Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATCAAGATTTGGGGTATCCATATATATATATTTTTTTATTACACCAAGATTTAGGTTGGAGGGATTCAAACTTCTGACCTCTTAATCAAAGATACATGTCAATTACTGCTGAAGTATGTTCACGGTAGACAGCTGATGTAATTTGACATAGTGATAGTGAGAACTTCACTTGTCCTAGACACTAGAGAGATATTTGAAATGCTTGAGGTGGATGTAAAAGATATTTTCCAATTCGTACAGAAAGCATAAGATTTAGAGCTCTCTCTCTCTGGTTCCAGTTTTCTTCTGAAGCAATTAGATAAAGCTCGAGATTATCTATGGAATCATCTGCAAGGATTCTTTCCCCTACTCAATTCCCTTCTCTTTTCCCACTACCCAATTCGAACAGAAGCAATTTGTCTCCAGTTTGGCCAAAAAAGCCGAAAGCCTCCAAGTCTATGCGCTTGCATTGCAATAAGATGTATGTCCCCGGTGGGTTCTATTTCTCTCTCTCTCTTTCTTTCTGTCTTTGTATTTGGGATACAAATTTTTTCATTTATGTTGAAATTTAGGGTTTGGAGAAGCGTCACCTGAAGCAAAGGCAGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTGACTGCGCAGCTTGAGGTCGCTCTTCAATTTCTTTGTTTTAATTGTTCTGTCATGTTGTGTGGATTTTCATTGGTATTCATTCTTGTTCTGGTAGAGCAGAGCTATAATCTAGAGGCGTACACAGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGGGAATCGTCGAGGCATAAGAGTCTTGGTAAAACCCAAATCTATTCTATTTCTGTAGCTTGGCCTAAATAAACAATATGAACTTGTTAGGGAACAACATGCACAAAAATAGATTCTTTAGGAATATACAGAAAGAGGAATGAAATGCATGATCTTCATTCCGGTGTTCTTCTTGGTTTCCTTGAGCCAAACCCTGTCATCAGCAAGGGAAGCCAAGTGTTAATAGATACTAATTTAGTCAAGAATGAAGAGAAATGAAGTTTATTGTTGATCAAGTTTCATGTTTGTGCTTTGACTCTCGTGTCCTGTTCTAACAATGAGCCTTCAAATCATGGTCTAACAAATGGCTGGGGCAGCATTGCGCATACTAGAGGTGAGTTCTGTACACTTGAGAGTTGATTAATGCTTCCCAGTGAAAAACACTCATAAGTAAGCAAATCACTGATTCCAGGTTCGATCTGCATACTGCAAAAACGATTTCGAATGGGACAACCTCAAGCGATTAGCTTTCAAAGTAAGAAAATTGGTCTCTTTCTCTAAAATTTTCCTAACAGCATCATGTTCAGTTGTTTGCTACCCCCTACTGAGATTCATTATTTTACAGATGGTTGATGAATCCAACACGAGACTGATGAGGGAATATGTCACAGAGACAAGTCCATCGGATACTGAGAAGTGACAAAATTCTGCACCTTCTTCTCTTTTTGCAGTTATATAGGAGAGGATATATAAATTCATTGTGTTTATAGTATGATATGAGAGAACATTGTGCAACTCAGCTTGTCAGGGCTTTATACCAAACAAAAATTGACGAGCCCAATAATAGAAATATATATAGAGACATTCATTCTGAATTCTTCTTGCGAGCAACAAAACAATACCTATCACGATTTAGATTACTCAAATGTTGCAAAGTTTTCAAAGTACTCACCCGTTGCCAAGTGATTAAGGACACCTCACCTCAAATTTCAGAAAATTGAATCAGCTCCAGTCTGAATCATTGTCTTGCGGTTTGCATGTAGATAAATAATACGGTAGACTATATAATATGCTTAAAAGAAACCAGAGGATCAATAAGAATCAAG
mRNA sequence
ATGGAATCATCTGCAAGGATTCTTTCCCCTACTCAATTCCCTTCTCTTTTCCCACTACCCAATTCGAACAGAAGCAATTTGTCTCCAGTTTGGCCAAAAAAGCCGAAAGCCTCCAAGTCTATGCGCTTGCATTGCAATAAGATGTATGTCCCCGGGTTTGGAGAAGCGTCACCTGAAGCAAAGGCAGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTGACTGCGCAGCTTGAGGTCGCTCTTCAATTTCTTTGTTTTAATTGTTCTGTCATGTTGTGTGGATTTTCATTGGTATTCATTCTTGTTCTGGTAGAGCAGAGCTATAATCTAGAGGCGTACACAGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGGGAATCGTCGAGGCATAAGAGTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTCGAATGGGACAACCTCAAGCGATTAGCTTTCAAAATGGTTGATGAATCCAACACGAGACTGATGAGGGAATATGTCACAGAGACAAGTCCATCGGATACTGAGAAGTGA
Coding sequence (CDS)
ATGGAATCATCTGCAAGGATTCTTTCCCCTACTCAATTCCCTTCTCTTTTCCCACTACCCAATTCGAACAGAAGCAATTTGTCTCCAGTTTGGCCAAAAAAGCCGAAAGCCTCCAAGTCTATGCGCTTGCATTGCAATAAGATGTATGTCCCCGGGTTTGGAGAAGCGTCACCTGAAGCAAAGGCAGCCAAAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATCGTGACTGCGCAGCTTGAGGTCGCTCTTCAATTTCTTTGTTTTAATTGTTCTGTCATGTTGTGTGGATTTTCATTGGTATTCATTCTTGTTCTGGTAGAGCAGAGCTATAATCTAGAGGCGTACACAGAGTTAATGGAGTTTCTTGATAGACATTCACTGAATGATGGGGACAAGTTCCTGGCCAGTTTGATGCGGGAATCGTCGAGGCATAAGAGTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTCGAATGGGACAACCTCAAGCGATTAGCTTTCAAAATGGTTGATGAATCCAACACGAGACTGATGAGGGAATATGTCACAGAGACAAGTCCATCGGATACTGAGAAGTGA
Protein sequence
MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVDESNTRLMREYVTETSPSDTEK
Homology
BLAST of Spg012099 vs. NCBI nr
Match:
KAG7026647.1 (Chaperonin-like RBCX protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 175/202 (86.63%), Postives = 181/202 (89.60%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MES ARILSPT FPSLFP PN NRSN +PVWPKK ASKS+RLHC+KMYVPGFGEASPEA
Sbjct: 1 MESCARILSPTHFPSLFPRPNLNRSNFNPVWPKKAGASKSLRLHCHKMYVPGFGEASPEA 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQ-FLCFNCSVMLCGFSLVFILVLVEQSYNLEAYT 120
KAAKNLHNFFTYVAVRIVTAQLEVALQ LCFNCS ML LV ILVLVEQSYN EA+
Sbjct: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQLLLCFNCSAML----LVLILVLVEQSYNPEAHA 120
Query: 121 ELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV 180
ELMEFLDRHSLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMV
Sbjct: 121 ELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMV 180
Query: 181 DESNTRLMREYVTETSPSDTEK 202
ESNTRLMREYVTETSP D EK
Sbjct: 181 GESNTRLMREYVTETSP-DAEK 197
BLAST of Spg012099 vs. NCBI nr
Match:
XP_038881664.1 (chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 306.2 bits (783), Expect = 2.1e-79
Identity = 161/201 (80.10%), Postives = 166/201 (82.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
ME SARILS TQFPSLFPLPN NRSN+ PVWPKKPKA+KSMRLHC+KMYVPGFGEASPE+
Sbjct: 1 MEPSARILSSTQFPSLFPLPNLNRSNVFPVWPKKPKATKSMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYQE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVS 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTRLMREYVTETSPSDTEK
Sbjct: 181 ESNTRLMREYVTETSPSDTEK 173
BLAST of Spg012099 vs. NCBI nr
Match:
XP_023003335.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima])
HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76
Identity = 157/201 (78.11%), Postives = 164/201 (81.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MES ARILSPT FPSLFPLPN NRSN +PVWPKKP+ASKS+RLHC+KMYVPGFGEASPEA
Sbjct: 1 MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEA 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAAKNLHNFFTYVAVRIVTAQLE SYN EA+TE
Sbjct: 61 KAAKNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAHTE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMV
Sbjct: 121 LMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVG 172
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTRLMREYVTETSP D EK
Sbjct: 181 ESNTRLMREYVTETSP-DAEK 172
BLAST of Spg012099 vs. NCBI nr
Match:
XP_008440039.1 (PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo] >TYK13022.1 chaperonin-like RBCX protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 295.0 bits (754), Expect = 4.7e-76
Identity = 156/201 (77.61%), Postives = 164/201 (81.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MESSARILSPTQFPS+F LPN NR N+ PV P KP+ASKSMRLHC+KMYVPGFGEASPE+
Sbjct: 1 MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYLE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVG 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTR+MREY+TETSPSDTEK
Sbjct: 181 ESNTRIMREYLTETSPSDTEK 173
BLAST of Spg012099 vs. NCBI nr
Match:
XP_004134778.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus])
HSP 1 Score: 290.8 bits (743), Expect = 9.0e-75
Identity = 154/201 (76.62%), Postives = 162/201 (80.60%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MESSARILSPTQFPSLF LPN NR N+ PV P KP+A K MRLHC+KMYVPGFGEASPE+
Sbjct: 1 MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYLE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVS 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTR+MREY+TETSPSDTEK
Sbjct: 181 ESNTRIMREYLTETSPSDTEK 173
BLAST of Spg012099 vs. ExPASy Swiss-Prot
Match:
Q94AU9 (Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX1 PE=1 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 7.9e-50
Identity = 114/192 (59.38%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 19 LPNSNRSNLSPVWPKKPKAS----------KSMRLHCNKMYVPGFGEASPEAKAAKNLHN 78
L +S S L+P + K+P S K R+ NKMYVPGFGEASPEAKAAK+LH+
Sbjct: 8 LHHSYLSYLNPKFGKRPLVSYPLMQSSRKCKQTRICSNKMYVPGFGEASPEAKAAKHLHD 67
Query: 79 FFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTELMEFLDRH 138
FFTYVAVRIV+AQLE SYN EAY EL EFLD +
Sbjct: 68 FFTYVAVRIVSAQLE----------------------------SYNPEAYMELREFLDTN 127
Query: 139 SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVDESNTRLMR 198
S++DGDKF A+LMR SSRH +LALRILEVRSAYCKNDFEWDN+KRLAFK VD+SNTRLMR
Sbjct: 128 SVSDGDKFCATLMRRSSRHMNLALRILEVRSAYCKNDFEWDNMKRLAFKNVDDSNTRLMR 171
Query: 199 EYVTETSPSDTE 201
EYV ETS +T+
Sbjct: 188 EYVLETSHVETD 171
BLAST of Spg012099 vs. ExPASy TrEMBL
Match:
A0A6J1KRH1 (chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496972 PE=4 SV=1)
HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 157/201 (78.11%), Postives = 164/201 (81.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MES ARILSPT FPSLFPLPN NRSN +PVWPKKP+ASKS+RLHC+KMYVPGFGEASPEA
Sbjct: 1 MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEA 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAAKNLHNFFTYVAVRIVTAQLE SYN EA+TE
Sbjct: 61 KAAKNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAHTE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMV
Sbjct: 121 LMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVG 172
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTRLMREYVTETSP D EK
Sbjct: 181 ESNTRLMREYVTETSP-DAEK 172
BLAST of Spg012099 vs. ExPASy TrEMBL
Match:
A0A5D3CNU4 (Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006230 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 156/201 (77.61%), Postives = 164/201 (81.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MESSARILSPTQFPS+F LPN NR N+ PV P KP+ASKSMRLHC+KMYVPGFGEASPE+
Sbjct: 1 MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYLE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVG 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTR+MREY+TETSPSDTEK
Sbjct: 181 ESNTRIMREYLTETSPSDTEK 173
BLAST of Spg012099 vs. ExPASy TrEMBL
Match:
A0A1S3B054 (uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=4 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 156/201 (77.61%), Postives = 164/201 (81.59%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MESSARILSPTQFPS+F LPN NR N+ PV P KP+ASKSMRLHC+KMYVPGFGEASPE+
Sbjct: 1 MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYLE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVG 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTR+MREY+TETSPSDTEK
Sbjct: 181 ESNTRIMREYLTETSPSDTEK 173
BLAST of Spg012099 vs. ExPASy TrEMBL
Match:
A0A0A0KMZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513450 PE=4 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 4.3e-75
Identity = 154/201 (76.62%), Postives = 162/201 (80.60%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MESSARILSPTQFPSLF LPN NR N+ PV P KP+A K MRLHC+KMYVPGFGEASPE+
Sbjct: 1 MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAA+NLHNFFTYVAVRIVTAQLE SYN EAY E
Sbjct: 61 KAARNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAYLE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV
Sbjct: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVS 173
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTR+MREY+TETSPSDTEK
Sbjct: 181 ESNTRIMREYLTETSPSDTEK 173
BLAST of Spg012099 vs. ExPASy TrEMBL
Match:
A0A6J1EFL9 (chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433874 PE=4 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 154/201 (76.62%), Postives = 161/201 (80.10%), Query Frame = 0
Query: 1 MESSARILSPTQFPSLFPLPNSNRSNLSPVWPKKPKASKSMRLHCNKMYVPGFGEASPEA 60
MES ARILSPT FPSLFP PN NRSN +PVWPKK +ASKS+RLHC+KMYVPGFGEASPEA
Sbjct: 1 MESCARILSPTHFPSLFPRPNLNRSNFNPVWPKKAEASKSLRLHCHKMYVPGFGEASPEA 60
Query: 61 KAAKNLHNFFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTE 120
KAAKNLHNFFTYVAVRIVTAQLE SYN EA+ E
Sbjct: 61 KAAKNLHNFFTYVAVRIVTAQLE----------------------------SYNPEAHAE 120
Query: 121 LMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVD 180
LMEFLDRHSLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMV
Sbjct: 121 LMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVG 172
Query: 181 ESNTRLMREYVTETSPSDTEK 202
ESNTRLMREYVTETSP D EK
Sbjct: 181 ESNTRLMREYVTETSP-DAEK 172
BLAST of Spg012099 vs. TAIR 10
Match:
AT4G04330.1 (Chaperonin-like RbcX protein )
HSP 1 Score: 198.4 bits (503), Expect = 5.6e-51
Identity = 114/192 (59.38%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 19 LPNSNRSNLSPVWPKKPKAS----------KSMRLHCNKMYVPGFGEASPEAKAAKNLHN 78
L +S S L+P + K+P S K R+ NKMYVPGFGEASPEAKAAK+LH+
Sbjct: 8 LHHSYLSYLNPKFGKRPLVSYPLMQSSRKCKQTRICSNKMYVPGFGEASPEAKAAKHLHD 67
Query: 79 FFTYVAVRIVTAQLEVALQFLCFNCSVMLCGFSLVFILVLVEQSYNLEAYTELMEFLDRH 138
FFTYVAVRIV+AQLE SYN EAY EL EFLD +
Sbjct: 68 FFTYVAVRIVSAQLE----------------------------SYNPEAYMELREFLDTN 127
Query: 139 SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVDESNTRLMR 198
S++DGDKF A+LMR SSRH +LALRILEVRSAYCKNDFEWDN+KRLAFK VD+SNTRLMR
Sbjct: 128 SVSDGDKFCATLMRRSSRHMNLALRILEVRSAYCKNDFEWDNMKRLAFKNVDDSNTRLMR 171
Query: 199 EYVTETSPSDTE 201
EYV ETS +T+
Sbjct: 188 EYVLETSHVETD 171
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7026647.1 | 1.9e-85 | 86.63 | Chaperonin-like RBCX protein 1, chloroplastic [Cucurbita argyrosperma subsp. arg... | [more] |
| XP_038881664.1 | 2.1e-79 | 80.10 | chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida] | [more] |
| XP_023003335.1 | 2.8e-76 | 78.11 | chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima] | [more] |
| XP_008440039.1 | 4.7e-76 | 77.61 | PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo] >TYK13022.1 chape... | [more] |
| XP_004134778.1 | 9.0e-75 | 76.62 | chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q94AU9 | 7.9e-50 | 59.38 | Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1KRH1 | 1.3e-76 | 78.11 | chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
| A0A5D3CNU4 | 2.3e-76 | 77.61 | Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
| A0A1S3B054 | 2.3e-76 | 77.61 | uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=... | [more] |
| A0A0A0KMZ4 | 4.3e-75 | 76.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513450 PE=4 SV=1 | [more] |
| A0A6J1EFL9 | 2.2e-74 | 76.62 | chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=L... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G04330.1 | 5.6e-51 | 59.38 | Chaperonin-like RbcX protein | [more] |
