTTCAAAATCGCTCGCGTTGAGTCTGAAGAAGAATGTTGATTTTGGTTGGTTGATTTTGACAGGAATTCGATGGGGTTTACGGGCCGGCATGGCATTGTATTGTGGGGAAGAGTTTTGGGTCATTTGTGACACATTCAGTGGGTGGATTTCTGTACTTTTCCATGGCTCAAAAGCTTTACATTCTGCTCTTCAAAACCACTGTACAAAGAGCCAATTAGAAATACTGAATCGCTGTGATCATGTTTAG
Protein sequence
MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDNLSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENPNDSEEKLERMINCINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSADMPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVDFGWLILTGIRWGLRAGMALYCGEEFWVICDTFSGWISVLFHGSKALHSALQNHCTKSQLEILNRCDHV
Homology
BLAST of Spg022420 vs. NCBI nr
Match:
XP_022972898.1 (uncharacterized protein LOC111471403 [Cucurbita maxima])
HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 172/233 (73.82%), Postives = 185/233 (79.40%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASHQTSHQ LLSPP MD HRR QPT AAA SPHPTSPK +P TPLSDSDN
Sbjct: 15 MASHQTSHQRLLSPPPKMDLHRRTQPT-----TPAAATTVSPHPTSPKLDPITPLSDSDN 74
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSPKV +SLHS PKMVGPRTV K AKKPNE P NDSEEK ERMIN
Sbjct: 75 LSKSHPPSPKVVPVSLHSNPKMVGPRTVHKQAKKPNETPRQHSTTEKFNDSEEKFERMIN 134
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI KEREMKQLL +H+HLTRRLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSAD
Sbjct: 135 CITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSAD 194
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSMEKFTSKSLALSLK+ D +G W + G +G
Sbjct: 195 MPPFMQIHAVDCARKAHDSMEKFTSKSLALSLKQEFDGAYGPAWHCIVGKSFG 242
BLAST of Spg022420 vs. NCBI nr
Match:
KAG6587507.1 (Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 303.5 bits (776), Expect = 1.8e-78
Identity = 172/233 (73.82%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASHQTS Q LLSPPS MD HRR QPT AAA A SPHPTSPK +PTTPLSDSDN
Sbjct: 1 MASHQTSLQRLLSPPSKMDLHRRTQPT-----TPAAATAVSPHPTSPKLDPTTPLSDSDN 60
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSPKV +SLHS PKMVGPRTV K+AKKPNE P NDSEEK ERMIN
Sbjct: 61 LSKSHPPSPKVVPVSLHSNPKMVGPRTVHKLAKKPNETPRQHSTTEKFNDSEEKFERMIN 120
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI KEREMKQLL +H+HLTRRLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSAD
Sbjct: 121 CITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSAD 180
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSM+ FTSKSLALSLK+ D +G W + G +G
Sbjct: 181 MPPFMQIHAVDCARKAHDSMQNFTSKSLALSLKQEFDGSYGPAWHCIVGKSFG 228
BLAST of Spg022420 vs. NCBI nr
Match:
XP_022933432.1 (uncharacterized protein LOC111440848 [Cucurbita moschata])
HSP 1 Score: 303.5 bits (776), Expect = 1.8e-78
Identity = 172/233 (73.82%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASHQTS Q LLSPPS MD HRR QPT AAA A SPHPTSPK +PTTPLSDSDN
Sbjct: 15 MASHQTSLQRLLSPPSKMDLHRRTQPT-----TPAAATAVSPHPTSPKLDPTTPLSDSDN 74
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSPKV +SLHS PKMVGPRTV K+AKKPNE P NDSEEK ERMIN
Sbjct: 75 LSKSHPPSPKVVPVSLHSNPKMVGPRTVHKLAKKPNETPRQHSTTEKFNDSEEKFERMIN 134
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI KEREMKQLL +H+HLTRRLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSAD
Sbjct: 135 CITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSAD 194
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSM+ FTSKSLALSLK+ D +G W + G +G
Sbjct: 195 MPPFMQIHAVDCARKAHDSMQNFTSKSLALSLKQEFDGSYGPAWHCIVGKSFG 242
BLAST of Spg022420 vs. NCBI nr
Match:
XP_038879954.1 (uncharacterized protein LOC120071657 [Benincasa hispida])
HSP 1 Score: 301.6 bits (771), Expect = 7.0e-78
Identity = 176/233 (75.54%), Postives = 188/233 (80.69%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASH TS S SMDPHRRNQP A A+A A SPHPTSPK +PTTPLSDSDN
Sbjct: 1 MASHNTS-----SSSKSMDPHRRNQPPA--AAAVVTPAVVSPHPTSPKLDPTTPLSDSDN 60
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKS+PPSPKVDSISLHS PKMVGP TVQKVAKKPNE P NDSEE+ ERMIN
Sbjct: 61 LSKSNPPSPKVDSISLHSHPKMVGPITVQKVAKKPNETPQEHSTTEKFNDSEERYERMIN 120
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI AKEREMKQLL+EHEHLTRRLSVSLSSSRSGRR+SIC SQIQLADVFANNGV++VSAD
Sbjct: 121 CITAKEREMKQLLKEHEHLTRRLSVSLSSSRSGRRKSICVSQIQLADVFANNGVKVVSAD 180
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARKTHDSMEKFTSKSLAL+LKK D +G W + G +G
Sbjct: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 226
BLAST of Spg022420 vs. NCBI nr
Match:
KAG6587511.1 (hypothetical protein SDJN03_16076, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 148/196 (75.51%), Postives = 161/196 (82.14%), Query Frame = 0
Query: 82 MVGPRTVQKVAKKPNENP---------NDSEEKLERMINCINAKEREMKQLLQEHEHLTR 141
MVGPRTV K+AKKPNE P NDSEEK ERMINCI KEREMKQLL +H+HLTR
Sbjct: 1 MVGPRTVHKLAKKPNETPRQHSTTEKFNDSEEKFERMINCITTKEREMKQLLVDHQHLTR 60
Query: 142 RLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSADMPPFMQIHAVDCARKTHDSME 201
RLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSADMPPFMQIHAVDCARK HDSM+
Sbjct: 61 RLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSADMPPFMQIHAVDCARKAHDSMQ 120
Query: 202 KFTSKSLALSLKKNVDFGWLILTGIRWGLRAGMALYCGEEFWVICDTFSGWISVLFHGSK 261
FTSKSLALSLK+ D + AGMALYCGE+FW+ICDTFSGWI V F GSK
Sbjct: 121 NFTSKSLALSLKQEFDGSY----------GAGMALYCGEKFWIICDTFSGWIPVFFPGSK 180
Query: 262 ALHSALQNHCTKSQLE 269
ALHSALQNHCTKSQLE
Sbjct: 181 ALHSALQNHCTKSQLE 186
BLAST of Spg022420 vs. ExPASy TrEMBL
Match:
A0A6J1IBG1 (uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403 PE=4 SV=1)
HSP 1 Score: 303.9 bits (777), Expect = 6.8e-79
Identity = 172/233 (73.82%), Postives = 185/233 (79.40%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASHQTSHQ LLSPP MD HRR QPT AAA SPHPTSPK +P TPLSDSDN
Sbjct: 15 MASHQTSHQRLLSPPPKMDLHRRTQPT-----TPAAATTVSPHPTSPKLDPITPLSDSDN 74
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSPKV +SLHS PKMVGPRTV K AKKPNE P NDSEEK ERMIN
Sbjct: 75 LSKSHPPSPKVVPVSLHSNPKMVGPRTVHKQAKKPNETPRQHSTTEKFNDSEEKFERMIN 134
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI KEREMKQLL +H+HLTRRLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSAD
Sbjct: 135 CITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSAD 194
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSMEKFTSKSLALSLK+ D +G W + G +G
Sbjct: 195 MPPFMQIHAVDCARKAHDSMEKFTSKSLALSLKQEFDGAYGPAWHCIVGKSFG 242
BLAST of Spg022420 vs. ExPASy TrEMBL
Match:
A0A6J1EZR5 (uncharacterized protein LOC111440848 OS=Cucurbita moschata OX=3662 GN=LOC111440848 PE=4 SV=1)
HSP 1 Score: 303.5 bits (776), Expect = 8.9e-79
Identity = 172/233 (73.82%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASHQTS Q LLSPPS MD HRR QPT AAA A SPHPTSPK +PTTPLSDSDN
Sbjct: 15 MASHQTSLQRLLSPPSKMDLHRRTQPT-----TPAAATAVSPHPTSPKLDPTTPLSDSDN 74
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSPKV +SLHS PKMVGPRTV K+AKKPNE P NDSEEK ERMIN
Sbjct: 75 LSKSHPPSPKVVPVSLHSNPKMVGPRTVHKLAKKPNETPRQHSTTEKFNDSEEKFERMIN 134
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI KEREMKQLL +H+HLTRRLSVSLSSSRSGRR+SICGSQIQLA++FANNGV++VSAD
Sbjct: 135 CITTKEREMKQLLVDHQHLTRRLSVSLSSSRSGRRKSICGSQIQLAELFANNGVKVVSAD 194
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSM+ FTSKSLALSLK+ D +G W + G +G
Sbjct: 195 MPPFMQIHAVDCARKAHDSMQNFTSKSLALSLKQEFDGSYGPAWHCIVGKSFG 242
BLAST of Spg022420 vs. ExPASy TrEMBL
Match:
A0A6J1E0M2 (uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC111429742 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 4.1e-68
Identity = 162/234 (69.23%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MASH+TS SS+DP+RRN P AA+A++ AA SP+PTS K +P TPLSDSD
Sbjct: 1 MASHETS--------SSIDPNRRNHPAAAAAASVVTLAAVSPNPTSSKLDPITPLSDSDK 60
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPS PKMVGPRTVQ VAKKPNE P NDSEEK ERMIN
Sbjct: 61 LSKSHPPS-----------PKMVGPRTVQMVAKKPNEAPLERSTTEKFNDSEEKFERMIN 120
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSG-RRRSICGSQIQLADVFANNGVRLVSA 180
CI AKEREMKQLL+EHEHLTRRLSVSLSSSRSG RRRSICGSQI+LADVFANNGV++VSA
Sbjct: 121 CITAKEREMKQLLKEHEHLTRRLSVSLSSSRSGRRRRSICGSQIELADVFANNGVKVVSA 180
Query: 181 DMPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
DMPPFMQIHAVDCARK HDSMEKFTSKSLAL+LKK D +G W + G +G
Sbjct: 181 DMPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 215
BLAST of Spg022420 vs. ExPASy TrEMBL
Match:
A0A5A7UPX5 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002210 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 9.9e-62
Identity = 152/233 (65.24%), Postives = 165/233 (70.82%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MA+H T+ S SMDPH RNQP A A A A SPHPTSPK +P TPLSDSDN
Sbjct: 1 MATHNTT-----SSSKSMDPHLRNQPPDA-AVAVVTPAVVSPHPTSPKLDPPTPLSDSDN 60
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSP VGPRT QKVAKK NE P N SEE+ E MIN
Sbjct: 61 LSKSHPPSP-------------VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMIN 120
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI AKEREMKQLL+EHEH+TRRLS+SLSSSRSGRRRS GSQIQL DVFA NG ++VSAD
Sbjct: 121 CITAKEREMKQLLKEHEHVTRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSAD 180
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSMEKFTSKSLAL+LKK D +G W + G +G
Sbjct: 181 MPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 214
BLAST of Spg022420 vs. ExPASy TrEMBL
Match:
A0A1S3BVI8 (uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=4 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 9.9e-62
Identity = 152/233 (65.24%), Postives = 165/233 (70.82%), Query Frame = 0
Query: 1 MASHQTSHQPLLSPPSSMDPHRRNQPTAASASAAAAAAAASPHPTSPKPNPTTPLSDSDN 60
MA+H T+ S SMDPH RNQP A A A A SPHPTSPK +P TPLSDSDN
Sbjct: 1 MATHNTT-----SSSKSMDPHLRNQPPDA-AVAVVTPAVVSPHPTSPKLDPPTPLSDSDN 60
Query: 61 LSKSHPPSPKVDSISLHSKPKMVGPRTVQKVAKKPNENP---------NDSEEKLERMIN 120
LSKSHPPSP VGPRT QKVAKK NE P N SEE+ E MIN
Sbjct: 61 LSKSHPPSP-------------VGPRTEQKVAKKLNETPQEHTTTEKFNGSEERFEHMIN 120
Query: 121 CINAKEREMKQLLQEHEHLTRRLSVSLSSSRSGRRRSICGSQIQLADVFANNGVRLVSAD 180
CI AKEREMKQLL+EHEH+TRRLS+SLSSSRSGRRRS GSQIQL DVFA NG ++VSAD
Sbjct: 121 CITAKEREMKQLLKEHEHVTRRLSISLSSSRSGRRRSFYGSQIQLGDVFAKNGAKVVSAD 180
Query: 181 MPPFMQIHAVDCARKTHDSMEKFTSKSLALSLKKNVD--FG--WLILTGIRWG 221
MPPFMQIHAVDCARK HDSMEKFTSKSLAL+LKK D +G W + G +G
Sbjct: 181 MPPFMQIHAVDCARKAHDSMEKFTSKSLALTLKKEFDGVYGPAWHCIVGKSFG 214
BLAST of Spg022420 vs. TAIR 10
Match:
AT5G20110.1 (Dynein light chain type 1 family protein )
HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 0
Query: 78 SKPKMVGPRTVQKVAKKPNENPNDSEEKLERMINCINAKEREMKQLLQEHEHLTRRLSVS 137
SK ++ P++ K+ P P+ S++++E + + + ++++ L S +
Sbjct: 25 SKHSLINPKSKPKI---PISTPSISQQEVEEK-PIVQSNKSHQNHVMRDIFELETTCSRN 84
Query: 138 LSSSRSG-----RRRSI------CGSQIQLADVFANNGVRLVSADMPPFMQIHAVDCARK 197
+ G R+S+ ++I+ A VR+++ADMP FMQ HA CAR
Sbjct: 85 NERKKGGGAAEEGRKSVSHVERDTAARIEAAAEMLT--VRILAADMPGFMQAHAFRCARM 144
Query: 198 THDSMEKFTSKSLALSLKKNVDFG----WLILTGIRWG 221
T DS+EKF+SK +A +LKK D G W + G +G
Sbjct: 145 TLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFG 176
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022972898.1 | 1.4e-78 | 73.82 | uncharacterized protein LOC111471403 [Cucurbita maxima] | [more] |
| KAG6587507.1 | 1.8e-78 | 73.82 | Dynein light chain, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| XP_022933432.1 | 1.8e-78 | 73.82 | uncharacterized protein LOC111440848 [Cucurbita moschata] | [more] |
| XP_038879954.1 | 7.0e-78 | 75.54 | uncharacterized protein LOC120071657 [Benincasa hispida] | [more] |
| KAG6587511.1 | 1.8e-73 | 75.51 | hypothetical protein SDJN03_16076, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1IBG1 | 6.8e-79 | 73.82 | uncharacterized protein LOC111471403 OS=Cucurbita maxima OX=3661 GN=LOC111471403... | [more] |
| A0A6J1EZR5 | 8.9e-79 | 73.82 | uncharacterized protein LOC111440848 OS=Cucurbita moschata OX=3662 GN=LOC1114408... | [more] |
| A0A6J1E0M2 | 4.1e-68 | 69.23 | uncharacterized protein LOC111429742 OS=Cucurbita moschata OX=3662 GN=LOC1114297... | [more] |
| A0A5A7UPX5 | 9.9e-62 | 65.24 | Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
| A0A1S3BVI8 | 9.9e-62 | 65.24 | uncharacterized protein LOC103493957 OS=Cucumis melo OX=3656 GN=LOC103493957 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G20110.1 | 2.4e-07 | 29.11 | Dynein light chain type 1 family protein | [more] |
