Spg016828 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTTCGATGCTTCATTTCAATGGCGTAAAACCCAAAACCCTCGAGTTCACAGATTGTGTATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTTGACACTACGAAACCATCACTTCAGTTCATTGTCTACAAATCCCCTTGAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATACGTTCGAATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATTGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTCGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTGTACAGGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAAGAGGTTTGAGTTTAGCTATAAGTGTTGTCAATCTTGTGAATTCTCATTGTTAATGCGTTAATATTGATGTCTCTGTTTCGTTTTTGTGTAATTTTTCGAGAATTGGTGAGAGGTCACACGTCTGATGAACTGTATAGCTTTTAATTTTTTGCCACCAACGATTTCATCTATGAAGTGCCAGAATAAGAATTTGTAATTTTTTCGAGTGGAAGAATAAACCATATCTCACGTAGTTGAAGGGCAAACATTATTATTATTTTGAATTTCATGATTGTAGGTCATTTAATGGAAGTTTAGAAAATGACAATGTGAAACTACCGGTATAAGTAACTATGAACTAATCAAGTCCATTTTTTAGCTTGTGCATCGACATGGGGAAACTATCCTTGGTTCTAGTTTTGAGCTTTTTCAAAACGTACTCTTATGCATCTTGTGGAAATTAAGACGAAGAAGAAATTGAGGTCATTTGGTTGGTTTAAGAATGGAGTGCGTTGATATTGGTTTTGAAAATAAGAAACTGTTATTGGTTTCTATTGGCGTCAGATTACTCCAACTATATTTAGTATCACACCTTTAACAATCATAGTTTGAATCATTCTTAGATGCATTATTTTGATAGTTGGAGTATGAAAGCTATGAAAAAGTATTTCTGGTTCACTTTCAAAAGGACCATGGTTAAAATCAAAAGTTTTGATTTTCAATATGAATATAAGGAATAATGTGGCTGTTACTACCCTTAAGGCCTTAACCAAGGATTTTTTTTGGGTTGGCTGGTTTGTAGAAGTTGGTTGGTTCAGTCAGTTCTGTTTTTTTTTTTTTTTTGTTTTAATTGGTCCAATGATGATATTCATCTACCAATCTAAGTATAGTTCAACCGGTGTAAGCATGGGTTGAACCAACCTCTGCGAAAGGATATTCAGCTAGAAGTAATAAAGCAAACCTGACCTGAACCAACCTCTATGCCAATTGTACTGCTGACTGAACATACTCTTTCCCTCGCTGATGTCATGCATGTGTTTGTGTTTGCCTGCTGCTTGATAATTGCTTTGAACCTTTATGGAACTGATAATTCAAGATTGTACAATATTTTGATGTGTCAGGTTATCCAGTATAAGAGTACTCAAGTGTAATAAATTACAAATTCTAACATTCTGATTTTGAAGGAAATAATTTGTCTGTTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTATGAAGACTTCCCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCTGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGCAAAAGCTCAGTAAATATCACTTTCCTTCTTCTCTTACCATTTAAATATCTAGTAAAATCCTTTGGCTTTGTTTTCTTCCTTTTCAATTATCCGCAGGTTTGTCACAGATGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACAATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAATTATCGTCTCAATGATACAAGTTCTTCAGCAAAAGCCAAAATTTTTCCTTGAGTTGACCGACCCCATATTATCCAATGAGGAACCATTGGGTGCATCCAGCTTGTTTAGTTCATACAGCGTGGCGAGTTTGTAAGCAATGAAGTAGATTTTGGGTGCCTCATTTGCTTCAGTTTGTCACATTGACGTTGAACCTGAAATCCACTCGTATTATTATGTACCTAAACAGTTAAACTTTGCGTTCTTACAATTTTCTCACATTTAGGAATTGGTTTTAGTCAATCTAACCTTCTCGAACAGTTTCATCTGAAGGATTGGGAGAGGGCACGTAGTAACCATACCCTTCATCGAGCTTCCTAGAGAGAAAAAGGGGACATAATGTGTTCGCTAGTGGTCTCTGCACTTTGACTTCAGTTATCG ATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTTGACACTACGAAACCATCACTTCAGTTCATTGTCTACAAATCCCCTTGAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATACGTTCGAATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATTGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTCGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTGTACAGGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCTGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAGATGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACAATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAA ATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTTGACACTACGAAACCATCACTTCAGTTCATTGTCTACAAATCCCCTTGAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATACGTTCGAATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATTGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTCGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTGTACAGGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCTGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAGATGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACAATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAA MSRFRALHRQIDSLLTLRNHHFSSLSTNPLEFHSLPSTSRRSRTFSPKIEEGFGPEFIDEKKNIRSNLVVNEAARSNGSVQCREGKSRIEGRVDSKGREKLTREDASVRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGCDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHRCILRQSCKYVNQGVWNGGTNNLNLAAVMQVITQYALEAIPKQLVIPEDIKASVSRLLKEILRLSPTVSRN Homology
BLAST of Spg016828 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 456.4 bits (1173), Expect = 1.7e-124 Identity = 234/283 (82.69%), Postives = 251/283 (88.69%), Query Frame = 0
BLAST of Spg016828 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 456.4 bits (1173), Expect = 1.7e-124 Identity = 234/283 (82.69%), Postives = 251/283 (88.69%), Query Frame = 0
BLAST of Spg016828 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata]) HSP 1 Score: 454.1 bits (1167), Expect = 8.6e-124 Identity = 233/283 (82.33%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of Spg016828 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122 Identity = 230/283 (81.27%), Postives = 249/283 (87.99%), Query Frame = 0
BLAST of Spg016828 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima]) HSP 1 Score: 448.4 bits (1152), Expect = 4.7e-122 Identity = 230/283 (81.27%), Postives = 249/283 (87.99%), Query Frame = 0
BLAST of Spg016828 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 4.2e-124 Identity = 233/283 (82.33%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of Spg016828 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.3e-122 Identity = 230/283 (81.27%), Postives = 249/283 (87.99%), Query Frame = 0
BLAST of Spg016828 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.2e-108 Identity = 209/288 (72.57%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of Spg016828 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 4.8e-104 Identity = 209/288 (72.57%), Postives = 229/288 (79.51%), Query Frame = 0
BLAST of Spg016828 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 5.9e-78 Identity = 165/264 (62.50%), Postives = 184/264 (69.70%), Query Frame = 0
BLAST of Spg016828 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 188.7 bits (478), Expect = 6.3e-48 Identity = 100/221 (45.25%), Postives = 143/221 (64.71%), Query Frame = 0
BLAST of Spg016828 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-11 Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of Spg016828 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-09 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of Spg016828 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-09 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of Spg016828 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 56.2 bits (134), Expect = 4.9e-08 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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