Spg008406 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008406
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold10: 36589985 .. 36591897 (+)
RNA-Seq Expression	Spg008406
Synteny	Spg008406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGTATGTCTCTCTTACTTTCTCCAAGTTCCACATTTTTCGGCTAATGTTTTGAACCTGCAGTTGGATTAGGCTTTTAATTTTTGTCACTCTAAGAAGTTTACTGTTTTAATTTTTTCCTAAGTAGTTATTGTCCAGAATTTAATTTGGTATAGGCATTTTATACACTGTTATAGCAGGATTCCTAGAAAAAACTGGAAGAAGCATTTTGTCAATCAAACCGTTCACAACTCAAGAATTAGTGTTTAAAATTCTGGAAGGGTTATTTCATCATACACCTTCTAAGTTCTAAGCAATGACTGTCTAAAATCTGGTATAGGCATTTCATCAAACAATTTCAAAGCAGTTACTCTTAAAAATCTTAATTAAACACTTTCTGAGCAATTACTGTCTAAAATCTGGTATAGACATTTCATCGAACATTTTCATAGCAGTTACTCTTAAAAATCTAGACGAGGCATTTCATCAAACACTTTCTGAGCAATTACTGTCTAAGATCTGATATAGGCATTTCATCGAACACTTTCAAAGCAGTTACTCTTAAAAATCTAGAAGAGGCATTTAATCAGACACTTTCTAAGCAATCACAGTTCAAAACTTTGGAAGAGGCATTTCATCAAACAGTTGATAAGCAATTACTTGTTCCATTTGCATAGACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAAAAAATTTGTTGATGTGAAGGTAAAATTGTTCATAATTTCACTAAAAAAAAGAACTTGGGATTGGGACTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGGTTTTGTTGGAGCCCTAAATCAAAATTCGAAATTGAGTGTGTGCCATTTCCAAGTTCTAAGTTTTTAGTTGCATGTATGGTTGAATTGGTTAAGATATATAGGATTGATAGGTAAGGCATTTCCAAATTAATAGAGATCTTTTTTGTTCAACAGTTATGAGATTTGGAGACCACTGTTGAGATGATAATTAGTGTCATTGAATTAAACAAGATTAAAACAATAATTGAATCATACAATTGAATGTATATATTTTATGACAAAATTAGAATGTGTATACATATGCATAGTAGTAATTGGCATATATTTTCAACCAAAAGGTCAAAGGTTCGAATCGTCCCCAAACTAAAAAATATATGTATATACACATAGGCTTGGTTTATTTTCC

mRNA sequence

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGTATGTCTCTCTTACTTTCTCCAAACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAA

Coding sequence (CDS)

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGCTAGCAGAACCCGGACCTTGCTTGCTGGACCCAGAGGCGGTGTCAATGTCGCCGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGGCGTTCGAGGGGGCGGCAACTTCGTCGACCCAGAATGGCTAGATGGCTCGTATGTCTCTCTTACTTTCTCCAAACTTCCAGGCGACTACGGCTTCGACCCTCTGGGGTTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGGCAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCCGATCCGAGCGCAGTCGCCCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCTTCTGCTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCGCAGTCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCGACGGGAGAACAGGGGTATCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTATTAAGGATGGGGTTTACATTGCGGACTCGGAGAAGTTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCCCTTGGATTGTAA

Protein sequence

MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Homology

[Close]

BLAST of Spg008406 vs. NCBI nr
Match: XP_008441527.1 (PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo] >KAA0054917.1 chlorophyll a-b binding protein CP24 10A [Cucumis melo var. makuwa] >TYK22706.1 chlorophyll a-b binding protein CP24 10A [Cucumis melo var. makuwa])

HSP 1 Score: 495.0 bits (1273), Expect = 4.1e-136
Identity = 240/263 (91.25%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. NCBI nr
Match: XP_022993917.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 240/263 (91.25%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALG+
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGV 255

[Close]

BLAST of Spg008406 vs. NCBI nr
Match: XP_022988907.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 238/263 (90.49%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGNF+DPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNFIDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IF+GQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. NCBI nr
Match: XP_004140973.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus] >KGN46151.1 hypothetical protein Csa_005752 [Cucumis sativus])

HSP 1 Score: 492.3 bits (1266), Expect = 2.7e-135
Identity = 240/263 (91.25%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRG
Sbjct: 1   MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. NCBI nr
Match: KAG7016421.1 (Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135
Identity = 239/263 (90.87%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D++KLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALG+
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGV 255

[Close]

BLAST of Spg008406 vs. ExPASy Swiss-Prot
Match: P27524 (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.8e-118
Identity = 208/264 (78.79%), Postives = 226/264 (85.61%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGG-VNVAGSRKLVIVAAAQPKKSWIPGVR 60
           MA TS AVLNGL S FL G ++++ LLA P    V  A + K   V AA  KKSWIP VR
Sbjct: 1   MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 61  GGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVV 120
           GGGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+
Sbjct: 61  GGGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVL 120

Query: 121 GIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEW 180
           GIFVGQAWSGIPWFEAGADP A+APFSFGTLLGTQL+LMGWVESKRWVDFF+P+SQSVEW
Sbjct: 121 GIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEW 180

Query: 181 ATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARI 240
           ATPWS+TAENFAN TGEQGYPGGKFFDPL  AG++ +GVY+ D+EKLERLK+AEIKHAR+
Sbjct: 181 ATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARL 240

Query: 241 AMLAMLIFYFEAGQGKTPLGALGL 264
           AMLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 AMLAMLIFYFEAGQGKTPLGALGL 256

[Close]

BLAST of Spg008406 vs. ExPASy Swiss-Prot
Match: P36494 (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.4e-115
Identity = 208/267 (77.90%), Postives = 229/267 (85.77%), Query Frame = 0


Query: 2   AATSG-AVLNGLGSPFLRGASRT--RTLLAGPRGGVNVA-GSRKLVIV-AAAQPKKSWIP 61
           AATS  A++NG  SPFL G  ++    L    + G  V+  SRKLV+V AAA PKKSWIP
Sbjct: 3   AATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIP 62

Query: 62  GVRGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA 121
            V+GGGNF+DPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM 
Sbjct: 63  AVKGGGNFLDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 122

Query: 122 AVVGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQS 181
           AV+GIFVGQAW+GIPWFEAGADP AVAPFSFGTLLGTQLLLMGWVESKRWVDFF+P+SQS
Sbjct: 123 AVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQS 182

Query: 182 VEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKH 241
           VEWATPWSRTAENF+N+TGEQGYPGGKFFDPL  AG+I +GVY  D++KLERLKLAEIKH
Sbjct: 183 VEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKH 242

Query: 242 ARIAMLAMLIFYFEAGQGKTPLGALGL 264
           AR+AMLAMLIFYFEAGQGKTPLGALGL
Sbjct: 243 ARLAMLAMLIFYFEAGQGKTPLGALGL 261

[Close]

BLAST of Spg008406 vs. ExPASy Swiss-Prot
Match: P27525 (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10B PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 3.0e-113
Identity = 201/265 (75.85%), Postives = 223/265 (84.15%), Query Frame = 0


Query: 1   MAATSG-AVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAA-QPKKSWIPGV 60
           M  TS  AVLNGL S FL G  +T+ LL G      V   ++ V+ AAA  PKKSWIP V
Sbjct: 1   MTTTSATAVLNGLSSSFLTGGKKTQALL-GAHVTARVTTPKRFVVAAAAVAPKKSWIPAV 60

Query: 61  RGGGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 120
           + GGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
Sbjct: 61  KSGGNLVDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 120

Query: 121 VGIFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVE 180
           +GIFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+ +SQS++
Sbjct: 121 LGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSID 180

Query: 181 WATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHAR 240
           WATPWS+TAENFAN TGEQGYPGGKFFDPL  AG++ +GVY+ D+EKLERLKLAEIKH+R
Sbjct: 181 WATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSR 240

Query: 241 IAMLAMLIFYFEAGQGKTPLGALGL 264
           +AMLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 LAMLAMLIFYFEAGQGKTPLGALGL 256

[Close]

BLAST of Spg008406 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-30
Identity = 89/252 (35.32%), Postives = 122/252 (48.41%), Query Frame = 0


Query: 5   SGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNF 64
           +G+++    + FL G     +    P G  +VA S     VAA   +  W PG       
Sbjct: 23  NGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVS----AVAADPDRPLWFPG------S 82

Query: 65  VDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 124
             PEWLDGS        LPGD+GFDPLGLG DP  LKW  +AEL+H RWAM    GIF+ 
Sbjct: 83  TPPEWLDGS--------LPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIP 142

Query: 125 QAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVE 184
           +  + I       W+ AG            TL   +L+L+GW E +RW D   P   + +
Sbjct: 143 EFLTKIGVLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTD 202

Query: 185 WATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHAR 244
              P      N    T + GYPGG +FDPLG+              K++ L+  EIK+ R
Sbjct: 203 PIFP-----NNKLTGT-DVGYPGGLWFDPLGWGS--------GSPAKIKELRTKEIKNGR 239

Query: 245 IAMLAMLIFYFE 251
           +AMLA++  +F+
Sbjct: 263 LAMLAVMGAWFQ 239

[Close]

BLAST of Spg008406 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 89/244 (36.48%), Postives = 115/244 (47.13%), Query Frame = 0


Query: 15  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGS 74
           P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS
Sbjct: 28  PHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLWFPGSS------PPEWLDGS 87

Query: 75  YVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW------ 134
                   LPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +        
Sbjct: 88  --------LPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFI 147

Query: 135 SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 194
               W++AG+           TL   Q++LMGW E +RW D   P S  +E   P     
Sbjct: 148 ENFSWYDAGSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP----- 207

Query: 195 ENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIF 252
            +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F
Sbjct: 208 -HKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGF 240

[Close]

BLAST of Spg008406 vs. ExPASy TrEMBL
Match: A0A5D3DGI0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00250 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 240/263 (91.25%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. ExPASy TrEMBL
Match: A0A1S3B4E4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485628 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 240/263 (91.25%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG+SRTRTLLAG RGGVNV  S KLV++AAAQPKKSWIPGVRG
Sbjct: 1   MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. ExPASy TrEMBL
Match: A0A6J1JU87 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489772 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.5e-136
Identity = 240/263 (91.25%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVLNGLGSPFLRG SRT+TLLAG RGGVNV GSRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG+IKDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALG+
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGV 255

[Close]

BLAST of Spg008406 vs. ExPASy TrEMBL
Match: A0A6J1JEC2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486120 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.8e-136
Identity = 238/263 (90.49%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGA+LNGLGSPFL G SRT+TLLAG RGGVNV  SRKLVIVAAAQPKKSWIP V+G
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGNF+DPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNFIDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IF+GQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYI D+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. ExPASy TrEMBL
Match: A0A0A0KEF5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G057170 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135
Identity = 240/263 (91.25%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRG 60
           MAATSGAVL GLGSPFLRG+SRTRTLLAG RG VNV  S KLVIVAAAQPKKSW+PGVRG
Sbjct: 1   MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRG 60

Query: 61  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120
           GGN VDPEWLDGS        LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG
Sbjct: 61  GGNLVDPEWLDGS--------LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 120

Query: 121 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180
           IFVGQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWA
Sbjct: 121 IFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 180

Query: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 240
           TPWSRTAENFANATGEQGYPGGKFFDPLGFAG++KDGVYIAD+EKLERLKLAEIKHARIA
Sbjct: 181 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIA 240

Query: 241 MLAMLIFYFEAGQGKTPLGALGL 264
           MLAMLIFYFEAGQGKTPLGALGL
Sbjct: 241 MLAMLIFYFEAGQGKTPLGALGL 255

[Close]

BLAST of Spg008406 vs. TAIR 10
Match: AT1G15820.1 (light harvesting complex photosystem II subunit 6 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-117
Identity = 205/263 (77.95%), Postives = 224/263 (85.17%), Query Frame = 0


Query: 3   ATSGAVLNGLGSPFLRGASRTRTLLAGPRG-GVNVAGSRKLVI-VAAAQPKKSWIPGVRG 62
           A SGAVL+GLGS FL G  R  T LA   G G    G + L++  AAAQPKKSWIP V+G
Sbjct: 4   AVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKG 63

Query: 63  GGNFVDPEWLDGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVG 122
           GGNF+DPEWLDGS        LPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+G
Sbjct: 64  GGNFLDPEWLDGS--------LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 123

Query: 123 IFVGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWA 182
           IFVGQAWSG+ WFEAGA P A+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWA
Sbjct: 124 IFVGQAWSGVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWA 183

Query: 183 TPWSRTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIA 242
           TPWS+TAENFAN TG+QGYPGG+FFDPLG AG  +DGVY  D EKLERLKLAEIKH+R+A
Sbjct: 184 TPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLA 243

Query: 243 MLAMLIFYFEAGQGKTPLGALGL 264
           M+AMLIFYFEAGQGKTPLGALGL
Sbjct: 244 MVAMLIFYFEAGQGKTPLGALGL 258

[Close]

BLAST of Spg008406 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 89/244 (36.48%), Postives = 115/244 (47.13%), Query Frame = 0


Query: 15  PFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKS-WIPGVRGGGNFVDPEWLDGS 74
           P +   S T   L   R  V  AG     +     P +  W PG         PEWLDGS
Sbjct: 28  PHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPPDRPLWFPGSS------PPEWLDGS 87

Query: 75  YVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW------ 134
                   LPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +        
Sbjct: 88  --------LPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFI 147

Query: 135 SGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTA 194
               W++AG+           TL   Q++LMGW E +RW D   P S  +E   P     
Sbjct: 148 ENFSWYDAGSREYFA---DSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP----- 207

Query: 195 ENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIF 252
            +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F
Sbjct: 208 -HKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGF 240

[Close]

BLAST of Spg008406 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-30
Identity = 84/237 (35.44%), Postives = 114/237 (48.10%), Query Frame = 0


Query: 32  GGVNVAGSRKLVIVAAAQPKKS------------WIPGVRGGGNFVDPEWLDGSYVSLTF 91
           GG  +   +KL + A ++P  S            W PG         PEWLDGS      
Sbjct: 21  GGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPG------STPPEWLDGS------ 80

Query: 92  SKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWF 151
             LPGD+GFDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  + I       W+
Sbjct: 81  --LPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY 140

Query: 152 EAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANA 211
            AG            TL   +L+L+GW E +RW D   P S + +   P      N    
Sbjct: 141 TAGEQEYFT---DKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFP-----NNKLTG 200

Query: 212 TGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAMLIFYFE 251
           T + GYPGG +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Sbjct: 201 T-DVGYPGGLWFDPLGWGS--------GSPAKLKELRTKEIKNGRLAMLAVMGAWFQ 226

[Close]

BLAST of Spg008406 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 93/247 (37.65%), Postives = 126/247 (51.01%), Query Frame = 0


Query: 11  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWL 70
           G+   FL       +++      V  AG    +    A  + +W+PG+        P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PPPYL 67

Query: 71  DGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWS 130
           DG+        L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +
Sbjct: 68  DGN--------LAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTT 127

Query: 131 GI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 190
           GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  + 
Sbjct: 128 GIRNLPVWYEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 187

Query: 191 RTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAM 250
             A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AM
Sbjct: 188 LEA---ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAM 224

Query: 251 LIFYFEA 252
           L F+ +A
Sbjct: 248 LGFFVQA 224

[Close]

BLAST of Spg008406 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 93/247 (37.65%), Postives = 126/247 (51.01%), Query Frame = 0


Query: 11  GLGSPFLRGASRTRTLLAGPRGGVNVAGSRKLVIVAAAQPKKSWIPGVRGGGNFVDPEWL 70
           G+   FL       +++      V  AG    +    A  + +W+PG+        P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLPGLN------PPPYL 67

Query: 71  DGSYVSLTFSKLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWS 130
           DG+        L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +
Sbjct: 68  DGN--------LAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTT 127

Query: 131 GI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 190
           GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  + 
Sbjct: 128 GIRNLPVWYEAGAVKFDFA--STKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 187

Query: 191 RTAENFANATGEQGYPGGKFFDPLGFAGSIKDGVYIADSEKLERLKLAEIKHARIAMLAM 250
             A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AM
Sbjct: 188 LEA---ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAM 224

Query: 251 LIFYFEA 252
           L F+ +A
Sbjct: 248 LGFFVQA 224

The following BLAST results are available for this feature:

BLAST of Spg008406 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441527.1	4.1e-136	91.25	PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo...	[more]
XP_022993917.1	1.6e-135	91.25	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_022988907.1	2.0e-135	90.49	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]
XP_004140973.1	2.7e-135	91.25	chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus] >KGN46...	[more]
KAG7016421.1	3.5e-135	90.87	Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma ...	[more]

BLAST of Spg008406 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27524	1.8e-118	78.79	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum ...	[more]
P36494	2.4e-115	77.90	Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562...	[more]
P27525	3.0e-113	75.85	Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum ...	[more]
P13869	2.4e-30	35.32	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q8LCQ4	2.0e-29	36.48	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Spg008406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGI0	2.0e-136	91.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B4E4	2.0e-136	91.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1JU87	7.5e-136	91.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JEC2	9.8e-136	90.49	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KEF5	1.3e-135	91.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Spg008406 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15820.1	2.0e-117	77.95	light harvesting complex photosystem II subunit 6	[more]
AT1G19150.1	1.4e-30	36.48	photosystem I light harvesting complex gene 6	[more]
AT3G61470.1	3.2e-30	35.44	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	1.6e-29	37.65	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.6e-29	37.65	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..251 e-value: 9.7E-46 score: 156.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 67..262 e-value: 2.4E-50 score: 173.1
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..263
None	No IPR available	PANTHER	PTHR21649:SF107	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 2..263
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 66..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008406.1	Spg008406.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding