Spg016992 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg016992
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold9: 45562904 .. 45570070 (-)
RNA-Seq Expression	Spg016992
Synteny	Spg016992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGTTGCGATTTCCGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTTAGGACCACACAGATGATCTCCAACCTTGCAGGTATGTGCGAGGGATTAGAGGAAGAAGAAGAGATTTTCGATGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAAGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACTTACTTTCCGGTGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGGGGGTTTGGTAAGTCCAAGGCAATCCGGCAAAATCGTACCGCAGACGCCAGTTGCAGCAGATATGGCAGAGAAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTGGAGAAGGGAGAGTTGGGCCTGGGCATGGGTCTAAAAATGGGCTGCGGGCTGATAATCCAATTTTTAACTTAGAAGACAATGGTATTATTAATTCTGAAGCCCAGAGTGTGGTTTGTAACAAGCTGAATAAGGAGGGAGATGGGCCGGCGAAGATAAAAGATGGGCAGGGGCCTGACCTTTCCCAGAAGATGGTCTCTTCGACAGAATCTCTTGGGCTCAACTTGTATGACTTAGAGTGGGACGGTGTAATTAACCAAGCGGAGGATTTCAGTATTGAGGAAGAGGCGGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGATGTTTTCAGAGGAGAAATCGCCGACTCAACTTGCCAGCCCGGTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGATGGTAGGGGTGCCGCAAGATGTCTCGACTTTAGGGGATCCGACTCAACCGCTGATCAAGGTAAATTCTGACGGGATTCCTATCCAGGTACGCTCTTCTTCTTTGGATCCTTCACCTTCTAATTCGATTGAGAGGGGAGGGTGGATGTGTGCTGGGGGGTTGTCTTATCCATACCCTTATTCTGTAGCCTTACCGTTGGGAGAAGGAAAGGGAGAGTTCTTGGGCTTTAATCATAACCTCGGGCATCCTGTTTTTTTGAATACTTTCCAACCTTCTGGAAGTGCCTTTTCCTACCCGTCTGCTTATTCCATAGGAGAGAGAATGCCGCCATTTGCTTCCTTTGCTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGACTTGTGAACAATATTCCTTTACCTATTTATAGCCTCTCGGACCTTGAAGGCCTATCTGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCATTAGCGTCGATTGGGATAAGAGAAGTCCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGTAAAACCCCTAACAATAAGACAGGAGACTCAAAAAAAGTTGATAGGGAATTGAGAAGATTGGCGTCATCTGTGAACTATGACAGGAGAAAGACCTCTAAGGAGGTCGGGGAAGCGTCGGGTTCCAAATGAAAATGATATCCTGGAATGTGAGAGGCTTGGAGGGGAGAGAGAAGCGCAGGGTGGTTAAAGAGGTTATCTCTCAGGAATCCCCAGACATTGTGATTTTGTTGGAAACCAAGAGGTATAAATATAATCGTGATTTTGTTCGTAGCATCTGGGGAAATAGAAAAGTGGAGTGGACCGGTATTGAGTCGGTGGGAGCCTCAGGAGGGGTGCTCATTATGTGGAACAGTATCTCTGTGAACTGTCTGGAGGTGCAGATGGGTGTGTTTACTGTGTCTATTAACATTACCTAGAAGGGCAAGGACTTAGGGTGGGTCACCGGTACCTACGGCCCTCTAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCGGTGATCTTTTTGGGTTATGTGGGAACAACTGGTGCATTTTGGAGGATTTTAATGTCACTCGTTCCCCTTTAGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGTTTTTCAATGAGTGGATTGAAGGCTGTAGTCTGTATGATCCTCCCTTATTTAACGGGAAGTTTACTTGGGCTAACAATAGAGCGCGTAGTAGAATTGACATAATCTTGTGTGCTCAGGGTTGGATGGATACCTTCAAGTGTGTCAAGCAATCCTTAAGTCCTAGAGTTACCTCTGATCATTGGCCTTTAATCTTTGTTTCGGGCCCTTAGAAGTGGGGGCCTTGTCCCTTTCGCTTTGAGAATATGTGGTTGGATCACCCTTCCTTCAAATCTTCCTTCCAGTCCTGGTGGAATGTGGAGGTTTCAGGGAAGTGGGAAGGCTACAGATTTATGAATAAACTTAGATCTCTCAGAAGTAACCTTAAATTGTGGAATCAAGAAGTTTTTGGGGATATTAGGATTGAGAAGCAGGAAGTGATGAATAGAATTAAAGAGATTGATGCTCTGGAGGAGGATGGGCTTATTGATGAGACTTTAAAGGCTGAGCGCTTGTCTCTCAAATGTGAGTTTGCTAAGTTGGTTGAGAAGGAGACTATTAGTTGGAGACAAAAGGCTAAGGTTAAATGGGCTAAGGATGGAGATTGCAATTCAGCTTTTTTCCACAGGATGGCTAGTGGTAGAAGAAGCAAGAACATGATAGGCCCTCTTGAGAATAACATGGGGGTGATGCTCCATGAGGAGGAAGATATTGAGAGGGAGATCATTTCTTTCTTTTCAAATCTTTATGCTCCTTAGGAGTCCCCCAAGCCCTTTGTTGAAGGAATCGCCTGGAACCCTATATCTGAGAGGGAGAAAAATGATCTGGATGCCCCCTTCTCTTTGGAGGAAATTAGAAAGGCGGGTTTTGATTGCGATAGAGATAAAGCCCCAGGCCCGGATGGCTTTTCTATGGCTTTTTTTTCAGGATAACTGAAACGGAATTAAGGGGGATCTGGAGCGTGTGTTTAAAAAATTCTTTGAGCGAGGCATTTTGGATAGTTCGTTAAATGAGACCTTTGTGTGCCTTATCCCCAAGAAAGACAGAGCTAACAAAGTGAAAGACTTCAGACCTATTAGTCTGATCACAAGTGTGTATAAGATCATTGCCAAGGTGCTCACTAAGAGACTGAAAAAAGTTCTCCCATCAACTATCAGTGAGGCTCAGGGGGCTTTTCTTGAAGGCCGACAAATCTTGGATCAAGCCCTTATTGCGAATGAGGCTATTGAGGACTATCGTGGGAGTGGGCGTGAGGGAGTGATCTTTAAGATTGACTTTGAGAAGGCCTATGATCATGTGGACTGGAATTTCTTGGACAAGATCTTGGTTAAGAAAGGGTTTGGGTACAAGTGGAGATCTTGGATTTGGAGTTGTACAAGATCAGTTACGTATTCGATTCTCATCAACGGGAGACCAAAGGGCAGAATTCGGGCTACCCAGGGCCTTCGTCAAGGGGACCCCCTATCCTCATTTCTCTTCCTCCTGGTTGTGGATGCCCTTAGTAGAATCATTTATAGAGGAGTGAAGGGCAAAATTCTTGAAAGTTTCGAAATCGGTCAGAACAAGGTTCCTTTATCCCACCTTTACTTCGCGGATGATACGATCTTCTTCTGTTCTGGAAAAGAGGATTCCTTCTTACTTTTGAACCACATCCTGGCCTTCTTTGAATCCATGTCTGGCCTGAAAATTAATAGGGGTAAATGCCAGATTTTGAGCCTGAACTGTGAGGCTAGCAAGGTGAGGAGATGGGCTGAGCTTGTTGGTTGTGACATGAGCTTGTTCCCTTCTTCTTACTTAGGCTTGCCGTTGGGGCATAACCCGAGATCTACGCTGTTCTGGGACCCTGTAGTGGATAAGGTGAGGAAAAAACTTGCAAATTGGAAAAAGAGCTTTTTCTCCAAAGGAGGTAGGTTGACCCTCATCCGATCTGTGTTAAGTGGGATTCCTATCTATTATTTCTCCCTCTTTAGAGCCCCATGTTCGGTGTGTAAGGCTCTCGAGAAGCTTATGAGGGACTTTCTGTGGGAAGGTGTGGATGAAGGAAAATCTATGCATCTCGTGAGATGGGAGTTAGTGGGGAAGTCTTTAAGTCAGGGGGGACTAGAGGTGGGTAATTTGAGAATTCGTAACAAAGCTTTACTGGCAAAATGGCTTTGGTGCTTTTACTCTGAATCCAACACCCTGTGGCATAGGATTATTATTAGCAAATACGGCCCTCATCCTTCTGAATGGGTAACAGGGGGGATCAAATGCACTTCTAGAAATCCATGGAAAGAAATCTCTCGTGAGCTCCCTTTTCTGACCTCTTTTATTCGTTGTTCTGTGGGGAATAGGGAGGATACATATTTCTGGGAGGACAGGTGGGTGGGGGAGAGACCCCTTTGCGCTACTTTCCCTCGGCTTTATCATTTATCTTCCATGAAAAATCGTTATTTGCCGAGGTTTTGAACCCTTTAGGGAGCTCTCTATCCTACTCTTTTGGCTTCGCGCGGTCTTTAACCGATAGAGATACTACTGACCTTCTATCTCTTCTGTCCTTGATTGAGGAGACCACCTTCAGTACTTCGAGGAGGGATTTTCGTTTGTGGAACCCCAACCCCTCCATGGGCTTCTCTTGTCGGTCCTTCTTCCATTGCTTACTAAATTCTTCTCCCACCGTGTCGTCCATTTTTTCCATGTTATGGAAGGTGAAGGTCCCAAAAAAGGTGCAGTTTTTCATCTGGCAGGTTATCCATAGAAGAGTTAATACTCTTGACCGGCTCTCCAGAAAGATCCCTTGCTTGATCGGGCCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAGACCTCGACCATATTTTGTGGAGGTGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGTCTCGTTTGGTTTGCAGTTTGCTAGGCACAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCCATCCCCCTTTTCGTGAGCAGAGGAGATTCTTGTGGCAAGCAGGGATTTGCGCTATTATTTGGGGGCTTTGGGGCGAGAGAAATAATAGGACGTTTAGAGGGTTTGAGAGGGACTCGTCTGAGGTCTTGTCCCTAGTGAGATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTATAATTATCCTATAGGTCTTATCATTTTGGATTGGAGCCCCTTTTTATAATGGGGTTTCCCTTTTTTTTTTTTGTGGGCTGGTTGCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCATGGTTATTCATCAAAAAAAATATATATATGGGTAAAATTAAAAAATGTTAAAGTTACTAGTTTATTAACTTTCAAAGTTGTGTACCAAAGTTAAGCATAACTTAGCAATAACTAATATGTACTTTCGATCAAAAAGTTAGAGGTTTAAGTCCCTCCACCCTCAAATGTTTTGTTGAACTAAAAAGTCTATGTTTGATAAGACTACGACCTTTTAATCTTATGCTTATATGTGGACATTTCTAAGACATAGCAAACACTTTCTAAAATTCAAACATTTAGATACAATTACCGTTTATGAATTAAACTTGTAATTTAAGTTTAAAAAATAAGTCAAGACATAGAGTAAGTGGAGACATTATGAACAATGGAGATTAGGATTGGTTGCAAAGTCTTTAAAAAAAAATTCTAAACTTTTTCATTTTTAAAACAAACATTTTTTCTAATCTTAGGACTGAATCTCATTTGGAGAAACAAACCCATGGTATAGTATAGCATTAAAATTATGAAAAAGAAGAAAAGCTGAAAAAGGAGTAAAATAATGGGGGAGATGTGATGGCACCATACCAGAACCAGAAAGATGAAGGACGGCAATTAGGCCAACTTAATCATTGGACCTCTTGACCTGACGTGGACGACGGTGACTTCCAACTCAATCTTACAACTTCCCACGTCACTCTTAACTCCACTCCACAACACAACCACTTTAGCTGCTTCCAACACCAATACAAAATTCCAATACCAATACCAATTCCAATTCCAAATCCCTTCTCTAATTCTCTATGCCGACACCCACTTCCCCTTCTCATCCAATCCAATCAAATGGCGCCGTACAACTCACTACACACTCTTTAAAGAAAAGAAAAGGCAGACTTTATGGACCGAACTTTATTTCTCGTCAATCTTCCCTCTTCGTCCAGTCTCCCTTTGAATTTTGAATATTACACCCACCTATTCAAAAAGTTTGGATAACTATCCTTCACCACTTCCAAGTCCAACCACTCTCATTTCAAACCAAGTACAGAACCAACCCCCACATACTATTGCTCAACAGTGTGATCAAATGAGACTCGAATCAAACGAAACGTTTTCTATGTTCCATGTGAATTTGGATTCATGGCCCTTTCACGTTTGACTTGTCTTCCCCAATCAAAATTCAAGGAGGTAGTGCTTTCCATTTGTTAGCAAAAATAAACAATTCTTATGCTATAAGCAATGCTTCTGTGTTCTGTCTCTATTGTAAATTCCAAATGTATGATGTTAGTGTTTGACAAATGCACTGCCAACCAGCGAGATCAATCAATGTCTAAAAGGGTTTCACCACATAAAAGATCCTTTCTTTTTCTGCGAGCCCCATGTCAAATGGCGACGGCTGCCTCAATACATCTGTATCTGCTTTTTATTAAATCTATCGCCTAAAGACTAAACCAAACCAGTTGAAAATTGAAAGAGCAACTCTTCTAGTCAAAAAGTCGATTAGGTCCATTGTAAAGTACGCAGTACCACACCGCAAGTGCCAAACAGATAACAAAACTTGAATGGAAAGCTAAATTTGGAGCTTATGAAGCGGCCCCCAACTCAAAAGGGAGCATATGATTTTTATATTAGATGGAAGAGCAGATCAAATATCAAATCATCTTGGACAAAGAGAGCATGTCTATCGATTTTACATTAGACAGATATTGGAGAAAAGGTAAATGTTGGTAATGGAAAATCTGAACCTTCAAATGTGGAAGCCAAGTTGCCACAGCAGAAGTTGGAAGATTGGGGTGTTGGATAA

mRNA sequence

ATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGTTGCGATTTCCGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTTAGGACCACACAGATGATCTCCAACCTTGCAGGTATGTGCGAGGGATTAGAGGAAGAAGAAGAGATTTTCGATGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAAGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACTTACTTTCCGGTGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGGGGGTTTGGTAAGTCCAAGGCAATCCGGCAAAATCGTACCGCAGACGCCAGTTGCAGCAGATATGGCAGAGAAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTGGAGAAGGGAGAGTTGGGCCTGGGCATGGGTCTAAAAATGGGCTGCGGGCTGATAATCCAATTTTTAACTTAGAAGACAATGGTATTATTAATTCTGAAGCCCAGAGTGTGGTTTGTAACAAGCTGAATAAGGAGGGAGATGGGCCGGCGAAGATAAAAGATGGGCAGGGGCCTGACCTTTCCCAGAAGATGGTCTCTTCGACAGAATCTCTTGGGCTCAACTTGTATGACTTAGAGTGGGACGGTGTAATTAACCAAGCGGAGGATTTCAGTATTGAGGAAGAGGCGGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGATGTTTTCAGAGGAGAAATCGCCGACTCAACTTGCCAGCCCGGTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGATGGTAGGGGTGCCGCAAGATGTCTCGACTTTAGGGGATCCGACTCAACCGCTGATCAAGGTAAATTCTGACGGGATTCCTATCCAGGTACGCTCTTCTTCTTTGGATCCTTCACCTTCTAATTCGATTGAGAGGGGAGGGTGGATGTGTGCTGGGGGGTTGTCTTATCCATACCCTTATTCTGTAGCCTTACCGTTGGGAGAAGGAAAGGGAGAGTTCTTGGGCTTTAATCATAACCTCGGGCATCCTGTTTTTTTGAATACTTTCCAACCTTCTGGAAGTGCCTTTTCCTACCCGTCTGCTTATTCCATAGGAGAGAGAATGCCGCCATTTGCTTCCTTTGCTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGACTTGTGAACAATATTCCTTTACCTATTTATAGCCTCTCGGACCTTGAAGGCCTATCTGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCATTAGCGTCGATTGGGATAAGAGAAGTCCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGTAAAACCCCTAACAATAAGACAGGAGACTCAAAAAAAGTTGATAGGGAATTGAGAAGATTGGCGTCATCTGTGAACTATGACAGGAGAAAGACCTCTAAGGAGGGCAAGGACTTAGGGTGGGTCACCGGTACCTACGGCCCTCTAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCGGTGATCTTTTTGGGTTATGTGGGAACAACTGGTGCATTTTGGAGGATTTTAATGTCACTCGTTCCCCTTTAGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGTTTTTCAATGAGTGGATTGAAGGCTGTAGTCTCTCTCTATCCTACTCTTTTGGCTTCGCGCGGTCTTTAACCGATAGAGATACTACTGACCTTCTATCTCTTCTGTCCTTGATTGAGGAGACCACCTTCAGTACTTCGAGGAGGGATTTTCGTTTGTGGAACCCCAACCCCTCCATGGGCTTCTCTTGTCGGTCCTTCTTCCATTGCTTACTAAATTCTTCTCCCACCGTGTCGTCCATTTTTTCCATGTTATGGAAGGTGAAGGTCCCAAAAAAGGTGCAGTTTTTCATCTGGCAGGTTATCCATAGAAGAGTTAATACTCTTGACCGGCTCTCCAGAAAGATCCCTTGCTTGATCGGGCCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAGACCTCGACCATATTTTGTGGAGGTGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGTCTCGTTTGGTTTGCAGTTTGCTAGGCACAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCCATCCCCCTTTTCGTGAGCAGAGGAGATTCTTGTGGCAAGCAGGGATTTGCGCTATTATTTGGGGGCTTTGGGGCGAGAGAAATAATAGGACGTTTAGAGGGTTTGAGAGGGACTCGTCTGAGGTCTTGTCCCTAGTGAGATATAATACAGATATTGGAGAAAAGGTAAATGTTGGTAATGGAAAATCTGAACCTTCAAATGTGGAAGCCAAGTTGCCACAGCAGAAGTTGGAAGATTGGGGTGTTGGATAA

Coding sequence (CDS)

ATGGCAGTGGGTCTCTGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGTTGCGATTTCCGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGGCCCTGGATGTTCCACCATTTTTTAGGACCACACAGATGATCTCCAACCTTGCAGGTATGTGCGAGGGATTAGAGGAAGAAGAAGAGATTTTCGATGAGAATTGCTGGACCGATGAAATATGCTTCAAAGTCAAAGGGAATGATAGTGGTTTCATTCCCACGTCGTGCTACGTTAATCACGGGAAGACTTACTTTCCGGTGAGGTTCGTGATCGGAAAAGGGACGGGTTTCGAGCAGGCCGGCGGGGGTTTGGTAAGTCCAAGGCAATCCGGCAAAATCGTACCGCAGACGCCAGTTGCAGCAGATATGGCAGAGAAGAGGATCCCTTCTCCGAGAAGTCACGTGAAATCTGGAGAAGGGAGAGTTGGGCCTGGGCATGGGTCTAAAAATGGGCTGCGGGCTGATAATCCAATTTTTAACTTAGAAGACAATGGTATTATTAATTCTGAAGCCCAGAGTGTGGTTTGTAACAAGCTGAATAAGGAGGGAGATGGGCCGGCGAAGATAAAAGATGGGCAGGGGCCTGACCTTTCCCAGAAGATGGTCTCTTCGACAGAATCTCTTGGGCTCAACTTGTATGACTTAGAGTGGGACGGTGTAATTAACCAAGCGGAGGATTTCAGTATTGAGGAAGAGGCGGCATCTGATCCATCAGTCGTGAGTTACTCAGAGGACGAGTCATTCTTATCGACTCCGGCAGCCAAGGAAATAGAATCCATCAACCTGAATGCGATGTTTTCAGAGGAGAAATCGCCGACTCAACTTGCCAGCCCGGTACAGAAGGAAGACAATCAGATAATGCCTACTGAAGATTTGCAGAGGGATTCTTTGGCTTTGATGGTAGGGGTGCCGCAAGATGTCTCGACTTTAGGGGATCCGACTCAACCGCTGATCAAGGTAAATTCTGACGGGATTCCTATCCAGGTACGCTCTTCTTCTTTGGATCCTTCACCTTCTAATTCGATTGAGAGGGGAGGGTGGATGTGTGCTGGGGGGTTGTCTTATCCATACCCTTATTCTGTAGCCTTACCGTTGGGAGAAGGAAAGGGAGAGTTCTTGGGCTTTAATCATAACCTCGGGCATCCTGTTTTTTTGAATACTTTCCAACCTTCTGGAAGTGCCTTTTCCTACCCGTCTGCTTATTCCATAGGAGAGAGAATGCCGCCATTTGCTTCCTTTGCTGGTGTCCCGGGTAGTGGAATTGGGGGAGGTGTTCAACCTTTTCCAAATGGACTTGTGAACAATATTCCTTTACCTATTTATAGCCTCTCGGACCTTGAAGGCCTATCTGGAAATCATGGTTTTTGGCAACCGGGGTGGGCTGCATTAGCGTCGATTGGGATAAGAGAAGTCCCGGTTGATCAAACCCCCACTAATCACCTGATTGATGATAAAGATGGTAAAACCCCTAACAATAAGACAGGAGACTCAAAAAAAGTTGATAGGGAATTGAGAAGATTGGCGTCATCTGTGAACTATGACAGGAGAAAGACCTCTAAGGAGGGCAAGGACTTAGGGTGGGTCACCGGTACCTACGGCCCTCTAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTCGGTGATCTTTTTGGGTTATGTGGGAACAACTGGTGCATTTTGGAGGATTTTAATGTCACTCGTTCCCCTTTAGAGAAGGCTTCGGGAGGGAGGGTGTCTAAATCGATGAAGTTTTTCAATGAGTGGATTGAAGGCTGTAGTCTCTCTCTATCCTACTCTTTTGGCTTCGCGCGGTCTTTAACCGATAGAGATACTACTGACCTTCTATCTCTTCTGTCCTTGATTGAGGAGACCACCTTCAGTACTTCGAGGAGGGATTTTCGTTTGTGGAACCCCAACCCCTCCATGGGCTTCTCTTGTCGGTCCTTCTTCCATTGCTTACTAAATTCTTCTCCCACCGTGTCGTCCATTTTTTCCATGTTATGGAAGGTGAAGGTCCCAAAAAAGGTGCAGTTTTTCATCTGGCAGGTTATCCATAGAAGAGTTAATACTCTTGACCGGCTCTCCAGAAAGATCCCTTGCTTGATCGGGCCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAGACCTCGACCATATTTTGTGGAGGTGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGTCTCGTTTGGTTTGCAGTTTGCTAGGCACAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCCATCCCCCTTTTCGTGAGCAGAGGAGATTCTTGTGGCAAGCAGGGATTTGCGCTATTATTTGGGGGCTTTGGGGCGAGAGAAATAATAGGACGTTTAGAGGGTTTGAGAGGGACTCGTCTGAGGTCTTGTCCCTAGTGAGATATAATACAGATATTGGAGAAAAGGTAAATGTTGGTAATGGAAAATCTGAACCTTCAAATGTGGAAGCCAAGTTGCCACAGCAGAAGTTGGAAGATTGGGGTGTTGGATAA

Protein sequence

MAVGLCGSDKEAKDLIRMGSVAISDFFSVHEWDFKVIAERKCQNFNGGWITALDVPPFFRTTQMISNLAGMCEGLEEEEEIFDENCWTDEICFKVKGNDSGFIPTSCYVNHGKTYFPVRFVIGKGTGFEQAGGGLVSPRQSGKIVPQTPVAADMAEKRIPSPRSHVKSGEGRVGPGHGSKNGLRADNPIFNLEDNGIINSEAQSVVCNKLNKEGDGPAKIKDGQGPDLSQKMVSSTESLGLNLYDLEWDGVINQAEDFSIEEEAASDPSVVSYSEDESFLSTPAAKEIESINLNAMFSEEKSPTQLASPVQKEDNQIMPTEDLQRDSLALMVGVPQDVSTLGDPTQPLIKVNSDGIPIQVRSSSLDPSPSNSIERGGWMCAGGLSYPYPYSVALPLGEGKGEFLGFNHNLGHPVFLNTFQPSGSAFSYPSAYSIGERMPPFASFAGVPGSGIGGGVQPFPNGLVNNIPLPIYSLSDLEGLSGNHGFWQPGWAALASIGIREVPVDQTPTNHLIDDKDGKTPNNKTGDSKKVDRELRRLASSVNYDRRKTSKEGKDLGWVTGTYGPLRPKGRQEFWNELGDLFGLCGNNWCILEDFNVTRSPLEKASGGRVSKSMKFFNEWIEGCSLSLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCLLNSSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCLIGPFCCITCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQAGICAIIWGLWGERNNRTFRGFERDSSEVLSLVRYNTDIGEKVNVGNGKSEPSNVEAKLPQQKLEDWGVG

Homology

[Close]

BLAST of Spg016992 vs. NCBI nr
Match: TYK09969.1 (calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 6.1e-35
Identity = 79/188 (42.02%), Postives = 111/188 (59.04%), Query Frame = 0


Query: 627 SLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCLL 686
           S S+SFGF R+L+DR+T+++++L+SL+E  +F   RRD  +W+P P  GF C+SFF CL+
Sbjct: 168 SCSFSFGFRRALSDRETSNVVALISLLESHSFRLGRRDVTVWSPFPLEGFLCKSFFQCLV 227

Query: 687 NSSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCLIGPFCCITCRMAE 746
           NS+PT  S+ S++W++KVP+K   F WQV                              E
Sbjct: 228 NSTPTSESVSSLIWRIKVPRKFVLFSWQV------------------------------E 287

Query: 747 EDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQAGIC 806
           EDLDH+LW C     VWD F  +FGL +ARHR +R  +EEFL + P  E+  FLW A + 
Sbjct: 288 EDLDHLLWHCELVSCVWDDFLQTFGLSYARHRDVRGTVEEFLLNSPCGERGPFLWHACVH 325

Query: 807 AIIWGLWG 815
           A + G  G
Sbjct: 348 AHLVGFVG 325

[Close]

BLAST of Spg016992 vs. NCBI nr
Match: TYK29954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 1.5e-25
Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 663 RDFRLWNPNPSMGFSCRSFFHCLLNSSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNT 722
           R+  +W+ NPS GFS +S F  LL+ SPT   +F  +W++KV KKV+FF WQV+  R N 
Sbjct: 188 RNVHVWSANPSQGFSSKSLFSLLLDPSPTREFVFYAVWRIKVCKKVRFFTWQVLLDRANI 247

Query: 723 LDRLSRKIPCLIGPFCCITCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLRE 782
           +DRL R+        CCI CR A+EDLDH+LW C +AR VW  F   F ++ A  R +R+
Sbjct: 248 VDRLVRRGEPRWSSNCCILCRKAKEDLDHLLWDCQYARAVWGSFLQEFDVRLAGLRTVRK 307

Query: 783 MIEEFL 789
            IEEFL
Sbjct: 308 TIEEFL 313

[Close]

BLAST of Spg016992 vs. NCBI nr
Match: BBN67784.1 (VIRB2-interacting protein 2 [Prunus dulcis])

HSP 1 Score: 128.3 bits (321), Expect = 3.3e-25
Identity = 67/209 (32.06%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 626  LSLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCL 685
            L LS+ FGF R+L + + T++  LL L+E     TSR D R+W  +PS  F+C SF   +
Sbjct: 1439 LLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSHI 1498

Query: 686  LN-SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCL-IGPFCCITCR 745
             N     +   ++ +WK K P KV+ F+WQ +  ++NT D L R+ P L + P  C  C 
Sbjct: 1499 QNCGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCN 1558

Query: 746  MAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQA 805
            MA + ++H+L  C F+  +W+         +    G  E+    +      ++ + LW +
Sbjct: 1559 MAGDSVNHLLLHCPFSLKLWETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKVLWGS 1618

Query: 806  GICAIIWGLWGERNNRTFRGFERDSSEVL 833
             + A++W LW ERN R F  ++  S  V+
Sbjct: 1619 LMQAVVWNLWLERNRRIFEDYKSGSGRVM 1647

[Close]

BLAST of Spg016992 vs. NCBI nr
Match: VVA33204.1 (PREDICTED: ribonuclease H [Prunus dulcis])

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-24
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 0


Query: 628 LSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCLLN 687
           LS+ FGF R+L + + T+   LL L+E     TSR D R W  +PS  F+C S    + N
Sbjct: 86  LSWDFGFRRNLNELEITEAARLLDLLEGVRLITSRLDKRKWKLDPSGLFTCHSLCSHIQN 145

Query: 688 -SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCL-IGPFCCITCRMA 747
                + S ++ +WK K P KV+ F+WQ +  ++NT D L R+ P L I P  C  C  A
Sbjct: 146 CGEGEIFSPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 205

Query: 748 EEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQAGI 807
            E +DH+L RC F+  +W+         +    G  E+    +      ++ + LW + +
Sbjct: 206 GESVDHLLLRCPFSLKLWETLLKEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSLM 265

Query: 808 CAIIWGLWGERNNRTFRGFE 826
            A++W LW ERN R F  ++
Sbjct: 266 QAVVWNLWLERNRRIFEDYK 285

[Close]

BLAST of Spg016992 vs. NCBI nr
Match: RVX17758.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-24
Identity = 74/221 (33.48%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 623 GCSLSLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFF 682
           G SL LS++F F R+LTD +   L  L+S +     S S  D R+W+ + S  FS +SFF
Sbjct: 231 GNSLPLSWNFNFRRNLTDSEIDLLQRLMSSLNSVLLSPSSSDSRVWSLSSSSSFSVKSFF 290

Query: 683 HCLLN-SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPC-LIGPFCCI 742
           + L   S+P +      LW  KVP KV+   W V H +VNT D+L  + P   + P  CI
Sbjct: 291 YALSKVSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALYPQWCI 350

Query: 743 TCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFL 802
            C+   E +DH+   C     +W   F   G+ +   R L +M+           + + L
Sbjct: 351 LCKGHGESIDHLFLHCPITIGLWHRLFNLVGVIWVPPRSLEDMLVISFKGLGNSLRGKTL 410

Query: 803 WQAGICAIIWGLWGERNNRTFRGFERDSSEVLSLVRYNTDI 842
           WQ     +IW +W ERNNR F    R    V  L+R+ + +
Sbjct: 411 WQIACLTLIWMVWHERNNRIFEDKGRTEEMVWDLIRFYSSL 451

[Close]

BLAST of Spg016992 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-06
Identity = 45/165 (27.27%), Postives = 66/165 (40.00%), Query Frame = 0


Query: 660 TSRRDFRLWNPNPSMGFSCRSFFHCLLNSS---PTVSSIFSMLWKVKVPKKVQFFIWQVI 719
           T  RD   W  +    FS RS +  L       P ++S F+ LWKV+VP++V+ F+W V 
Sbjct: 249 TGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVG 308

Query: 720 HRRVNTLDRLSRKIPCLIGPFCCITCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQFAR 779
           ++ V T +   R+   L     C  C+   E + H+L  C     +W         Q   
Sbjct: 309 NQAVMTEEERHRR--HLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFF 368

Query: 780 HRGLREMIEEFLPHPPFREQRRFLWQAGICAIIWGLWGERNNRTF 822
            + L E + + L      E     W      IIW  W  R    F
Sbjct: 369 SKSLFEWLYDNLGDRSGCED--IPWSTIFAVIIWWGWKWRCGNIF 409

[Close]

BLAST of Spg016992 vs. ExPASy TrEMBL
Match: A0A5D3CI74 (Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00980 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-35
Identity = 79/188 (42.02%), Postives = 111/188 (59.04%), Query Frame = 0


Query: 627 SLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCLL 686
           S S+SFGF R+L+DR+T+++++L+SL+E  +F   RRD  +W+P P  GF C+SFF CL+
Sbjct: 168 SCSFSFGFRRALSDRETSNVVALISLLESHSFRLGRRDVTVWSPFPLEGFLCKSFFQCLV 227

Query: 687 NSSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCLIGPFCCITCRMAE 746
           NS+PT  S+ S++W++KVP+K   F WQV                              E
Sbjct: 228 NSTPTSESVSSLIWRIKVPRKFVLFSWQV------------------------------E 287

Query: 747 EDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQAGIC 806
           EDLDH+LW C     VWD F  +FGL +ARHR +R  +EEFL + P  E+  FLW A + 
Sbjct: 288 EDLDHLLWHCELVSCVWDDFLQTFGLSYARHRDVRGTVEEFLLNSPCGERGPFLWHACVH 325

Query: 807 AIIWGLWG 815
           A + G  G
Sbjct: 348 AHLVGFVG 325

[Close]

BLAST of Spg016992 vs. ExPASy TrEMBL
Match: A0A5D3E255 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00180 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.2e-26
Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 663 RDFRLWNPNPSMGFSCRSFFHCLLNSSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNT 722
           R+  +W+ NPS GFS +S F  LL+ SPT   +F  +W++KV KKV+FF WQV+  R N 
Sbjct: 188 RNVHVWSANPSQGFSSKSLFSLLLDPSPTREFVFYAVWRIKVCKKVRFFTWQVLLDRANI 247

Query: 723 LDRLSRKIPCLIGPFCCITCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLRE 782
           +DRL R+        CCI CR A+EDLDH+LW C +AR VW  F   F ++ A  R +R+
Sbjct: 248 VDRLVRRGEPRWSSNCCILCRKAKEDLDHLLWDCQYARAVWGSFLQEFDVRLAGLRTVRK 307

Query: 783 MIEEFL 789
            IEEFL
Sbjct: 308 TIEEFL 313

[Close]

BLAST of Spg016992 vs. ExPASy TrEMBL
Match: A0A5H2XKI7 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-25
Identity = 67/209 (32.06%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 626  LSLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCL 685
            L LS+ FGF R+L + + T++  LL L+E     TSR D R+W  +PS  F+C SF   +
Sbjct: 1439 LLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSHI 1498

Query: 686  LN-SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCL-IGPFCCITCR 745
             N     +   ++ +WK K P KV+ F+WQ +  ++NT D L R+ P L + P  C  C 
Sbjct: 1499 QNCGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCN 1558

Query: 746  MAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQA 805
            MA + ++H+L  C F+  +W+         +    G  E+    +      ++ + LW +
Sbjct: 1559 MAGDSVNHLLLHCPFSLKLWETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKVLWGS 1618

Query: 806  GICAIIWGLWGERNNRTFRGFERDSSEVL 833
             + A++W LW ERN R F  ++  S  V+
Sbjct: 1619 LMQAVVWNLWLERNRRIFEDYKSGSGRVM 1647

[Close]

BLAST of Spg016992 vs. ExPASy TrEMBL
Match: M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.1e-25
Identity = 68/201 (33.83%), Postives = 103/201 (51.24%), Query Frame = 0


Query: 627  SLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCLL 686
            SLS+ FGF R L + + T+   LL L+E     TSR D R W  +PS  F+C SF   + 
Sbjct: 1218 SLSWDFGFRRDLNELEITEAARLLDLLEGVRLITSRLDRRRWKLDPSGLFTCHSFCAHIQ 1277

Query: 687  N-SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCL-IGPFCCITCRM 746
            N     + S ++ +WK K P KV+ F+WQ +  ++NT D L R+ P L I P  C  C  
Sbjct: 1278 NCGEGEIFSPYTQIWKAKTPPKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNK 1337

Query: 747  AEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQAG 806
            A E +DH+L  C F+  +W+         +    G  E+    +      ++ + LW + 
Sbjct: 1338 AGESVDHLLLHCPFSLKLWEPLLKEVNTVWVIPEGCFELFSIRIDALGRGKKAKILWGSL 1397

Query: 807  ICAIIWGLWGERNNRTFRGFE 826
            + A++W LW ERN R F  ++
Sbjct: 1398 MQAVVWNLWLERNRRIFEDYK 1418

[Close]

BLAST of Spg016992 vs. ExPASy TrEMBL
Match: M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-14
Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 558 WVTGTYGPLRPKGRQEFWNELGDLFGLCGNNWCILEDFNVTRSPLEKASGGRVSKSMKFF 617
           W++G YG   P+ R+ FW EL  LFGLCGN WCI  DFNV R   EK++GGR++ SMK F
Sbjct: 387 WLSGIYGLCHPRDRRRFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKNF 446

Query: 618 NEWIEGCSL 627
           N++I+  +L
Sbjct: 447 NDFIDDTNL 455

HSP 2 Score: 124.4 bits (311), Expect = 2.3e-24
Identity = 65/202 (32.18%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 626 LSLSYSFGFARSLTDRDTTDLLSLLSLIEETTFSTSRRDFRLWNPNPSMGFSCRSFFHCL 685
           L LS+ FGF R+L + + T++  LL L+E     TSR D R+W  +PS  F+C SF   +
Sbjct: 665 LLLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSHI 724

Query: 686 LN-SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCL-IGPFCCITCR 745
            N     +   ++ +WK K P KV+ F+WQ +  ++NT D L R+ P L + P  C  C 
Sbjct: 725 QNCGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCN 784

Query: 746 MAEEDLDHILWRCSFARVVWDMFFVSFGLQFARHRGLREMIEEFLPHPPFREQRRFLWQA 805
           MA + ++H+L  C F+  +W+         +    G  E+    +      ++ + LW +
Sbjct: 785 MAGDSVNHLLLHCPFSLKLWETLLQEVNTVWVIPEGCFELFSIRIDALGRGKKAKVLWGS 844

Query: 806 GICAIIWGLWGERNNRTFRGFE 826
            + A++W LW ERN R F  ++
Sbjct: 845 LMQAVVWNLWLERNRRIFEDYK 866

[Close]

BLAST of Spg016992 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 7.2e-10
Identity = 38/150 (25.33%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 688 SSPTVSSIFSMLWKVKVPKKVQFFIWQVIHRRVNTLDRLSRKIPCLIGPFCCITCRMAEE 747
           S P+++ I+  +WK +   K+Q F+W+ +   +     L+ +   L     CI C   +E
Sbjct: 246 SEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYR--HLSKESACIRCPSCKE 305

Query: 748 DLDHILWRCSFARVVWDMFFVSFGL----QFARHRGLREMIEEFLPHPPFREQRRFL-WQ 807
            ++H+L++C+FAR+ W +  +   L      + +  L  +      +P + +  + + W 
Sbjct: 306 TVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPW- 365

Query: 808 AGICAIIWGLWGERNNRTFRGFERDSSEVL 833
                ++W LW  RN   FRG E ++ EVL
Sbjct: 366 -----LLWRLWKNRNELVFRGREFNAQEVL 387

[Close]

BLAST of Spg016992 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-04
Identity = 32/107 (29.91%), Postives = 49/107 (45.79%), Query Frame = 0


Query: 720 VNTLDRLSRKIPCL-----IGPFCCITCRMAEEDLDHILWRCSFARVVWDMFFVSFGLQF 779
           ++ LDRL  +   +     I P CC+ C  + E  DH++  C F+  +W+M      LQ 
Sbjct: 3   ISNLDRLPTRARLVSWGLQISPLCCL-CSQSVETRDHLILTCGFSSSIWNMVQARLRLQP 62

Query: 780 ARHR---GLREMIEEFLPHPPFREQRRFLWQAGICAIIWGLWGERNN 819
            + R    L   I+      P    R+ + QA +CAI    W +RNN
Sbjct: 63  VQFRVWESLLSWIKLSTASSP-SIIRKLVAQATVCAI----WKQRNN 103

The following BLAST results are available for this feature:

BLAST of Spg016992 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09969.1	6.1e-35	42.02	calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]	[more]
TYK29954.1	1.5e-25	48.41	reverse transcriptase [Cucumis melo var. makuwa]	[more]
BBN67784.1	3.3e-25	32.06	VIRB2-interacting protein 2 [Prunus dulcis]	[more]
VVA33204.1	2.2e-24	33.50	PREDICTED: ribonuclease H [Prunus dulcis]	[more]
RVX17758.1	3.7e-24	33.48	putative ribonuclease H protein [Vitis vinifera]	[more]

BLAST of Spg016992 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	8.0e-06	27.27	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg016992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CI74	2.9e-35	42.02	Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3E255	7.2e-26	48.41	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold58...	[more]
A0A5H2XKI7	1.6e-25	32.06	VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV...	[more]
M5XUF8	6.1e-25	33.83	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
M5XUF8	6.4e-14	53.62	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]

BLAST of Spg016992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	7.2e-10	25.33	Ribonuclease H-like superfamily protein	[more]
AT4G10613.1	2.0e-04	29.91	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 518..647 e-value: 2.1E-5 score: 26.4
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 676..763 e-value: 2.4E-15 score: 57.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 510..532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 848..872

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg016992.1	Spg016992.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003824	catalytic activity