Spg020024 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020024
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Girdin-like
Location	scaffold1: 26712968 .. 26719316 (-)
RNA-Seq Expression	Spg020024
Synteny	Spg020024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTTGGTGTAGCAGTTTGGGATCCAACATACCCAAAGAAGGAAGCATGGATGTCTTTCTTTACAACAATTAAGTCTGAAAATATTATATGGAAGGCTCCATGGATGCCCTTAAAGGCCATGACATATAGATGTGGAGATTTCTATAGTGTGCCTTTGTTAGGGCCATGGGAGGGCATTAATTATGCAACTTTGTTAGTTTTACGGCAGATGTGGTTTAAGCAGTTTATACCGGTTACTCACAATCTACAAGAATTAGAGTTTTCTTATAATCTCGAGGACTTCAGTGAGAAAAAATGTCAGACGGTCAATGCATTTAAATCTGTGAGGAAGGTGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGTGAATATGAAGTTTGGCAAATGAATAGAAGGAAGAGCATAACAAAGTTTATCCCAAAGGAGAAAGATGAGAAGCCAGAAGAGCCAGCACACGATCAGTTGAGTCAGTGGAGTGAAGAATGCAGGAGAATGGAAGAAAGAAATCAGTTATTAGAACAAGAGAATGAGAAGCTACGTAAAGAGACAACTCAATGGATGAATCATGCAACTCAAATACAAAAAGAAATTAATAAGACTAAAGGGTTATTGGAGAACCATAATGAGCTAGAGAATGGTTACAAAGCTTTAGGCAAGGAGATGAGGTAGATGAATAAAGAAAATCGAAGTTTGAAAAATGAAAGAGCGACATTACGAGAAGCATTGAAATCTTGAGAGGACTACATCAAAGATTTAGAAAATGGGAAGAGTTTGCTTGTGCAATTCATCAATGAATTGAATACATCGATTAGTACAAAAAACACACAAATAACAGGATTAGAGACGAATAATCATTCTTTCCGGGAAACTATCGACAATTTACAAGCGAGAATGGTCGAGCACTCAGAAGAATATGGAACTGTAAACCCGAGACTTTCCCTTAGATAATTTTCTCTTATCATCTATTGTGGCTTCATGGTTGAATCTAAGTTGTTGGAAATTATACACTTAAAAAGAAAGGAGATGGGAAAGAAGAAAAGAAAATAAATGGAAAAGGAAAAGGAAAAGGAAAAAGGAAAAAAAAAAAGAAAAGAAATGAAGTGGGAATGGACAGCAAGAAGGGCACCACCGACTAGCATTCTTATCAGCCCATTATCAGCCTCATTTCTCATCCTTTTCCACTAAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGATGTGAGGTTTAATTTTCTTGAAAGTTAGTTCATTTTCTAACAAATTTCATGAAGGAAGCTTGACCTAAATCGTATGAGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTATGGGGTGTACAAGTTTAATCGGAAGCTCTATTTGGTATGGTTGGAAAACTTATTCAATTATCTACAACTTTCATGAAGAATGCGTGAGCCAAAAATGGCTTGAAGTAGGTTTACTTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGAATTTCTGGATAAATTGGATGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGTATTTCATTACTTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCGAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTCCTATGAATGATACATGATTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTCTAAATGATTTTCGGTTTTCCACGAGCAAGCTGAGTAAGCTTAAGTTTTATGAAAGATAATGATAAGCAGGCATGTTTTAATGTTTTCAAGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCATGAGTGTTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAGAACGTTTGATATACTTGATATGCCTTGCTAGATTCTTAATGACGGACTTGCGAAATGTTTTAGAAGGCCTTTATCCTTACACGTTTATGTTAAACGCTTTGACTGAGCATATTTATACGTTTAAAGGTTTTTCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATATACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCATAGAGGTCGTGGACGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGGAACACTAAGAAATTATGCTGAGTCTTTACACCACTAGCTCACCGTACACCAAAATTCAAGTGAGAGAATATTGCAGAAGTATCAGCAGTTAAAGGCAAATTACAAAGAAATGAAGAATGATTATGATCTACAAGGAAGAAATTTTCATATGATTTTAGGGCGTGTGGATCAAACCATTGAAATTCTTAGATTCGTTGCTAGAAGGGCTAATGGCTTTGTAGAATGGGCAGCTGAACTAAGAGTCAATATTTCTCCTAGGCAACCTAACGCAGATGACTTGAATAGGTTTCTAAGGATGATATGCAAAGAACTTGGGCATCTTAGCTGTTTTCATTAATTGTTCTTTTTTGTTGAATTTTGCATTTATGACAATAAAAATAATGTACATTGCACTTTCTCTTTGTAGTGTACCCTTTAGTTAAGAATTAGTTTATTTTTATTTTCTCTATTTTTATTTATTTATATTATTAATTATTACTATTTTTTGTTTATTCATTATTTTTTCTCCTCTTTCTCTAAAAAGGAATAAAAATAGCTCGCAACATTCCAATTCACCATCCCTACAATACAAGATCTAAAAGATGAATCATGGAAGAACAAGGCAAGGATATGGATAAAATGAAATAAGAGATCAATAATCTTAGTGAACAAGTAGCGAAAATTCTAAAATTACTATCAACTGGGAAAGGAAAAGGGGTTGTAGAAGCAGCACAGGCAAGCAATCCAATCCAGGAAATTGACGATCCTGCTTATCCACCAGGATTTACTCCTCAACATGTATGACAACGCATGCATTTTCCACAGTCATAAACCCCCCCACAATATGATGCTACGAATCCACTCTACACTCCTATCCCAGATATGGAACAATTGGAAGCTCAAGCTCGAATTCAAATCAATAATATGACAATGTCTGATCAACAATTGGAGACGAGACAACATGAGGGCATTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTACGAGCAATTGAAGGGACAAATGTTTATGGAAATATTGATGCCACACAATTGTGTTTAGTGCCAGGTTTGACAGTTCCAGCAAAATTTAAAGTCCTAGAGTTTGATAAATATGATGGATCATCATGTCCTAGGAGTCATCTCATAATGTACTGCAGAAAAATGGCCGCACACATCAATAATGACAAATTATTGATCATTGCTTTCAAGATAGTTTAACTGGGCCAGCCACTCGATGGTATATACAGTTAGACAATACACACATTCATGTTTGGAAGGACTTAGCGGACGCATTTTTAAAGCAGTATGGCATAATATTGACATGGCACCAGATCGCCTTGACTTGCAGAGGAAGCAGAAAAGAACTTCAGAAAGTTTCAAGGAATATGCCCAGAGGTGGAGGGATATGGCTGTTGAGGTTCAACCACCACTAACAGATAAGGAAATGACGACTATGTTTATGCACACTTTGCAATCTCCCTTTTATGATCACATGATTGGTAATGCAGCAACCAACTTCTCTGACATCATTGTTATTGGTGAAAAAATTGAATATGGAATTAAGCATGGAAGGATAGCAGACGCTGCAGCTGAATCGACTATGGGAAAGAAAGGAGCAACATCAAAGAAGAAGGAAGGGAAGGTTCAAGCAATTAGCTTTACAAACTCTTGGAAAAACAAACCAAAGTTTGGTAAAAGAGAATACGAGCAAAAGTACATGAACAATGTCTCTGATGCTCCCTACAATAATTACGTGTCAAGTCATACATTTTCTGGAGCTACAAAGCCAACAAATGCACATTTTCCACAGCAAAATGCGCATTCAACTAGATCGTTTGTGCAAGGTCAAAATAGTAGGGTCAACCAAAACTCGTGGCATTATGATCCGATTCCCATGACTTATACAGAGCTTCTACCTCAGCTAATTCAGAATCAACAGTTGGCTCTTATCCCAATGGATCCTGTACAACCTCCTTATCCAAAGTGGTATGATCCAAATGCTCGCTGTGACTATCATGCTGGAGGAATCGGAAAGTCAACAGAGAATTGTTTCGCTTTGAAAAAAAAGGTGCAAACTTTAATCAATGCTGGATGGTTAAACTTTAAGAAAGCTGGGGAAAATCCATATATCAACAATAACCTATTACCTAATCATGAGAACCCAAAAGTGAATGGTGTAGATTATCTCTCTGAAGTGTGTAAAGAGGAAGTTTATGAGATTACAACGCCTATATGGAGGTACTTTTCGAGGCTTTTTTCGATGCGGAATATGTCAATCAAGAGTACTTAGACCCTACAGTAAGATATGAAGGGTATGATGAAGAAAAGCATTGTATATTCCATCTAGGAATTGTTGGACATACTATTCAATATTGTGACAAGTTCAGATCCAAAGTACAGCAACTTATGGATTCAAAGATACTCATGATATGTAGAAGAGCAAGCGAAATGAGGGAAGACGAAGTCAACGCATTAACAGAGGAATCTTCTTCCCACGAAAAGGAAGTAATTGAGTCCTTCCCACCAAAGCCTTTGACTATCATATACCAAGAGAATCATAACGATTCATTTCTTCAAAATCCTCGACCTATCACAATTCAAGTGCCTGGTCCTTTCAAGTTTAAGGACATGAAAGAAGTACCATGGAGATATGAGTGTCAAACTCTTACAAATCCATCAATTGACAACATTACAGGAGTTAGTGGAATAACTCAGAGTGGTAGGTGTTAGACACCAGAAAATCTATTGAAACCATCAAGTGGTTTGATACTAGGGCAAACGAGGAAAAATGATAAAAAGATTATGTCTGAGCATGGCAAAGGACGAGATATAGAAGAGTCTATCGTAGCTAAAGATATGGAATACAAGAAGCCTGTTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTGTTTTGTGTGTCATTTGTGTTAAAAAGGGTTGCTTTTAGATGAATATTATATGTTTTAACCCATTTGGAAGAATGGAGGCTTTGGAAGTTATTTTGTGCAGAAAATATTGCTGAGCAAATTGAAGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAATTGCCATGTAACAGCTCGTTATCCATTTTAA

mRNA sequence

GAGTTTGGTGTAGCAGTTTGGGATCCAACATACCCAAAGAAGGAAGCATGGATGTCTTTCTTTACAACAATTAAGTCTGAAAATATTATATGGAAGGCTCCATGGATGCCCTTAAAGGCCATGACATATAGATGTGGAGATTTCTATAGTGTGCCTTTGTTAGGGCCATGGGAGGGCATTAATTATGCAACTTTGTTAGTTTTACGGCAGATGTGGTTTAAGCAGTTTATACCGGTTACTCACAATCTACAAGAATTAGAGTTTTCTTATAATCTCGAGGACTTCAGTGAGAAAAAATGTCAGACGGTCAATGCATTTAAATCTGTGAGGAAGGTGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGTGAATATGAAGTTTGGCAAATGAATAGAAGGAAGAGCATAACAAAGTTTATCCCAAAGGAGAAAGATGAGAAGCCAGAAGAGCCAGCACACGATCAGTTGAGTCAGTGGAGTGAAGAATGCAGGAGAATGGAAGAAAGAAATCAGTTATTAGAACAAGAGAATGAGAAGCTACGTAAAGAGACAACTCAATGGATGAATCATGCAACTCAAATACAAAAAGAAATTAATAAGACTAAAGGGTTATTGGAGAACCATAATGAGCTAGAGAATGGTTACAAAGCTTTAGGCAAGGAGATGAGGCCGAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATATACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGAAAAGGGGTTGTAGAAGCAGCACAGGCAAGCAATCCAATCCAGGAAATTGACGATCCTGCTTATCCACCAGGATTTACTCCTCAACATGTACTTTTCGAGGCTTTTTTCGATGCGGAATATGTCAATCAAGAGTACTTAGACCCTACAGTAAGATATGAAGGGTATGATGAAGAAAAGCATTGTATATTCCATCTAGGAATTGTTGGACATACTATTCAATATTGTGACAAGTTCAGATCCAAAGTACAGCAACTTATGGATTCAAAGATACTCATGATATGTAGAAGAGCAAGCGAAATGAGGGAAGACGAAGTCAACGCATTAACAGAGGAATCTTCTTCCCACGAAAAGGAAGTAATTGAGTCCTTCCCACCAAAGCCTTTGACTATCATATACCAAGAGAATCATAACGATTCATTTCTTCAAAATCCTCGACCTATCACAATTCAAGTGCCTGGTCCTTTCAAGTTTAAGGACATGAAAGAAGTACCATGGAGATATGAGTGTCAAACTCTTACAAATCCATCAATTGACAACATTACAGGAGTTAGTGGAATAACTCAGAGTGAAAATATTGCTGAGCAAATTGAAGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAATTGCCATGTAACAGCTCGTTATCCATTTTAA

Coding sequence (CDS)

GAGTTTGGTGTAGCAGTTTGGGATCCAACATACCCAAAGAAGGAAGCATGGATGTCTTTCTTTACAACAATTAAGTCTGAAAATATTATATGGAAGGCTCCATGGATGCCCTTAAAGGCCATGACATATAGATGTGGAGATTTCTATAGTGTGCCTTTGTTAGGGCCATGGGAGGGCATTAATTATGCAACTTTGTTAGTTTTACGGCAGATGTGGTTTAAGCAGTTTATACCGGTTACTCACAATCTACAAGAATTAGAGTTTTCTTATAATCTCGAGGACTTCAGTGAGAAAAAATGTCAGACGGTCAATGCATTTAAATCTGTGAGGAAGGTGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGTGAATATGAAGTTTGGCAAATGAATAGAAGGAAGAGCATAACAAAGTTTATCCCAAAGGAGAAAGATGAGAAGCCAGAAGAGCCAGCACACGATCAGTTGAGTCAGTGGAGTGAAGAATGCAGGAGAATGGAAGAAAGAAATCAGTTATTAGAACAAGAGAATGAGAAGCTACGTAAAGAGACAACTCAATGGATGAATCATGCAACTCAAATACAAAAAGAAATTAATAAGACTAAAGGGTTATTGGAGAACCATAATGAGCTAGAGAATGGTTACAAAGCTTTAGGCAAGGAGATGAGGCCGAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATATACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGAAAAGGGGTTGTAGAAGCAGCACAGGCAAGCAATCCAATCCAGGAAATTGACGATCCTGCTTATCCACCAGGATTTACTCCTCAACATGTACTTTTCGAGGCTTTTTTCGATGCGGAATATGTCAATCAAGAGTACTTAGACCCTACAGTAAGATATGAAGGGTATGATGAAGAAAAGCATTGTATATTCCATCTAGGAATTGTTGGACATACTATTCAATATTGTGACAAGTTCAGATCCAAAGTACAGCAACTTATGGATTCAAAGATACTCATGATATGTAGAAGAGCAAGCGAAATGAGGGAAGACGAAGTCAACGCATTAACAGAGGAATCTTCTTCCCACGAAAAGGAAGTAATTGAGTCCTTCCCACCAAAGCCTTTGACTATCATATACCAAGAGAATCATAACGATTCATTTCTTCAAAATCCTCGACCTATCACAATTCAAGTGCCTGGTCCTTTCAAGTTTAAGGACATGAAAGAAGTACCATGGAGATATGAGTGTCAAACTCTTACAAATCCATCAATTGACAACATTACAGGAGTTAGTGGAATAACTCAGAGTGAAAATATTGCTGAGCAAATTGAAGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAATTGCCATGTAACAGCTCGTTATCCATTTTAA

Protein sequence

EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGINYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEGVTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKLRKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMRPRGNRSSLQTGELDKTVEIELPVPDILPTSAESSRSSSSYFPNQVMSGLHHVYVERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGKGVVEAAQASNPIQEIDDPAYPPGFTPQHVLFEAFFDAEYVNQEYLDPTVRYEGYDEEKHCIFHLGIVGHTIQYCDKFRSKVQQLMDSKILMICRRASEMREDEVNALTEESSSHEKEVIESFPPKPLTIIYQENHNDSFLQNPRPITIQVPGPFKFKDMKEVPWRYECQTLTNPSIDNITGVSGITQSENIAEQIEGAKSVIQQSREQNCHVTARYPF

Homology

[Close]

BLAST of Spg020024 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-73
Identity = 143/231 (61.90%), Postives = 178/231 (77.06%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVWDPTYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 263 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 322

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EG
Sbjct: 323 NYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEG 382

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK+I   I +E  E  +E + +Q +QW E+   +EE+N+LLEQENEKL
Sbjct: 383 VTSGYEAWQANRRKNIID-ISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKL 442

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           RKET+QWM+HAT +Q E+ KTK  L+N ++LE   + L +EMR   + NRS
Sbjct: 443 RKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRS 492

[Close]

BLAST of Spg020024 vs. NCBI nr
Match: XP_031740432.1 (uncharacterized protein LOC116403430 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-73
Identity = 139/230 (60.43%), Postives = 183/230 (79.57%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVW+PTYPKKE W+SFF+T+ SE++IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 112 EFGMAVWNPTYPKKETWVSFFSTLSSEDVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 171

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQ+ +F+Y+ ED   KK + V A+KSVRK+K KGH+EG
Sbjct: 172 NYTPLLVLRQVWLKQFIPPTHNLQDSDFAYDHEDCQRKKHRAVCAWKSVRKIKDKGHYEG 231

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK++  +  +E  E+ EEP+ +Q  QW E+  ++EE+N+LLEQENEKL
Sbjct: 232 VTSGYEAWQTNRRKNVI-YTLREVVERVEEPSSEQPDQWVEKITKLEEKNRLLEQENEKL 291

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMRPRGNRSS 231
           +KET+QW++HAT +QKE+ KTK  L+N ++LE   + L +EMR R N+S+
Sbjct: 292 QKETSQWIDHATFLQKELEKTKSFLKNQDKLEKNLEVLDEEMR-RMNKSN 339

[Close]

BLAST of Spg020024 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 4.5e-73
Identity = 143/231 (61.90%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVWD TYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 107 EFGMAVWDQTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 166

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EG
Sbjct: 167 NYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEG 226

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK+I   I +E  E+ +E + +Q +QW E+   +EE+N+LLEQENEKL
Sbjct: 227 VTSGYEAWQANRRKNIID-ISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKL 286

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           RKET+QWM+HAT +Q E+ KTK  L+N + LE   + L KEMR   + NRS
Sbjct: 287 RKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRS 336

[Close]

BLAST of Spg020024 vs. NCBI nr
Match: XP_031739496.1 (uncharacterized protein LOC116403043 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 4.9e-72
Identity = 134/222 (60.36%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVW+PTYPKKE W+SFF+T+ SE++IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 113 EFGMAVWNPTYPKKETWVSFFSTLSSEDVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 172

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQ+ +F+Y+ ED   KK + V A+KSVRK+K KGH+EG
Sbjct: 173 NYTPLLVLRQVWLKQFIPPTHNLQDSDFAYDHEDCQRKKHRAVCAWKSVRKIKDKGHYEG 232

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK++  +  K+  E+ EE + +Q  QW E+  ++EE+N+LLEQENEKL
Sbjct: 233 VTSGYEAWQTNRRKNVI-YTLKDVVERVEETSSEQPDQWVEKITKLEEKNRLLEQENEKL 292

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEM 223
           +KET+QW++HAT +QKE+ KTK  L+N ++LE   + L +EM
Sbjct: 293 QKETSQWIDHATFLQKELEKTKSFLKNQDKLEKNLEVLDEEM 333

[Close]

BLAST of Spg020024 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 4.2e-71
Identity = 140/228 (61.40%), Postives = 174/228 (76.32%), Query Frame = 0


Query: 4   VAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGINYA 63
           +AVWD TYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+NY 
Sbjct: 1   MAVWDQTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYT 60

Query: 64  TLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEGVTG 123
            LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EGVT 
Sbjct: 61  PLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTS 120

Query: 124 EYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKLRKE 183
            YE WQ NRRK+I   I +E  E+ +E + +Q +QW E+   +EE+N+LLEQENEKLRKE
Sbjct: 121 GYEAWQANRRKNIID-ISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKE 180

Query: 184 TTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           T+QWM+HAT +Q E+ KTK  L+N + LE   + L KEMR   + NRS
Sbjct: 181 TSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRS 227

[Close]

BLAST of Spg020024 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.7e-74
Identity = 143/231 (61.90%), Postives = 178/231 (77.06%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVWDPTYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 263 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 322

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EG
Sbjct: 323 NYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEG 382

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK+I   I +E  E  +E + +Q +QW E+   +EE+N+LLEQENEKL
Sbjct: 383 VTSGYEAWQANRRKNIID-ISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKL 442

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           RKET+QWM+HAT +Q E+ KTK  L+N ++LE   + L +EMR   + NRS
Sbjct: 443 RKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRS 492

[Close]

BLAST of Spg020024 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.2e-73
Identity = 143/231 (61.90%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVWD TYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 107 EFGMAVWDQTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 166

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EG
Sbjct: 167 NYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEG 226

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK+I   I +E  E+ +E + +Q +QW E+   +EE+N+LLEQENEKL
Sbjct: 227 VTSGYEAWQANRRKNIID-ISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKL 286

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           RKET+QWM+HAT +Q E+ KTK  L+N + LE   + L KEMR   + NRS
Sbjct: 287 RKETSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRS 336

[Close]

BLAST of Spg020024 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.0e-71
Identity = 140/228 (61.40%), Postives = 174/228 (76.32%), Query Frame = 0


Query: 4   VAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGINYA 63
           +AVWD TYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+NY 
Sbjct: 1   MAVWDQTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYT 60

Query: 64  TLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEGVTG 123
            LLVLRQ+W KQFIP THNLQE +FSY+ ED   KK Q V A+KS+RK+K KGH+EGVT 
Sbjct: 61  PLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTS 120

Query: 124 EYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKLRKE 183
            YE WQ NRRK+I   I +E  E+ +E + +Q +QW E+   +EE+N+LLEQENEKLRKE
Sbjct: 121 GYEAWQANRRKNIID-ISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKE 180

Query: 184 TTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS 230
           T+QWM+HAT +Q E+ KTK  L+N + LE   + L KEMR   + NRS
Sbjct: 181 TSQWMDHATYLQNELEKTKSFLKNQDVLEKDLETLDKEMRRMNKANRS 227

[Close]

BLAST of Spg020024 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-67
Identity = 138/263 (52.47%), Postives = 183/263 (69.58%), Query Frame = 0


Query: 10  TYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGINYATLLVLR 69
           +YP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+NY  LLVLR
Sbjct: 49  SYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLR 108

Query: 70  QMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEGVTGEYEVWQ 129
           Q+W KQFIP THNLQE +FSY+LED   KK Q V A+KS+RK+K KGH+EGVT  YE WQ
Sbjct: 109 QVWLKQFIPPTHNLQESDFSYDLEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQ 168

Query: 130 MNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKLRKETTQWMN 189
            NRRK+I   I +E  E+ +E + +Q +QW ++   +EE+N+LLEQENEKLRKET+QWM+
Sbjct: 169 ANRRKNIID-ISREVVERGKETSFEQPNQWIKKSIELEEKNRLLEQENEKLRKETSQWMD 228

Query: 190 HATQIQKEINKTKGLLENHNELENGYKALGKEMRPRGNRSSLQTGELDKTVEIELPVPDI 249
           HA  +Q E+ K K  L+N ++LE   + L KEMR R N+++        T++  +   D 
Sbjct: 229 HAAYLQNELEKNKSSLKNQDKLEKNLETLDKEMR-RMNKANRSLKNEKTTLKATVGSEDE 288

Query: 250 LPTSAESSRSSSSYFPNQVMSGL 273
                ES +     F N + + +
Sbjct: 289 YIKDLESGKEYFLEFVNDLHTSI 309

[Close]

BLAST of Spg020024 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66
Identity = 167/418 (39.95%), Postives = 216/418 (51.67%), Query Frame = 0


Query: 1   EFGVAVWDPTYPKKEAWMSFFTTIKSENIIWKAPWMPLKAMTYRCGDFYSVPLLGPWEGI 60
           EFG+AVWDPTYP+KEAW+SFF  + SEN+IWKA WMPLKA+ YRCGDF+SVPLLGPW G+
Sbjct: 242 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGV 301

Query: 61  NYATLLVLRQMWFKQFIPVTHNLQELEFSYNLEDFSEKKCQTVNAFKSVRKVKSKGHHEG 120
           NY  LLVLRQ+W KQFIP THNL                           K+K KGH+EG
Sbjct: 302 NYTPLLVLRQVWLKQFIPPTHNL---------------------------KIKDKGHYEG 361

Query: 121 VTGEYEVWQMNRRKSITKFIPKEKDEKPEEPAHDQLSQWSEECRRMEERNQLLEQENEKL 180
           VT  YE WQ NRRK+I   I +E  E+ +E + +Q +QW E+   +E++N+LLEQENEKL
Sbjct: 362 VTSGYEAWQANRRKNIID-ISREVVERGKETSFEQPNQWIEKSIELEQKNRLLEQENEKL 421

Query: 181 RKETTQWMNHATQIQKEINKTKGLLENHNELENGYKALGKEMR--PRGNRS--------- 240
           RKET+QWM+HAT +Q E+ KTK  L+N ++LE   + L KEMR   + NRS         
Sbjct: 422 RKETSQWMDHATYLQNELEKTKSFLKNQDKLETDLETLDKEMRRMNKANRSMKNEKTTLQ 481

Query: 241 -----SLQTGELDKTVEIELPVPDILPTSAESSRSSS------------SYFPNQVMSGL 300
                 L+  E  +  +I     D L     + ++SS             Y   +V   L
Sbjct: 482 ATVGLHLKMAERSEEYKILKNYADFLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDL 541

Query: 301 H----HVYVERFNVSV---------------------GSTGIVRGDDVCWLHAVFRAKLA 344
           H     V VER + ++                       T I    +  +   +   K  
Sbjct: 542 HTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAGKYSSFTPIRHPYNTRYKSQIMEEKDK 601

The following BLAST results are available for this feature:

BLAST of Spg020024 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036941.1	1.2e-73	61.90	girdin-like [Cucumis melo var. makuwa]	[more]
XP_031740432.1	1.2e-73	60.43	uncharacterized protein LOC116403430 [Cucumis sativus]	[more]
KAA0044912.1	4.5e-73	61.90	girdin-like [Cucumis melo var. makuwa]	[more]
XP_031739496.1	4.9e-72	60.36	uncharacterized protein LOC116403043 [Cucumis sativus]	[more]
TYK16558.1	4.2e-71	61.40	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of Spg020024 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5S7	5.7e-74	61.90	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5A7TNJ1	2.2e-73	61.90	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5D3CZ50	2.0e-71	61.40	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5D3DK34	4.0e-67	52.47	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]
A0A5A7T1W2	1.1e-66	39.95	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Spg020024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..190
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 11..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020024.1	Spg020024.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0003676	nucleic acid binding