Spg015470 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg015470
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 10383095 .. 10383950 (-)
RNA-Seq Expression	Spg015470
Synteny	Spg015470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGCTTCTCTTCAGTGGACATCAACGGGGTGTACAAGATTAAAGCACCCTTACATCCAAGAGGAAATGATGCCATCAGGAACCCCTCGGCCAAGCAGATGAAAGATGCACTGAAATTAGTGGCCAACAAGGGAGTTCAGTGGAAAGAATCCCAGACAAAGGTGAAGACACTAGTTCTAGGCGACCTAAAGCCTGAATCTACAGTATGGATTTTATAAAGAACCGATTGATGTCAAACACCCATGACAACACCATCTCAGTGGACAGAGTTATGCTCCTCTACTGTATTATGAAGGGGTTGGAGATTAACATCGGGAGCATTATCACGGAGGAAATTCTTGCATGTGCAAGGAAAAGAGTAGGAAAGCTTTTCTTTGGATCATTGATCACCCAGCTTTGTTAGAGGGTAAAGATAGTTCCTGGTAAGAACGAGGAGCATCACTTCTTCAAGCCTACCATCGACCTATCCTTGATCGGGAAGCTTCAACAGAATAGCATCCAAAGAAAAGACAAAGCCTCCACATCTCAAGCCACCCAACCATCAGGGCTGAACATGCCTTCTCCATCCTAGCACCTTTTTTAGGGCTCTCACCGTCATCTGAAGCCCTAGCAATTGCCTACCGACAGCTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATTCCAAGGAGAGGGATGAAGCCATTAGAGGGTTCTACCTCTTTATCACCCCGAGTATTGCTCCTGTCTTTCTCGATTTCCCTAAATCGCTGCTGCCTCAAGAAGACAAGGATTCAGATGAAGAAGATGAGGAAAATGATGAAGATGAAGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

mRNA sequence

ATGGTCAGCTTCTCTTCAGTGGACATCAACGGGGTGTACAAGATTAAAGCACCCTTACATCCAAGAGGAAATGATGCCATCAGGAACCCCTCGGCCAAGCAGATGAAAGATGCACTGAAATTAGTGGCCAACAAGGGAGTTCAGTGGAAAGAATCCCAGACAAAGGTGAAGACACTAGTTCTAGGCGACCTAAAGCCTGAATCTACAGGGTTGGAGATTAACATCGGGAGCATTATCACGGAGGAAATTCTTGCATGTGCAAGGAAAAGAGTAGGAAAGCTTTTCTTTGGATCATTGATCACCCAGCTTTGGCTCTCACCGTCATCTGAAGCCCTAGCAATTGCCTACCGACAGCTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATTCCAAGGAGAGGGATGAAGCCATTAGAGGGTTCTACCTCTTTATCACCCCGAGTATTGCTCCTGTCTTTCTCGATTTCCCTAAATCGCTGCTGCCTCAAGAAGACAAGGATTCAGATGAAGAAGATGAGGAAAATGATGAAGATGAAGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Coding sequence (CDS)

ATGGTCAGCTTCTCTTCAGTGGACATCAACGGGGTGTACAAGATTAAAGCACCCTTACATCCAAGAGGAAATGATGCCATCAGGAACCCCTCGGCCAAGCAGATGAAAGATGCACTGAAATTAGTGGCCAACAAGGGAGTTCAGTGGAAAGAATCCCAGACAAAGGTGAAGACACTAGTTCTAGGCGACCTAAAGCCTGAATCTACAGGGTTGGAGATTAACATCGGGAGCATTATCACGGAGGAAATTCTTGCATGTGCAAGGAAAAGAGTAGGAAAGCTTTTCTTTGGATCATTGATCACCCAGCTTTGGCTCTCACCGTCATCTGAAGCCCTAGCAATTGCCTACCGACAGCTGGATCAACTCAGGGACAACCTGAGGACTTATTGGGCATATTCCAAGGAGAGGGATGAAGCCATTAGAGGGTTCTACCTCTTTATCACCCCGAGTATTGCTCCTGTCTTTCTCGATTTCCCTAAATCGCTGCTGCCTCAAGAAGACAAGGATTCAGATGAAGAAGATGAGGAAAATGATGAAGATGAAGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Protein sequence

MVSFSSVDINGVYKIKAPLHPRGNDAIRNPSAKQMKDALKLVANKGVQWKESQTKVKTLVLGDLKPESTGLEINIGSIITEEILACARKRVGKLFFGSLITQLWLSPSSEALAIAYRQLDQLRDNLRTYWAYSKERDEAIRGFYLFITPSIAPVFLDFPKSLLPQEDKDSDEEDEENDEDEDEEKESSSDED

Homology

The following BLAST results are available for this feature:

BLAST of Spg015470 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015470 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015470 vs.


Match Name	E-value	Identity	Description

BLAST of Spg015470 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg015470.1	Spg015470.1	mRNA