Spg008580 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008580
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 34189155 .. 34190803 (+)
RNA-Seq Expression	Spg008580
Synteny	Spg008580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGCAAACGGTAATAATTATTATTTGGAAGAATAAAAAGTATAATAACACGCATTAAACTGTACAACAAAAAAATAAAAAAATAAAAATCTTTAAATAAACAAGTTAAAAAAAAAAAAAAAGCGTAACCGTCATGACCAAGTCTATTTAAAGAGCTCCCAGTTCACTTCTCAGAGCAGTCTGAATTCAAATTTGAAAGTTGAGTGGGCGAATTCCTTCTCTCGCAACGGAAAGAAAAATGTCTCTATTCAAATTGGAAAGTTGAGTCGCCGGATTCCGATGGTTCTCTGGCAACTGAAAGCAAAATCCGTTGATCGCAAGGTGATCACAAGGTTATTACATCGAAGCGACGGCCAAATCTAAAACCCTACAACTAGGGTTTTAGATTTTGTCGTTGCTTCGATGTAATTAGAACAAGAATTTCTGAAATCTCGCTCTCTGTTACCAATTGATTTTCATTCACCCTCGTTCTGTATTTGGATTCAAATCGTAACGATAGTTTGAAATTTAACGTACATTGGTTTCCATTTGAATTTAACATCATCGATGTGATTTCATGGCTTTACAGATCAGTCCAAGGAGTGCCCCATAAATTCATTGTTGTCGATAAATTAATGGTAAGCACTAGCCTCTGTAACGTTTTCAATTGTTCTCTGAATATTGTTTGCAGAGAGAGCTTCTTGTTGTCGTTGGTCAAGGTTCTATTTCCGATCTTTTGATGGCTGCTATGTGAATTGATTTTCTGATTTCTGAGGATCCCATTTCTTATGTCGTGGTTTTAGGGGTTTTTTAAAAATTAAACCTTAGCATTCTTATTGTGTTAAATGGCACCAGAGGTAAGCTAATTTTTGTTTTCCCCCAATGTTTTAGGTGTGGGCATTTGTAAGAAATTGGCACCAGAGGTAAACCAATTTTCTTATCTCTGCTGTTCATGTTCAATTATCAATCGTTTATTATAGCTTTGTTCAATCTTTTCCTGTTTTACAGTATGAAAAAGTTGCGTCTAAAATTGATAGGTTGAAGTATGTGAAATTCATCGTGGAGCCTGAACAGACGGATTGCTCCTTGGGTGAAGGATTACAAGGTCAAACTTTTTCTTTTCACATACTGTTTGTTTGCATGAGATAGTGCTCAAATTCTTGATTTTAAGCTTGAAATTTTGTAAACTCCATATGGTATCTTCATGGTTAATGTTTTGTTTATATTATATATGTTTGTGGTATTTTAAATTCCTTTCTTATTTTTTGATTTTTGAAACTCTTTACAGTAGTTTTTTCACTCTCATTTCATAATTAACAAATGTACCAACGTGAACATAACTCAACTAGCATAACGATGAGCCTGTAAAAGTGGGTTGTTGGATAAATCTTAGTATATTTATTTACTATGGCAGTTTTATTTTATTATTATTATTTTATTTCTGAAGAGTCTTTTTTTTTTTTTGTTAACCTCAAAATTTTTTTTAAAAAAAAACTAGTCTTTTTTGTTTTCTTTTATTTGTTTGTTTAAATTTTATTTTTTTAAAAAAAAAAATCTAATAAGAATTTTGACATTCATTTTGTTTTGTTATAGTATTTTTAGCTAACTTTCTCTTGTTGTATACTGCAAGATCATTAACTGGCTTTTCGGCAGTTTTACTGGAATTTTGA

mRNA sequence

ATGGTTCTCTGGCAACTGAAAGCAAAATCCGTTGATCGCAAGAGAGAGCTTCTTGTTGTCGTTGGTCAAGGTGTGGGCATTTGTAAGAAATTGGCACCAGAGTATGAAAAAGTTGCGTCTAAAATTGATAGGTTGAAGTATGTGAAATTCATCGTGGAGCCTGAACAGACGGATTGCTCCTTGGGTGAAGGATTACAAGTTTTACTGGAATTTTGA

Coding sequence (CDS)

ATGGTTCTCTGGCAACTGAAAGCAAAATCCGTTGATCGCAAGAGAGAGCTTCTTGTTGTCGTTGGTCAAGGTGTGGGCATTTGTAAGAAATTGGCACCAGAGTATGAAAAAGTTGCGTCTAAAATTGATAGGTTGAAGTATGTGAAATTCATCGTGGAGCCTGAACAGACGGATTGCTCCTTGGGTGAAGGATTACAAGTTTTACTGGAATTTTGA

Protein sequence

MVLWQLKAKSVDRKRELLVVVGQGVGICKKLAPEYEKVASKIDRLKYVKFIVEPEQTDCSLGEGLQVLLEF

Homology

The following BLAST results are available for this feature:

BLAST of Spg008580 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008580 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008580 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008580 vs.


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008580.1	Spg008580.1	mRNA