Spg018529 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018529
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 4899606 .. 4902202 (+)
RNA-Seq Expression	Spg018529
Synteny	Spg018529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAATTTGAAATCAGCAACATCGCACAAGATCACTCGTTCCCAGAGTAATCCAACCGCCCAAGAAGCTGAAGCACGCGTCCGACGACCAGAAGAGCAAGTCGAAACACCCATGCACGGCACAAGAAGAACGAGACCTTCGGGTTTTTCATCAACAACAGTGGATCAAGGTACTTCAACTCAAGTGCCTTCCTCCTCGATAATGCCAGCTACGTCGAGGGAGAATCCGAGTACTTCCCAGCCACGGAGGTTCACGCGTACCACTGCCGTTCATCTAACCCAAAAACCCGCAACTCAACAATTCAAAAAACGCTCTCGAGAGTGGTTCAAGATGATTCGGGAGATGGGAGTCCAGAGACGTGTTGCTCTTAAAGAAGAAGCCAATAGGCGAGATGAAGAAGAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAAGAGGTTCCAATGGGTAAAACCTCTGAACCTTCGACTAACCCCTCTCCATCTTGCAGGAACAAGTCGTTCGTTACCTACAGTGCAAGAAAGAGGAGTCCCAAGAAGGATTTACCCAAGAAGCCGCTTGTAATTGAGCCCATTAAAACTGCAAGGATGCCCCCGGATGTTTTCGAAGGCATGATCCGCGAAGTTGTGGCAAAGGCTCTGGTTATTGCCAAAGGCTATAGGGCTGAACAAGAGGCTCTGAAGGATATTGAGGCTGAAAGAGGCTTTGAAAATCAGCAAATGGGGGGAGAAGATTATTTTGCGAAGAAAAGAGATGCAGAAGAAAAAGAAGAAGACAAAAGGAGAGAAGACGAGCAAGAGGCCGAGAGGGCCAGATTAGCTGAAGAGGAAGAAAGAAGGTTAGGTGAAAACCTCAGGAGGGCAGGCATTGAATTGCAACTCCTAGAGGAAGAAAAACGAAAAAGAGAAGAATTGAAAGAAGATGAAAGAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGTTGAGTTGCTACGAGGAAGGGAGGAAGTGGCCCAGCAGGGGCCAAGAGAAGAAAACTTAGAAAAAGAAAAAGAAAAAGAAGATGAAGGACATAATGTGACCACATCTGGGCCGCATTCTGAAGAAGGCCTAGCTGAGGCCAATGAAGCTCAGCCTGCTGATGAGGTTTTCGAACCTCTATTTAAGTATGACCCACCGGCAGTTGACAACACCTCTTTAGGATAGAAGAGGGATGAAGAAGAAAAGGAAGACAAGGAGGCCAAGACCTCTACTGACTCTGAAACAAAATCTGATTCAGAGATCAAGGAGCCGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAAGAGAACGAGAAAAAGAGAGATAAAGGTTGAAAGGAGGACCAAGAACAAGAACGATCCAATCTTTGCCAAGAGGCCGAGGACGAGGTCCATGGACGCCTCTCCAGCAGCTGCTCCTACCATCTCACCCACCAAACCCAAGGCCAAGTCACCGAAAGCTTCATCTCCCAAAAATCCATTTCCTGATGTGTTCAAAGATGTTAATTTTCAGGAGAGGATGGAGATAATGAGAAAGAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAGGATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCATCCCCAGGAGGCTGTAGTGCCTTTGATTCATGAAATTTATGCTGGTCTGAGGGAAAAGAGCATTAGCATGGCAGTGGTGAGGGGGAAGATGGTCAGTTTTTCTTCAGTCGACATTAATAGGGTGTAAAGGATCAAGGCACCCCTACATCCGAGAGGGAATGATGTGATAAAGAACCTTTCGGCCAAGCAAATGAAGGAAGCTCTGAAACTTGTGGCCAATAAAGTGTCCAATGCCAAGAGTCTCAGACAAAAGTGAAGTCCCTAGTGTCAAACGACTTAAAGCCAGAATCGACAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCACGACAGTACTATCTCAGTGGAAAGAGTTATGCTCCTCTACTGTATTATGAAGGGTTGGAAATCAATATGGGGAGCATAATAAGGGAGGAGATCCTAGCCTGCGGAAGAAAAAGGGCAGACAAGATTTTCTTTGGATCACTCATCACCCAGCTTTGTTAGAGGGTGAAGATTGTTCCAGGCAAGGACGAGGAGCGTCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGAAAGCTCCAGCAGAACAACATCCAGAGAAAGGATAAAGCCTACACATCTCAGGCCACTCCTCAATCAGGGCCGAGCATGGTTTCTCCATCCCATCACACTCCTTTCACAGGGCCTTCATCATCTTCTGAGGCCCTTGCCATTTTCTATCGCCAGATAGATCAACTCAGGGACAACCTGAGAACATATTTGGCATTTGCAAAGGAGAAGGACGAAGCCATTAGAGAGTTTTATCTCTCTATTGCCCCGAGTATTGCTCCAGTCTTTCCAAATTTCCCTCGATCGCTGCTGCCTAAGGAGGACAAGGATTCTGATGAAGAGAAGGAGAGTTCCTCGAATGAGGACTAG

mRNA sequence

ATGAAGAAAAATTTGAAATCAGCAACATCGCACAAGATCACTCGTTCCCAGAGTAATCCAACCGCCCAAGAAGCTGAAGCACGCGTCCGACGACCAGAAGAGCAAGTCGAAACACCCATGCACGGCACAAGAAGAACGAGACCTTCGGGTTTTTCATCAACAACAGTGGATCAAGGTACTTCAACTCAAGTGCCTTCCTCCTCGATAATGCCAGCTACGTCGAGGGAGAATCCGAGTACTTCCCAGCCACGGAGGTTCACGCGTACCACTGCCGTTCATCTAACCCAAAAACCCGCAACTCAACAATTCAAAAAACGCTCTCGAGAGTGGTTCAAGATGATTCGGGAGATGGGAGTCCAGAGACGTGTTGCTCTTAAAGAAGAAGCCAATAGGCGAGATGAAGAAGAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAAGAGGTTCCAATGGGAACAAGTCGTTCGTTACCTACAGTGCAAGAAAGAGGAGTCCCAAGAAGGATTTACCCAAGAAGCCGCTTGTAATTGAGCCCATTAAAACTGCAAGGATGCCCCCGGATGTTTTCGAAGGCATGATCCGCGAAGTTGTGGCAAAGGCTCTGGTTATTGCCAAAGGCTATAGGGCTGAACAAGAGGCTCTGAAGGATATTGAGGCTGAAAGAGGCTTTGAAAATCAGCAAATGGGGGGAGAAGATTATTTTGCGAAGAAAAGAGATGCAGAAGAAAAAGAAGAAGACAAAAGGAGAGAAGACGAGCAAGAGGCCGAGAGGGCCAGATTAGCTGAAGAGGAAGAAAGAAGGTTAGGTGAAAACCTCAGGAGGGCAGGCATTGAATTGCAACTCCTAGAGGAAGAAAAACGAAAAAGAGAAGAATTGAAAGAAGATGAAAGAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGTTGAGTTGCTACGAGGAAGGGAGGAAGTGGCCCAGCAGGGGCCAAGAGAAGAAAACTTAGAAAAAGAAAAAGAAAAAGAAGATGAAGGACATAATGTGACCACATCTGGGCCGCATTCTGAAGAAGGCCTAGCTGAGGCCAATGAAGCTCAGCCTGCTGATGAGAAGAGGGATGAAGAAGAAAAGGAAGACAAGGAGGCCAAGACCTCTACTGACTCTGAAACAAAATCTGATTCAGAGATCAAGGAGCCGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAAGAGAACGAGAAAAAGAGAGATAAAGGTTGAAAGGAGGACCAAGAACAAGAACGATCCAATCTTTGCCAAGAGGCCGAGGACGAGGTCCATGGACGCCTCTCCAGCAGCTGCTCCTACCATCTCACCCACCAAACCCAAGGCCAAGTCACCGAAAGCTTCATCTCCCAAAAATCCATTTCCTGATGTGTTCAAAGATGTTAATTTTCAGGAGAGGATGGAGATAATGAGAAAGAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAGGATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCATCCCCAGGAGGCTGTAGTGCCTTTGATTCATGAAATTTATGCTGGTCTGAGGGAAAAGAGCATTAGCATGGCAGTGGTGAGGGGGAAGATGTGTCCAATGCCAAGAGTCTCAGACAAAAGTGAAGTCCCTAGTGTCAAACGACTTAAAGCCAGAATCGACAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCACGACAGTACTATCTCAGTGGAAAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTGAAGATTGTTCCAGGCAAGGACGAGGAGCGTCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGAAAGCTCCAGCAGAACAACATCCAGAGAAAGGATAAAGCCTACACATCTCAGGCCACTCCTCAATCAGGGCCGAGCATGGTTTCTCCATCCCATCACACTCCTTTCACAGGGCCTTCATCATCTTCTGAGGCCCTTGCCATTTTCTATCGCCAGATAGATCAACTCAGGGACAACCTGAGAACATATTTGGCATTTGCAAAGGAGAAGGACGAAGCCATTAGAGAGTTTTATCTCTCTATTGCCCCGAGTATTGCTCCAGTCTTTCCAAATTTCCCTCGATCGCTGCTGCCTAAGGAGGACAAGGATTCTGATGAAGAGAAGGAGAGTTCCTCGAATGAGGACTAG

Coding sequence (CDS)

ATGAAGAAAAATTTGAAATCAGCAACATCGCACAAGATCACTCGTTCCCAGAGTAATCCAACCGCCCAAGAAGCTGAAGCACGCGTCCGACGACCAGAAGAGCAAGTCGAAACACCCATGCACGGCACAAGAAGAACGAGACCTTCGGGTTTTTCATCAACAACAGTGGATCAAGGTACTTCAACTCAAGTGCCTTCCTCCTCGATAATGCCAGCTACGTCGAGGGAGAATCCGAGTACTTCCCAGCCACGGAGGTTCACGCGTACCACTGCCGTTCATCTAACCCAAAAACCCGCAACTCAACAATTCAAAAAACGCTCTCGAGAGTGGTTCAAGATGATTCGGGAGATGGGAGTCCAGAGACGTGTTGCTCTTAAAGAAGAAGCCAATAGGCGAGATGAAGAAGAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAAGAGGTTCCAATGGGAACAAGTCGTTCGTTACCTACAGTGCAAGAAAGAGGAGTCCCAAGAAGGATTTACCCAAGAAGCCGCTTGTAATTGAGCCCATTAAAACTGCAAGGATGCCCCCGGATGTTTTCGAAGGCATGATCCGCGAAGTTGTGGCAAAGGCTCTGGTTATTGCCAAAGGCTATAGGGCTGAACAAGAGGCTCTGAAGGATATTGAGGCTGAAAGAGGCTTTGAAAATCAGCAAATGGGGGGAGAAGATTATTTTGCGAAGAAAAGAGATGCAGAAGAAAAAGAAGAAGACAAAAGGAGAGAAGACGAGCAAGAGGCCGAGAGGGCCAGATTAGCTGAAGAGGAAGAAAGAAGGTTAGGTGAAAACCTCAGGAGGGCAGGCATTGAATTGCAACTCCTAGAGGAAGAAAAACGAAAAAGAGAAGAATTGAAAGAAGATGAAAGAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGTTGAGTTGCTACGAGGAAGGGAGGAAGTGGCCCAGCAGGGGCCAAGAGAAGAAAACTTAGAAAAAGAAAAAGAAAAAGAAGATGAAGGACATAATGTGACCACATCTGGGCCGCATTCTGAAGAAGGCCTAGCTGAGGCCAATGAAGCTCAGCCTGCTGATGAGAAGAGGGATGAAGAAGAAAAGGAAGACAAGGAGGCCAAGACCTCTACTGACTCTGAAACAAAATCTGATTCAGAGATCAAGGAGCCGAATGATGACCAAGTTCCTATCTCTGCAGCATTGAAGAGAACGAGAAAAAGAGAGATAAAGGTTGAAAGGAGGACCAAGAACAAGAACGATCCAATCTTTGCCAAGAGGCCGAGGACGAGGTCCATGGACGCCTCTCCAGCAGCTGCTCCTACCATCTCACCCACCAAACCCAAGGCCAAGTCACCGAAAGCTTCATCTCCCAAAAATCCATTTCCTGATGTGTTCAAAGATGTTAATTTTCAGGAGAGGATGGAGATAATGAGAAAGAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAGGATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCATCCCCAGGAGGCTGTAGTGCCTTTGATTCATGAAATTTATGCTGGTCTGAGGGAAAAGAGCATTAGCATGGCAGTGGTGAGGGGGAAGATGTGTCCAATGCCAAGAGTCTCAGACAAAAGTGAAGTCCCTAGTGTCAAACGACTTAAAGCCAGAATCGACAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCCACGACAGTACTATCTCAGTGGAAAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTGAAGATTGTTCCAGGCAAGGACGAGGAGCGTCATTTCTTTAAACCAACTATTGACTTGTCCTTGATAGGAAAGCTCCAGCAGAACAACATCCAGAGAAAGGATAAAGCCTACACATCTCAGGCCACTCCTCAATCAGGGCCGAGCATGGTTTCTCCATCCCATCACACTCCTTTCACAGGGCCTTCATCATCTTCTGAGGCCCTTGCCATTTTCTATCGCCAGATAGATCAACTCAGGGACAACCTGAGAACATATTTGGCATTTGCAAAGGAGAAGGACGAAGCCATTAGAGAGTTTTATCTCTCTATTGCCCCGAGTATTGCTCCAGTCTTTCCAAATTTCCCTCGATCGCTGCTGCCTAAGGAGGACAAGGATTCTGATGAAGAGAAGGAGAGTTCCTCGAATGAGGACTAG

Protein sequence

MKKNLKSATSHKITRSQSNPTAQEAEARVRRPEEQVETPMHGTRRTRPSGFSSTTVDQGTSTQVPSSSIMPATSRENPSTSQPRRFTRTTAVHLTQKPATQQFKKRSREWFKMIREMGVQRRVALKEEANRRDEEEAAKAAESSRQRGSNGNKSFVTYSARKRSPKKDLPKKPLVIEPIKTARMPPDVFEGMIREVVAKALVIAKGYRAEQEALKDIEAERGFENQQMGGEDYFAKKRDAEEKEEDKRREDEQEAERARLAEEEERRLGENLRRAGIELQLLEEEKRKREELKEDERRRKEAEDFLAAFEPLHKAQSEVELLRGREEVAQQGPREENLEKEKEKEDEGHNVTTSGPHSEEGLAEANEAQPADEKRDEEEKEDKEAKTSTDSETKSDSEIKEPNDDQVPISAALKRTRKREIKVERRTKNKNDPIFAKRPRTRSMDASPAAAPTISPTKPKAKSPKASSPKNPFPDVFKDVNFQERMEIMRKRDFLNEKGFSNRAGALPEFVSRIISQYKWQDFCAHPQEAVVPLIHEIYAGLREKSISMAVVRGKMCPMPRVSDKSEVPSVKRLKARIDSLASLHQEPLDANHPRQYYLSGKSYAPLLYYEGVKIVPGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKAYTSQATPQSGPSMVSPSHHTPFTGPSSSSEALAIFYRQIDQLRDNLRTYLAFAKEKDEAIREFYLSIAPSIAPVFPNFPRSLLPKEDKDSDEEKESSSNED

Homology

The following BLAST results are available for this feature:

BLAST of Spg018529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018529 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018529 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 265..305
None	No IPR available	COILS	Coil	Coil	coord: 241..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 725..750
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 646..675
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018529.1	Spg018529.1	mRNA