Spg020924 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020924
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Locationscaffold9: 3181076 .. 3185684 (-)
RNA-Seq ExpressionSpg020924
SyntenySpg020924
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACGAGCTACAGTCGCATCCTAATCGCTCGCAGCCACCTCGAACCCACAGTCTCGCAACAAACCCACGCCTCGACGTTGAATGCAATGCTCTTGTGCTCGTCGAACTTCCCGTCGACAATGAAAACCTACCGCAGATTCCGACAATTCAAGGGTAATATTTTGGTAGCTTGACGCACAAAATGAAAAGAGTTGGAAGAAGAAAAGAAAAAAAAGAGAAGAGAAGACGACAATCGGTGGAGAAGAATGGGGAGAGAGAAAGAAAGTGGTGAAGAAGGAAGGAGATGAAATGATGGTGGGGTCCACTTTTTATTATTATTTTGTTATTTATTATTATTTCCTTTTATTTGTTCATTCTTTCTTTTCTTTATTTAGTTTTTTAGGAAAGAGTAAGTTTTTTAAAAGAAGCAAACTTTGTTTTTCTCCTATATTTTTATGAGTTTTGTTTTATTCCAATTTGAATTTTAAAGTTGAAATTTTCAAATCAATTCCAAATTGATTTTTTTTTCTTTTATTGAAATTTCCAAATCATTTTCATTATGTTTGTAATATGGATGTTCCAAACAAATTTCAAAATGATTTTTACTTTGGTCTTTCCAAATAAATTTCAAAATGACCTTAACATGTTTTTTTCTTCTAAAATGGATCTCAATTTGGGTTTAATTTGAAAATTTTTCAATTCAATTGACCAAATCAATTTCAATCTAGTTTCAAATCTTGAACTTATCGTGGTTCGAAATTTGAATTTCCAAATCAATGTTTATTTGGTTTTAAATTGGAAATTATTTTCAACTTTTGTTAAATTGGAAATAAATAAGTGTCTATTTGGTTTTAAATGGGAAATCAATTTCAATTTTAATTAAATTGGGAATGTCTATGGACTTTAATTAAATTGGAGTTGAATTTCAATTTTGGTTTGCATTAAAATCTCCAAATCAATTTCAATTTGTTTTTGTTGGAATTCTAGTTTCAATTTCAATTTCCTTCCAAAATTAAATTTCAATTTATGATGCCTAATTGGATTTAATTTTAAATTTTAAATTGGATTTCAATATTTGTTTTAATTTGTCTTTTAAATTGAATTTTCCAAGTAAATTTCAAAATAGCTTTAGCGCATTTCCAAGTGATTTCTAATTGGTTTTGAATTAACAACTAAAAAAACATTATTTTTTTCATTGAATGATGTCATATCACTCATAATCATTAATTCACATTTTATTTCTAAAATGTGAAATAATAGATATGGGTCAAAATATTTTGAAAGGCTAAAATAGATCGATTATGAAAATTTTAAAGGTAATTTTGTCTAAGAATGAGTACTTAAGCTGACCGAAAGGGAACACCCTACCTGGAAATTAGCAAAGTTTAACTAGTCAATTATTTTGGCAATCAAAATTTCAATTTGATTTTAAATTAGAATTTCTCGAAATCAATTTCGGTTTGGTCTTAATTTGAAATTTAGTTTGGGATTTCAATTTTTCTTTGTTTTTAATTTGACTTCATTTTGACATTTCCAAATGAATTTCAATTTGTAATTGCGCAAATGAATTTCAATTGGAACTTAATTTGGAATTTCAATTTCATTTTGAAAACTTAAAAAAGTTAAGTTGATTATGAAAATTTTAGGCTAATTTTGTCTAAGAACGAGTATTTAAGCTGACCGAAAGGGAACACCCTGTTTGGAAATTAGCCTAAATATTTTTGCAATCAACTTCAATTTGATTTTAAATTGGATTTCTCAAAACAATTTCAAAATGATTTTTGAACTGAGATTTCCAATTGAATTTCAATTTGGTTGTAGTTCGATTTTTTTAATGATTTAACTTTCTTTCAATTGATTTTAATTTTTAACTTTGAAACTTCTAATTGGATTTAATTTGGAAAAATAAAAATAAAAAAATATATTTTTTTCTCCATTGAATGGTGTCATACCACTCATGATTATTAGTTCACATTTTATTTATGAAATGTGAAATAATAGATATGAGACAAAATAGCTCATGTACAACCTATGACGAAGTTGAGATAATTTCTCAAATTCTTGAGGTGACAAATTTTCTTTAATTATAAGAAAATTCCAACATGACAAACAATTATTGGGTATAACCTCACTCACTACATCAGACCCTTACTTTATCTGTTAAAGCTAAGGTAAGATCAAGTGGGACATTTGTTATTTTATTTTTCTTTCTTCAAAATAATAAGGACCATTTTATGATAAGATAAAAGGGTAATTTAAAAAAAAATGTGGTAACCGTTTTTAAACGGGTGTTGTAGGGGTGCTAACACCTTCCCTACACTCAATCGACTCCCGAGCCTAATTTTTGGTTTTCAAAGACCGGTTTTTCTTTAAAATGGGTGACCAATCACACCCCAAGATGATTGGTGGCGACTCCAAACCTTTAACCTCGAAAGAGACCCTTAGGGAAGGACGTCGGCCGCTCCGCGTTGCGATGTCGTTGCGACACCTAGCACACAAGCTCCGTGACCACCATAAAACCCAGATTTTTGTTGTTTTGATAGATAGTTGGTGAAAAGGCTTATGGTGTATTGTAAAAATACGAAGCTAAAGCTACAACGGTTAGAGGCAGGCAAACAAGTTTCTAAGGAAGATAATTTCCTTAAAAATTTGAGGAGCAATTTGAAAATGAGATGAAAAAATAGAAGTGGTGTTGATAGTATATGATGATGGTGTGGCGAAAAGAGATACATTAGAAATAATTGGTAAATTAATTAAGAAGCTGAAAAATGACCATCATAGTGGTTTGAATTGGAATTGGTTTGTTGGAGATGCGTGGTTACGGTGGTGGGGGAGGTAAATTCCATGAAGATGTTGCTGGAAAAGAATGAGCCAGTGGAGGAGAGGAAATAATTTGATGAGCCTTAAAATAAGGGTAAAACAGGAACAAAAAGTCTGGATCTTAATAAATTGCCATATTTGCAAATCTTTTCTAAATGTGTTATAATTGCAAATAGGAAAACTAAAATAGTCACCCTTGCAATTTCTCAATTATTAATGGCACTACCCACCAACCAAATTATTATTATTATTATTAATTAAAAGGCTATTAAATTTCATCAAGCTTTAGAGTCGGGCCTGTTCGTTTCCTCCGCCATCTTTTCGAGCTTCGCGTGCATTGATTCAAGTGCATGCAATCTTAATTCTCTTGCGACGCTCAGAGTGCTTTTTGCTTAGCCATGTTTGCAACCATTTCTAGCCTTACAATACGAAGTTTCTCGGTTTACATTTGAATGTCGAACAACATGAAGAAGAATATGGATCGAATCAGCCTTCTGCCAAATTCTCTTCTTCATCGCATTCTCTCCTTCTTAAACACAAAACAAGTTGTCCAAACTTGCATTCTCTCAAAACGGTGGAAGCCCGTTTGGATTCATATTCCCACACTCATCTTTGATTTCAACTCCTACCCATTTAAAGGGTCCACTGAAAATTCTTCTTCGAAAGAAAGTTCGTTTAAAAACTTCATCTTTAGAGTTCTTTCTGAACACTACGGTGGAGAGATTAAAAAATTGTGTTACTCTTCCTCCCCAAATGAGGATGAAGACATTCTAGCAGAATTATTGATATGCTATGCACGATGCCACAATGTTCGAGAACTTTGCATCGATATCTATTATATTGATCCAAGTGATAATTGGAAATATTGCTTTTTAGGATTTTCATCGCTCACTGTGTTGAAAGTGATTTGTAAACAAGAGGATTATTGGGGAGCCTTGCAATTACCATTATTGACAACTTTTGAGATTGAATCTGCATGTGATGAGGACTATTTTTTTTTAGTTGACAAAAGAATTGAGTTGTTCTCGGGCTGTCCAAATTTAAGATCGTTGGTTCTAATTGATTATTTTGTTGAAGGTATTGCTTGTATTTGTGCTCCAAAACTTGAGTATTTGGAATTTTCTGCTTCTTCTCTCTGGGAATTAACTTCACATAAAGTTGAGTTGTATACACCAAGTCTCAAAAGTGTCAAGCTTCGCAATCTTTTACCAACCGTGAAGTCTGATTCGGAATTTTCTTTCATACAAGAAGTGTATATAGAAGTTGACGACTTTGCCTTCAGCAAAAAGGGTTCAGCCTTCCAAAAGTTGGAGACAAATTTTTTTCAGTTGCTTAAACTGTTTCATAATGCAAGGTCTTTCACACTACCTTTGAAGGCAATAGAGGTATCTAGCTATAACTTCTTTTTTCTCCTTGGGACATTTTTTTTTTTCTAATCTCTAGTTTAACGTTGTACTTTTGTTTGTGTACTAGACCATCTTGTCTGTTCCTTGGAGAAGGTTATTTTTACTGAACTTGACACATTTGAAGTTAAAAACAAATGGAACCAACAAGTTGATAGACTTGCCAATTGGTGCATTGGCGAATTTACTTAAATGCCCCAATTTAGAAACGTTGGCGGTTCTCAATGAGGTAACCATGTCTAATATTTTCCTATATATGAAAGAAAGCTAACTAAATAGCAAATTTCAGTGTTTGTGTATTAATGTTATAATATTCACCTGGATTTATATTTACAGGCCAACAAGAACAGAACTTTATGGGGTTTTGATTGTTGCTGATGTTGCTGAAATGGTTGTGATCTGA

mRNA sequence

ATGCCGACGAGCTACAGTCGCATCCTAATCGCTCGCAGCCACCTCGAACCCACAGTCTCGCAACAAACCCACGCCTCGACGTTGAATGCAATGCTCTTGTGCTCGTCGAACTTCCCGTCGACAATGAAAACCTACCGCAGATTCCGACAATTCAAGGGTATTGCTTGTATTTGTGCTCCAAAACTTGAGTATTTGGAATTTTCTGCTTCTTCTCTCTGGGAATTAACTTCACATAAAGTTGAGTTGTATACACCAAGTCTCAAAAGTGTCAAGCTTCGCAATCTTTTACCAACCGTGAAGTCTGATTCGGAATTTTCTTTCATACAAGAAGTGTATATAGAAGTTGACGACTTTGCCTTCAGCAAAAAGGGTTCAGCCTTCCAAAAGTTGGAGACAAATTTTTTTCAGTTGCTTAAACTGTTTCATAATGCAAGGTCTTTCACACTACCTTTGAAGGCAATAGAGACCATCTTGTCTGTTCCTTGGAGAAGGTTATTTTTACTGAACTTGACACATTTGAAGTTAAAAACAAATGGAACCAACAAGTTGATAGACTTGCCAATTGGTGCATTGGCGAATTTACTTAAATGCCCCAATTTAGAAACGTTGGCGGTTCTCAATGAGGTAACCATGCCAACAAGAACAGAACTTTATGGGGTTTTGATTGTTGCTGATGTTGCTGAAATGGTTGTGATCTGA

Coding sequence (CDS)

ATGCCGACGAGCTACAGTCGCATCCTAATCGCTCGCAGCCACCTCGAACCCACAGTCTCGCAACAAACCCACGCCTCGACGTTGAATGCAATGCTCTTGTGCTCGTCGAACTTCCCGTCGACAATGAAAACCTACCGCAGATTCCGACAATTCAAGGGTATTGCTTGTATTTGTGCTCCAAAACTTGAGTATTTGGAATTTTCTGCTTCTTCTCTCTGGGAATTAACTTCACATAAAGTTGAGTTGTATACACCAAGTCTCAAAAGTGTCAAGCTTCGCAATCTTTTACCAACCGTGAAGTCTGATTCGGAATTTTCTTTCATACAAGAAGTGTATATAGAAGTTGACGACTTTGCCTTCAGCAAAAAGGGTTCAGCCTTCCAAAAGTTGGAGACAAATTTTTTTCAGTTGCTTAAACTGTTTCATAATGCAAGGTCTTTCACACTACCTTTGAAGGCAATAGAGACCATCTTGTCTGTTCCTTGGAGAAGGTTATTTTTACTGAACTTGACACATTTGAAGTTAAAAACAAATGGAACCAACAAGTTGATAGACTTGCCAATTGGTGCATTGGCGAATTTACTTAAATGCCCCAATTTAGAAACGTTGGCGGTTCTCAATGAGGTAACCATGCCAACAAGAACAGAACTTTATGGGGTTTTGATTGTTGCTGATGTTGCTGAAATGGTTGTGATCTGA

Protein sequence

MPTSYSRILIARSHLEPTVSQQTHASTLNAMLLCSSNFPSTMKTYRRFRQFKGIACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEVTMPTRTELYGVLIVADVAEMVVI
Homology
[Close]
BLAST of Spg020924 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-26
Identity = 80/156 (51.28%), Postives = 102/156 (65.38%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I APKLE LE  + S + LT  +VEL+TP LKSV   N+LP +KSDSEF  I +V I+
Sbjct: 552 ATISAPKLENLELCSFSDFGLTFPEVELFTPILKSVNFINVLPILKSDSEFLCIHKVNIQ 611

Query: 115 VDDFAFSKK--GSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTH 174
           ++D  F ++  G   QK  +NF +LL++FHNARSFTLPLKA + +LS  +  L   N+ H
Sbjct: 612 LEDSVFEREYSGPNKQKFNSNFGELLRVFHNARSFTLPLKATQVVLSNYFNGLSFHNIRH 671

Query: 175 LKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE 209
           L+LKTN T  L         +LLK PNLET AVLNE
Sbjct: 672 LRLKTNDTGIL-------FKHLLKAPNLETFAVLNE 700

[Close]
BLAST of Spg020924 vs. NCBI nr
Match: XP_038890214.1 (F-box/LRR-repeat protein At3g26922-like [Benincasa hispida])

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-25
Identity = 76/152 (50.00%), Postives = 103/152 (67.76%), Query Frame = 0 

Query: 57  ICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIEVD 116
           I APKL+ L+  AS   ELT  +VEL+TP+L++V   N+LP VKSDSEFS I +V I++ 
Sbjct: 210 ISAPKLKNLKLCASPRMELTFPEVELFTPTLETVNFINVLPIVKSDSEFSCIHKVDIQLK 269

Query: 117 DFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLKLK 176
           D  F + GS  QKL++NF +LL +FHNARSFTLPLKA  T++   +  LF  N++HL+LK
Sbjct: 270 DSIFERVGSQTQKLKSNFRELLSVFHNARSFTLPLKA--TLVISLYDELFFHNMSHLRLK 329

Query: 177 TNGTNKLIDLPIGALANLLKCPNLETLAVLNE 209
           T  +  L++       +LLK P L+T  VLNE
Sbjct: 330 TKESGLLLE-------HLLKAPKLKTFVVLNE 352

[Close]
BLAST of Spg020924 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-23
Identity = 73/154 (47.40%), Postives = 99/154 (64.29%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I+
Sbjct: 218 ATISAPRLENFKLCASHDMELTFPQVELLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQ 277

Query: 115 VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLK 174
           + D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA + I S  ++ L   N+ HL+
Sbjct: 278 LKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQVISS--YKELSFHNMRHLR 337

Query: 175 LKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE 209
           LKT  ++ L       L +LLK P LET+ VLNE
Sbjct: 338 LKTKESDLL-------LKHLLKAPKLETIVVLNE 362

[Close]
BLAST of Spg020924 vs. NCBI nr
Match: KAA0039267.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-16
Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I+
Sbjct: 218 ATISAPRLENFKLCASHDMELTFPQVELLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQ 277

Query: 115 VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETIL 159
           + D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA + +L
Sbjct: 278 LKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQEVL 321

[Close]
BLAST of Spg020924 vs. NCBI nr
Match: KAE8649006.1 (hypothetical protein Csa_008454 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-14
Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I APKL+ L+  AS   + T  +V+L TP+L+++   N+LPTVKSD EFS I +V I+
Sbjct: 219 ATISAPKLKNLKLCASPDNDPTFSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQ 278

Query: 115 -VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVP-WRRLFLLNLTH 174
            V  F    + S     ++ F +LL +FH ARSFTLPLK    ++S+  +  L   N+ H
Sbjct: 279 LVSRFERDDRNSR----KSKFRELLSVFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKH 338

Query: 175 LKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEV 210
           L+L+T  T  L++        LLK PNLE    + EV
Sbjct: 339 LRLRTKETGLLLE-------QLLKAPNLENFRFVKEV 364

[Close]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 73/154 (47.40%), Postives = 99/154 (64.29%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I+
Sbjct: 218 ATISAPRLENFKLCASHDMELTFPQVELLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQ 277

Query: 115 VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVPWRRLFLLNLTHLK 174
           + D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA + I S  ++ L   N+ HL+
Sbjct: 278 LKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQVISS--YKELSFHNMRHLR 337

Query: 175 LKTNGTNKLIDLPIGALANLLKCPNLETLAVLNE 209
           LKT  ++ L       L +LLK P LET+ VLNE
Sbjct: 338 LKTKESDLL-------LKHLLKAPKLETIVVLNE 362

[Close]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-16
Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I AP+LE  +  AS   ELT  +VEL TP+LK+V   N+LP ++SDSEFS IQ+V I+
Sbjct: 218 ATISAPRLENFKLCASHDMELTFPQVELLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQ 277

Query: 115 VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETIL 159
           + D  F+  GS  Q+L++ F  LL + HNA SFTLP+KA + +L
Sbjct: 278 LKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQEVL 321

[Close]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match: A0A0A0KSW6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.4e-14
Identity = 63/159 (39.62%), Postives = 91/159 (57.23%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVELYTPSLKSVKLRNLLPTVKSDSEFSFIQEVYIE 114
           A I APKL+ L+  AS   + T  +V+L TP+L+++   N+LPTVKSD EFS I +V I+
Sbjct: 219 ATISAPKLKNLKLCASPDNDPTFSEVQLLTPTLENISFVNVLPTVKSDYEFSRIDKVDIQ 278

Query: 115 -VDDFAFSKKGSAFQKLETNFFQLLKLFHNARSFTLPLKAIETILSVP-WRRLFLLNLTH 174
            V  F    + S     ++ F +LL +FH ARSFTLPLK    ++S+  +  L   N+ H
Sbjct: 279 LVSRFERDDRNSR----KSKFRELLSVFHMARSFTLPLKLTMQVMSLDNFDALCFHNMKH 338

Query: 175 LKLKTNGTNKLIDLPIGALANLLKCPNLETLAVLNEVTM 212
           L+L+T  T  L++        LLK PNLE    + E  +
Sbjct: 339 LRLRTKETGLLLE-------QLLKAPNLENFRFVKEANV 366

[Close]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match: A0A1S3CBU6 (F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11
Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 0 

Query: 86  SLKSVKLRNLLPTVKSDSEFSFIQEVYIEVDDFAFSKKGSAFQKLETNFFQLLKLFHNAR 145
           ++ + +L N       D E +F Q+V I++ D  F+  GS  Q+L++ F  LL + HNA 
Sbjct: 219 TISAPRLENFKLCASHDMELTFPQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNAS 278

Query: 146 SFTLPLKAIETILSVPWRRLFLLNLTHLKLKTNGTNKLIDLPIGALANLLKCPNLETLAV 205
           SFTLP+KA + I S  ++ L   N+ HL+LKT  ++ L       L +LLK P LET+ V
Sbjct: 279 SFTLPMKATQVISS--YKELSFHNMRHLRLKTKESDLL-------LKHLLKAPKLETIVV 332

Query: 206 LNE 209
           LNE
Sbjct: 339 LNE 332

[Close]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-09
Identity = 49/99 (49.49%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 55  ACICAPKLEYLEFSASSLWELTSHKVEL-YTPSLKSVKLRNLLPTVKSDSEFSFIQEVYI 114
           A ICAPKLE L   + +  EL   +VEL  T SL++V   N+LPTV S  EFS IQ+V I
Sbjct: 316 ATICAPKLENLVLCSGN--ELVFSEVELTCTSSLRNVTFSNMLPTVNSALEFSCIQKVNI 375

Query: 115 EVDDFAFSKKGSAF-QKLETNFFQLLKLFHNARSFTLPL 152
           EV ++ FS     F Q     F +L ++FHNARSF LPL
Sbjct: 376 EVHNYQFSSGNGYFCQNKIAAFSELFRVFHNARSFILPL 412

The following BLAST results are available for this feature:
BLAST of Spg020924 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890213.12.3e-2651.28uncharacterized protein LOC120079853 [Benincasa hispida][more]
XP_038890214.11.2e-2550.00F-box/LRR-repeat protein At3g26922-like [Benincasa hispida][more]
XP_008459617.13.2e-2347.40PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo][more]
KAA0039267.14.9e-1650.00F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat... [more]
KAE8649006.14.6e-1440.76hypothetical protein Csa_008454 [Cucumis sativus][more]
BLAST of Spg020924 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg020924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CB411.5e-2347.40F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7TCF12.4e-1650.00F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0KSW66.4e-1439.62F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 ... [more]
A0A1S3CBU61.8e-1139.84F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1CKA91.6e-0949.49LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica ch... [more]
BLAST of Spg020924 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020924.1Spg020924.1mRNA