Spg018793 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018793
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 14093538 .. 14095428 (+)
RNA-Seq ExpressionSpg018793
SyntenySpg018793
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGGACATTCGGTTCCATGGAGCAAGATGGAGGGGGAGAGGCAGATATAACAAGTTATGGAGGAATCGTGGAGAAAGGGAAACCGAAATCAAATGGGGGAAAAGGCACCACGAAAAAGAAGAAGAAAAGGAGTTGAGTTCTTCAGAGAGGTCGTCGGATAATCGGAGCAACGGTGACCGGAATCAGGAGGAAAGAGAAGAGGAAAGGAAAATTGATACGTCAATGTCAGAGGACATGTTCGAAAAGGCAGGGAAAAGAACAGACATGGGTCAAAGCAGTGGACAGACAAACATCCAAAAGGAAATCTTTGCGCCGCAGGGTATGACAAAAATAAAGACGTTGGGGGTACTCTGGAAAAGGCAAAGAGGAAATTGGGCTAGGTCAAGAACATATAAATAAGCATCAGATGAATGGGCCAAGAGGAATAGAAGCCATTGGAGATCGTAATCAACAAGAGGAAATGGAAAAGGGGCAACAAGAAAAATGGCTAAAAATAAATAGGTGGCTTGAAAAATGGCTACAAAAGTTTATAAATTAAATAGATGGCTAAACGTTTTACTGATTAATAAAATCCTATTTGTAAAAGACACAAATGCCCCCCAACAAACTGCCTAACGTGTTCCTAACGTTAAAAATTAAAATCAGATTTTATAAGAGATAAAATACACCCCTAAAAATAAGTTGGAGAAATTTTAGGAAGCTTGAAATTCAAAAATTAAAGAAACAAATACTAGTTTCAAAATCTAGAAAAAGTCGTATCATATTGTTACTACTGGAAAAAAATTGTTTCCCGGAAAAAGGAGTCGATACCTTTATTGGGGAAGGAATACAATGCCCAACCTCCCCCAGTAGAGAGAAACACCTTCGGACTACATTAATTGAAAAACATAGTCCTCTCAATAAGAGTATATACTACCTGCAAATAAGAAAACCTTAGAAAACAACTTAGTAAATGTTGTACAAAATTGGTCATGAAACAACTAACAAAAAAAGGACCTTAAAGGCTGCCATTATGACCTGTCAAATCACCGCACACCCTCCCACCAGAACGCCACCATGCATTGCGTCACCCCCCGTCGGTCCATCTTCATCTCCCTCCCCTCAAAAACCTTGAAAGACTTAATCCTCCATTTCCCACCATTTTCCACCCCCAACACAGAGTGTATACCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGGCGACCTTCTTCCGCGCCGTCGAGACTCCTGCTAGCCCCACATCCTCCATCGATTCTCCTTCTGCGCGAGGACTATACAATTTCTCAGAAATTCAAACTAAGGTAACGGCTTCATTCCCATTCCCTTATATTAGCAACAAACTGATACATTCCCCCTAGATTTTAGGGATTTTGTTTCTTCCATGCAATCCGAGAATATTACGCTCTATTGTAAGCAGAGACCAAAAAAGACTAAGCCCGTGGAGGTAAGACTCTGTATTTACTCTTTAGGTTGTGTAAAACATGCTGTAATTACTCGTGTAATTGTGTTAAAAAACAGGAAGAAGTTGACGCAAGTGCCGATACGGGGGAAAACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGTAAAAAAGATCACCCACAACATCCCCCTTGTGAATTACAAATTAGAGAATTAAACTCCCTAATTAACATCTAGGATGCGAAGAGACCCAAAGGGAAGGACAAACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAACCCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGTGTGGTCATATGAAAGTGTGTGA

mRNA sequence

ATGAAACAGGACATTCGGTTCCATGGAGCAAGATGGAGGGGGAGAGGCAGATATAACAAGTTATGGAGGAATCGTGGAGAAAGGGAAACCGAAATCAAATGGGGGAAAAGGCACCACGAAAAAGAAGAAGAAAAGGAGTTGAGTTCTTCAGAGAGGTCGTCGGATAATCGGAGCAACGGTGACCGGAATCAGGAGGAAAGAGAAGAGGAAAGGAAAATTGATACGTCAATGTCAGAGGACATGTTCGAAAAGGCAGGGAAAAGAACAGACATGGGTCAAAGCAGTGGACAGACAAACATCCAAAAGGAAATCTTTGCGCCGCAGGATTTTAGGGATTTTGTTTCTTCCATGCAATCCGAGAATATTACGCTCTATTGTAAGCAGAGACCAAAAAAGACTAAGCCCGTGGAGGAAGAAGTTGACGCAAGTGCCGATACGGGGGAAAACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCCAAAGGGAAGGACAAACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAACCCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGTGTGGTCATATGAAAGTGTGTGA

Coding sequence (CDS)

ATGAAACAGGACATTCGGTTCCATGGAGCAAGATGGAGGGGGAGAGGCAGATATAACAAGTTATGGAGGAATCGTGGAGAAAGGGAAACCGAAATCAAATGGGGGAAAAGGCACCACGAAAAAGAAGAAGAAAAGGAGTTGAGTTCTTCAGAGAGGTCGTCGGATAATCGGAGCAACGGTGACCGGAATCAGGAGGAAAGAGAAGAGGAAAGGAAAATTGATACGTCAATGTCAGAGGACATGTTCGAAAAGGCAGGGAAAAGAACAGACATGGGTCAAAGCAGTGGACAGACAAACATCCAAAAGGAAATCTTTGCGCCGCAGGATTTTAGGGATTTTGTTTCTTCCATGCAATCCGAGAATATTACGCTCTATTGTAAGCAGAGACCAAAAAAGACTAAGCCCGTGGAGGAAGAAGTTGACGCAAGTGCCGATACGGGGGAAAACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCCAAAGGGAAGGACAAACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAACCCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGTGTGGTCATATGAAAGTGTGTGA

Protein sequence

MKQDIRFHGARWRGRGRYNKLWRNRGERETEIKWGKRHHEKEEEKELSSSERSSDNRSNGDRNQEEREEERKIDTSMSEDMFEKAGKRTDMGQSSGQTNIQKEIFAPQDFRDFVSSMQSENITLYCKQRPKKTKPVEEEVDASADTGENHSIEDDYSSSDSGDEGDSKKKKTVDKKDAKRPKGKDKRTKRDESEEVEPTRAVCTDKYYSIIVANSSGKYVVVWSYESV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018793.1Spg018793.1mRNA