Spg008057 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008057
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein RRP6-like 3 isoform X1
Locationscaffold4: 6709280 .. 6718357 (-)
RNA-Seq ExpressionSpg008057
SyntenySpg008057
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGTTTCAATACGACACCGTTCTGGGACGGCGTAAACATCCTGTCCGGAGTCGAAACCGTCGCCGCCGTATGAGAAATCGAAGCTCCAAATCAGAGAAACACAGGCAAAAGAACGAAAACGGAGGCCATTGATTCGGATGGAGCTTCAACACAAGGTCAAAATCGCTCTAGTCGTAGCGTCTTTTGCAGCTCTAACAATCTTATTTACAGCCAGACGCCGCCGGAAGCAAAGGAGAGTTCGTAGTTCGTGTTATTTACGAGATGATCAGAAGCCTCAGTACGCATTTAAACGCGTCTTGGCTGACAATTCTTATTCTGCGTTCAAGCACTTTAAGCTCAATATGAATACAGGTATAACTTTGTTCGTTACTCTATTTCAAATATGATATTGTTTTTAGCTGCTGAGACTGTGTTGTTATTAGTAGCTTATGGAGTTTTTAATCGAGGAACGATGTGATAAGGAGCTATAATTGATGTTGTTAGTTGCATTTAGCATTGTTTGTTTGGGAAAAAGATGGTTTAATTGCTTCTTTAAGCTGAATAATTTTTGTGGAGCAACAGGATGTAGGGAAATGGAAATCTGGAAGATTTCTATTCTTTTTTAAAACTTAATAGTTAGCGAAAAGTTGAGTCATATCATAGGTGTTTGAAAGTTACGTATTCTTCATCAATGGATATCGTTTGTTTTCTCTTCAATCTTTAAGCAGCATTTTTATAAAAGATTTTGCAATGGTGGTTCTCATGTTCTTTTAAGGAGGTTGACTGAGTGAAGGGAGTTTTTTCTTGCAGACAACGATGTAAACGCTCATCCCTACGAGTCAGAAATACTATCATTGTTGGAAAATTCTTTGCCTGAATTTGATTTTATTAGTGAAAGAAAAGATTTTACTTTGAGTGACGCTTATGTTTGGGTTGAGAACGAGTCCCAATTGGAAGAACTCGTGGATGTGTTAAATAAAGAAACGGTGTTTGCTGTTGATACCGAGCAGCACAGTCTAAGATCCTTTCTGGGTTTCACTGCTTTAGTACAGGTAAATTTATTTTCTCTATCCCTCTCTCTCTGTCACTCTCAAAGGAGCTTTAGTATACGTAAGTTGATGAGTCTTTCCGTGCAATCCCCGTCTCTTTAATTGTCACGATCATTTTCTGTCCTTTTATTTTGTTTGAAGCAGATTTCTACAGACAAGGAAGATTATTTGGTTGACACTATAGCTCTACATGATTCAATGAATCTTCTTCGTCCTGTCTTTGCCAATAGTCGTATTTGCAAGGTATCAAAATATATGCTTCGGTTATGGTTTAAAGGCTTGATTTAGACAAGCTTGGTATCTAAATTGAAAGCAAGAAATGTTTCAGAACACCATCAATTTGGTATTGATGAGATAAGTAGAGCAGTTACATCTGGGGGAATTCCATTGATCTTCTTCTTTGGATTAATATTTTATTTGGTATTAGAAAACTTGTTGGTTAATGAATGCAAGGTTCCAATTAAATTAGTTTTTGTGTTTAGGTGTTTCACGGTGCTGATAATGACATTCTCTGGCTTCAAAGGGACTTCCATATATATGTAGTCAATTTATTTGACACTGCAAAGGTGAGAATTTGCTGTTCAAAGGAGAGGAACTTTGTTTGGGGGTGGGGTGTGGAATTGAAACTTTTCACTTCTCATGTGTGAACGAGTGAGAGGTCGTTTTTGCCTGTTTTCATCTTGTGCTTGCTGTTATAATGTAGGCTTGCGAAGTGCTGTCAAAACCTCAGAAGTCACTGGCCTACTTACTTGAAACTTATTGTGGGGTAGCTACGAACAAAATGTTACAGGTTGGACATCTTGTCTTAAAATATACTGATGTAGTATGAGAATCAACATCTTGACCATCAGATTTCAGATATAAGATAATCACTATTATCTAGTTAAAGTAGTGGTAGCAGGTATTTGATTTTGAAATATTAATTTGCCTGATCATACATGTAAGAATTTATGAAACAAGCATTTTATAACACGTCTATCGTCGTGTTGTATTCTATTTGAAGGTAGTAACATTGCACTAGTTGCATGTTTAACTGCCCAAGATTACCATAGAGCATATTTCAATGATCAGTAAATTAACAAAACCTATTTTATTTTTAGCTTCAACTTAAATAAGGCGAGGATTGATTCATACCCTATGGCCTTTCTTGTTGTAAATACAACAACCTTTTTGGTCTTGCTTATTTGTGATTACTCATTAATGGTCAGCGAGAAGACTGGAGACAACGACCCCTATCAGCAGATATGGTGCAGTATGCTAGGACAGATGCCCACTATCTCCTATATATTGCAAACTGTTTGCTTTCTGAGCTGAAACAGGTTGATGGTATGTCTTGGATCTTGCGTTTGTGTTTGCTGCCATTCACTTTCTATAACTAGTTTACATGTAAATGTTGAGAAAATAACAGTGGATAGAAGATGAACATGAGGATATCAATAGATAAGGAAGCAAATAGGGACGCATTCGAGTAGTGTACTAAAATTTTTTGTTAGTTCAACATTGTGCAATTTGCATAATAAACTCAATGATGAAAATATTACCCTTGATATTTTGTTAACATTAATGTCTTAATATTGGCAAGAACCATATTTCTCTTCCATCTTGTGAAAATGTGTAAATTTTTAATTCAAAAATGGTTTTAGAAATTTATTCATATCTGTTCTTTTTATAGTATGTTAGACAAAGTGTAGAGTTAAGATGAAGGTTGTATAATTTATTTGAGTGGCTTTAAAATTTAATTTATTAATTCATTTTTTTTTTATAAACTTAATGATTTTTGTATTATTCAGGATTGTTCTTTGACACTCAACATCTGTGTTGATACTTCCATAAATTTGAGATCTTGATATTTTGGTTGACGTTGATGCTTACTTCTTGCTTATGCTTGTACTATTCCCATTTCTCATGTCATGACTTTGACATTGTCATCTTTGATTACTCCAAACATTCGGGAACATTTTTAATTTCCTTGTGTAGCCTCAGTTTTAGGCCAGAGACAGTAATTAACAATTATAGTTGGTTACCTTCAAATTATATATCCTTCCATATCATCAGATATCTAAGTGCATTAATGTATCAGAAAACTCTTCCACCGATGATAAATTCAATTTTCTTCTCGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTCTATGCAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATCTTCTCGTAACTTAAACAGTCAATTAGTTTCCTGTAAAACTCAGGTAAGCTGCTTTCTTGACAACTTTGATGTTATATCATTTGAAGTAGTAGCACAATTCAATTTAGGATATTCTATCACCCGAGTTTGAACTTTCAGTTTCAGGATCATGTGAGGAGAATATGTGCTTGGCGAGACTTAATGGTCAGTAAATTATATATAAAAAAAAAAAAATCAAGAACATAATTGGTCATTCTCTAAGGTTTTAATATTTATTTTACTGTTATTTTTTCCCAATTTGTTCTTATTCCATCGAACATTTTATGTCTAAGGGGGTTTGGTGCTTTCTACTTGAGATGGAACCATTTTGGTACTTAGTAATAGCTTGTGCTAATTCTTAATAAGATGGAAGGTAGGGGTTGGTTCACTGAGTGCCTTAAGACTACTTCAAGATGCCCCTGGAATTTCATTGATAAATGTAAATATTTGATGGGGAAGCATTTCATTTCAAAGTTGGTATAACGGTATGGTCGAAGAAGTCTTCCTTTGTGGGACTGTAACCTTCCAGATGATGGGACAGAAGATTGGATCTCTGTGATGAACTCCTTGAAAGTTGAATCATTATACTGTAGTGAGGTTCAAAATTTTATTTTATGAACTTTTCAATAACACAACTTTTTGGAGCATCCAACATAGCTTGTTTTGTAACTATGTCATTGATTCGATCCATTTAAATTGGAAGGTTTTTTTTGTAATCCTTCTTTAGGGAGAAGGGATGCCTTATCCCTTTGTTCGCTAGGTTGTTTTGTATTGTGTTGGCTCGGTGCCTCCATCAATGATATTATCGTTTCTTATAAAAAAATATATATATTTTATGAAGATTGGATGCTTGTGTACTTGGCATGTCGTTCTATAGTCATCTTACATAGAAAGCAAATCTTTTTCCTATATGGGTGACTAGAGTTGTAAGGAGGAATACATGTCCCAAAAAGTAGAAATCTTTATTTGGTTTCTAGTTCTGAAATACCACTGACATGATTTGAAAAAGAAACTATCTCAATTGCCTCCTTTCAAGTTGGCTAAAAATTAGATATCATGAAGGTCAGACTTGCCTTGTCATTTCATTGTGCAACCTGACACATTACCCCCTATCTCCTCGTTCCTTCTGCTTATAAGGGCCATAATAAGTAAAGTAAATCAACTATAATTGTTGCTTTAAAAGGAATCTCTTAGTGATAGTACAAGCATGTAATCATATTAGCAATCTTTAGCTTGTCTTTCTCAGATATTCTTTCATTAGCAGAATGACAAAACTTCCATTATGGCTGCTTACCTGAATCTGAGATTGTCATTTCATTTCAGGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCAACTCAAGTGTCAAAAAATACGATGGGATTATATGCAACTATCGCACAAGCTGATTTGAATGTGGATTTGAGTCCGAGTTTGCTTCTTCCATCTCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTCCTCCGTGACAAGTCTGGCGACCTTGATAATATTTTTTTGGGGATCTTACAGAACTGCATCGGTTCTAATGGCAGTTGCCCCCTTTCTATATTTAATTATGCACTATTGGTTAAGTATAATCTAAAAATGATGGCAATATCTAAACAAAATTATAGAAAGAATGCAAAGCAAATATCCAAAAAAGCTTCAAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGACGCTTGCTGTGCTACTGTGATCGGCGAAAACTTGAATGGTTGGTTAGCATCTCATAGTTTCATTTAAGTATAAATGTAACTGGTAATACTAATGTGTTTGACACCAAGCAACTATCTTTATATTTAAACAGGTACTTGCGCCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGCTTCTTTTTGAACCTAAAGGTCGTCCAGAGGATGAGGGCAATGACTTCTATATCCAGAGTAAAAAAAATATATGTGTTGGCTGTGGTGAAGGAAACCATTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACACTTTCCTGAGCATTTAAAAAGTCATCGTTCTCATGATATTGTCCTACTCTGTGTGGACTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAGATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACTAAGGAGGCCTTTGATTTAGTTGAGACGTCTGACTCCGGAACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTGAGAACAGCTGCTATGGCCCTATTGCGGCATGGACCAAGGATGCCATCAAAACGTCAAGAGGAACTCATGCTTGTATGCGATATATACTTTGCAATTGAGATAGTCATTGTATATGTGTCTATGTGTGTCCATGTGTTTTATAAGTAAGCATGCAGTTCAATGCTTGAGATATTAATAATCGACATGGGTCATCTGCTATCCCAGCCATTTAAAAGATCTTTGGTTTCATGATATCAAATGCATAGCGCCTAATCATTTAATAGAGTTCCATCTTGGTAGAAATGTATCATTTAAGATTTTCATGATGCTATAGGATTAAATTTATCAATTATCATCAATTGTAGTAATCAGCAATCAGCATGTTTTCATATTCTTCTATCAGTAGTTTGAGACATGAAAAAGGTCCTGAATATTCATTATTCATTAGTATGCTGTTGGAATTGGCCATTTGAAAACGCTTTTTAGTTATGTAATCCCCATTCTTATATCTTTAGTAACTCTGTAATTGTCAAGTATCAACTTCTGAAATTCTTATTATATCTTTTCCTCGCCTCTGTTTTCTTTGTTGTGTTTTCAGGTTGTCATGAGATACTATGGGCGGAGTGAGATATCTGAAGAGGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGGCGACTTCAGAAGAAAAGGGGTATAGCTTTGAAGCACTCAGCACAGCGTATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGCAGCACTGACACATTGACCGTGGCCAATTCATCCATTGGTATGTGTGGAGTAGTTGACTTTTTGCTGATACATTCATTTTGCAAACAACAAAATGTTATTCATAGAGGGTGGAAAGTAAGTACTTCAAGCGGCCATTCGTTCTAATTTAAGGCTTGATTATGATGCCAATGCAGATGTTAACAATCACATGAACTCAGATAGTGGTAGCGTGTCTGAAACATGTCTGCCTGGTGGAGAGGTCAGCTTTTCTGATAATGGCTCCGCTAGAACTGCTCAACCGAAATTCAATCCAAAATTATCACTCTTGGGACATGGACCACACGGTAAACAAGTTGTGGATCATCTACTGAGGGAATATGGTGAGGATGGCATACGACAGTTTTGTCAAAGGTGGAGACAAGTGTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGGTAAACTGAATTACCTAACTTAATTTAATCTCTAAACTTCAAAATGGGAGAGCTCATATGGACGTCTCTTTTATGCTAACGTTTCCTGTCTTATCTAAAGAAACGATTATCATTTCCTACCATGTACATCTATCATTTTACTATTCCAGTCCCAATTACACTTTAAAGATTCCGGGTCTTTGACTTTATTGTTCTCACTATTACATAGTGATCTTCTCATCAAGGTATCATAGCATCGCCATACTTCCTGATGGTCACCTTATTTAAGGAATTATTGGTAAAAGTTCAAAGATTCGTTATCATTGAGTTAACAACTCTTGAAACACAGCATCGATATTCAATATAGAAAGTGGGAATGTAGTTGCAAATCTTCTCTCATACACTGCCTTCATATTTGACGATGATGATAATAAAGATGAAAAAAGAAAACGAAAGTTTTTGAGATTTGATAAAGGAGACGTGGTTTTTATCCTGTTGTTACTTTATCTTTAGGGAAATCAAGTTCATATCATAAGATGCTCTAATTAACCTCGTTTCTTGCCTTGTTTGTCTTGACATCTTGTTTGGTGATAGGTTCCATAGACTTGCTTGCAGATCTATATCTAGGCTAATCATCATTTGAGCTCCTTTGACCATGGAAACCAATGACCATACAATATGAATACGCACAACTCTGGTTTTATTTTTTATAATTGCCAATACTTCAAAACATCTCTAGACTGCATCTTTAATAAACATTGATATAAATTTCATCGCACTGTTGACTGAGCATGAGAAGGTGGAGATGATTGTTGTGAATGATTTTTCCTGTTGCTTAATCTCTGAAATTGTGTTGTTATGTTAAGATTGTTATTAGTGGAATGGTCTGATTTATGGACACTGAAATTTTTCAACTTTATTCCAGTGGTAGAAGGGACTTTGGCGAATTCAGTGTGTACAATCCTATAAAGAAGCCTTCCCCTGCTATTGAGTAGAACAATTCGAAGCACTGCAACAATGCCCATGTTGCATGTAAGGCCATATCATTCCATGCTAGGAATTAGCAGATTATATTCCGCTTCATTTCCACAAGTAAAATCTCTCAATTTCAATGTCACACGTTTTGTTTTTAATTTCTCTGCGCTGAGGAAGTTAAACTATTCAATTTTGTGCAGATATCTTTTGTATATTAAGATTAGGATGGCGGCCTTGTCTTTGTCCCCATCTTGTGAGCCTTTCATCTCTCTTGTACCTTATTGACTTCATACTTGGCTTAGGATCTTTTTGACTAAGTATTCTTAAATTGTTTAACATAGCTTAGGGGATATAATTTGCAATGGAAAGAAATTGCAGTAGAGCTTTAGCTACAATTTAAATGGAATTCAGTACTGAAGTCACTTCCAGGTAAACTATCGGCCTCTTGTTTTTCAATTATGTGGTTAAAATGAGATGAATAGTCAAAATGGTCTCTAATCTTTTAAATATTTTTTAACTTGCTCTTTATAACCTATTGAGAATTAAAAATCGTCAATTAAGTCATTCCATACACAAATATGTCAAAATTTATTAACATAAAAATGTATAATCAAATTATTTTTAGGGCAGGTAGGATTTTGTGTGTCCAATAGTATTTGAGTGGTATGTTCACACATTCAAATATGTTAATAAAAATAATAATTCAATGATAAATTAAGGATCAAGAATAAAAACTATTTAGAAACTTTTATTTCTGTTCTAAGCAAATGCAGAGTGTTATCTGTCATATTGGATAATACACGACGTTTAACCTTGTGTATTTGTTAATCTTCACTTTACAAAAACATCTTAACCATGTGAAAAAGCAAAAAACATATATTTAGAAATTGCCTTTTCTACGTACAAATTTTAGTTACGATTCTAAATATACTTTGAAAAGTAGATTAGATTACAAAGAACTCATTGGTAAGCGTATTCAACTTTTAAAAATTAAAAAAAAAAAAAAAAAAAATCTGTATCTAACGTGGATCTTATACCTAATCAATCAACATCGTGTAAATTGGTAAATATCAAAAAGCTTGACATTAAGAAAGCTTTGTTAAGACAATATTTTCTTGGAAAATAACATTCTAACAAACTTATGTGTTTATGGTGGAATTTACTTTAATCTTCTAATAACAATTGCAGGGCTTAGCAATACTTGTTGAATTTCAATTTGTAGGAGCAACAGCTTAACAATCATCAGGTAAAGTATCTCTGCCAATCATGTGTTGTAACTGTAAGAGATGGAGATTTTTTGCCTTTTTTTTT

mRNA sequence

ATGGAGCTTCAACACAAGGTCAAAATCGCTCTAGTCGTAGCGTCTTTTGCAGCTCTAACAATCTTATTTACAGCCAGACGCCGCCGGAAGCAAAGGAGAGTTCGTAGTTCGTGTTATTTACGAGATGATCAGAAGCCTCAGTACGCATTTAAACGCGTCTTGGCTGACAATTCTTATTCTGCGTTCAAGCACTTTAAGCTCAATATGAATACAGACAACGATGTAAACGCTCATCCCTACGAGTCAGAAATACTATCATTGTTGGAAAATTCTTTGCCTGAATTTGATTTTATTAGTGAAAGAAAAGATTTTACTTTGAGTGACGCTTATGTTTGGGTTGAGAACGAGTCCCAATTGGAAGAACTCGTGGATGTGTTAAATAAAGAAACGGTGTTTGCTGTTGATACCGAGCAGCACAGTCTAAGATCCTTTCTGGGTTTCACTGCTTTAGTACAGATTTCTACAGACAAGGAAGATTATTTGGTTGACACTATAGCTCTACATGATTCAATGAATCTTCTTCGTCCTGTCTTTGCCAATAGTCGTATTTGCAAGGTGTTTCACGGTGCTGATAATGACATTCTCTGGCTTCAAAGGGACTTCCATATATATGTAGTCAATTTATTTGACACTGCAAAGGCTTGCGAAGTGCTGTCAAAACCTCAGAAGTCACTGGCCTACTTACTTGAAACTTATTGTGGGGTAGCTACGAACAAAATGTTACAGCGAGAAGACTGGAGACAACGACCCCTATCAGCAGATATGGTGCAGTATGCTAGGACAGATGCCCACTATCTCCTATATATTGCAAACTGTTTGCTTTCTGAGCTGAAACAGGTTGATGAAAACTCTTCCACCGATGATAAATTCAATTTTCTTCTCGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTCTATGCAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATCTTCTCGTAACTTAAACAGTCAATTAGTTTCCTGTAAAACTCAGGATATTCTATCACCCGAGTTTGAACTTTCAGTTTCAGGATCATGTGAGGAGAATATGTGCTTGGCGAGACTTAATGGTCAATGGAAGGTAGGGGTTGGTTCACTGAGTGCCTTAAGACTACTTCAAGATGCCCCTGGAATTTCATTGATAAATGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCAACTCAAGTGTCAAAAAATACGATGGGATTATATGCAACTATCGCACAAGCTGATTTGAATGTGGATTTGAGTCCGAGTTTGCTTCTTCCATCTCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTCCTCCGTGACAAGTCTGGCGACCTTGATAATATTTTTTTGGGGATCTTACAGAACTGCATCGGTTCTAATGGCAGTTGCCCCCTTTCTATATTTAATTATGCACTATTGGTTAAGTATAATCTAAAAATGATGGCAATATCTAAACAAAATTATAGAAAGAATGCAAAGCAAATATCCAAAAAAGCTTCAAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGACGCTTGCTGTGCTACTGTGATCGGCGAAAACTTGAATGGTACTTGCGCCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGCTTCTTTTTGAACCTAAAGGTCGTCCAGAGGATGAGGGCAATGACTTCTATATCCAGAGTAAAAAAAATATATGTGTTGGCTGTGGTGAAGGAAACCATTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACACTTTCCTGAGCATTTAAAAAGTCATCGTTCTCATGATATTGTCCTACTCTGTGTGGACTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAGATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACTAAGGAGGCCTTTGATTTAGTTGAGACGTCTGACTCCGGAACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTGAGAACAGCTGCTATGGCCCTATTGCGGCATGGACCAAGGATGCCATCAAAACGTCAAGAGGAACTCATGCTTGTTGTCATGAGATACTATGGGCGGAGTGAGATATCTGAAGAGGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGGCGACTTCAGAAGAAAAGGGGTATAGCTTTGAAGCACTCAGCACAGCGTATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGCAGCACTGACACATTGACCGTGGCCAATTCATCCATTGATGTTAACAATCACATGAACTCAGATAGTGGTAGCGTGTCTGAAACATGTCTGCCTGGTGGAGAGGTCAGCTTTTCTGATAATGGCTCCGCTAGAACTGCTCAACCGAAATTCAATCCAAAATTATCACTCTTGGGACATGGACCACACGGTAAACAAGTTGTGGATCATCTACTGAGGGAATATGGTGAGGATGGCATACGACAGTTTTGTCAAAGGTGGAGACAAGTGTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGTGGTAGAAGGGACTTTGGCGAATTCAGTGTGTACAATCCTATAAAGAAGCCTTCCCCTGCTATTGAGTAG

Coding sequence (CDS)

ATGGAGCTTCAACACAAGGTCAAAATCGCTCTAGTCGTAGCGTCTTTTGCAGCTCTAACAATCTTATTTACAGCCAGACGCCGCCGGAAGCAAAGGAGAGTTCGTAGTTCGTGTTATTTACGAGATGATCAGAAGCCTCAGTACGCATTTAAACGCGTCTTGGCTGACAATTCTTATTCTGCGTTCAAGCACTTTAAGCTCAATATGAATACAGACAACGATGTAAACGCTCATCCCTACGAGTCAGAAATACTATCATTGTTGGAAAATTCTTTGCCTGAATTTGATTTTATTAGTGAAAGAAAAGATTTTACTTTGAGTGACGCTTATGTTTGGGTTGAGAACGAGTCCCAATTGGAAGAACTCGTGGATGTGTTAAATAAAGAAACGGTGTTTGCTGTTGATACCGAGCAGCACAGTCTAAGATCCTTTCTGGGTTTCACTGCTTTAGTACAGATTTCTACAGACAAGGAAGATTATTTGGTTGACACTATAGCTCTACATGATTCAATGAATCTTCTTCGTCCTGTCTTTGCCAATAGTCGTATTTGCAAGGTGTTTCACGGTGCTGATAATGACATTCTCTGGCTTCAAAGGGACTTCCATATATATGTAGTCAATTTATTTGACACTGCAAAGGCTTGCGAAGTGCTGTCAAAACCTCAGAAGTCACTGGCCTACTTACTTGAAACTTATTGTGGGGTAGCTACGAACAAAATGTTACAGCGAGAAGACTGGAGACAACGACCCCTATCAGCAGATATGGTGCAGTATGCTAGGACAGATGCCCACTATCTCCTATATATTGCAAACTGTTTGCTTTCTGAGCTGAAACAGGTTGATGAAAACTCTTCCACCGATGATAAATTCAATTTTCTTCTCGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTCTATGCAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATCTTCTCGTAACTTAAACAGTCAATTAGTTTCCTGTAAAACTCAGGATATTCTATCACCCGAGTTTGAACTTTCAGTTTCAGGATCATGTGAGGAGAATATGTGCTTGGCGAGACTTAATGGTCAATGGAAGGTAGGGGTTGGTTCACTGAGTGCCTTAAGACTACTTCAAGATGCCCCTGGAATTTCATTGATAAATGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCAACTCAAGTGTCAAAAAATACGATGGGATTATATGCAACTATCGCACAAGCTGATTTGAATGTGGATTTGAGTCCGAGTTTGCTTCTTCCATCTCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTCCTCCGTGACAAGTCTGGCGACCTTGATAATATTTTTTTGGGGATCTTACAGAACTGCATCGGTTCTAATGGCAGTTGCCCCCTTTCTATATTTAATTATGCACTATTGGTTAAGTATAATCTAAAAATGATGGCAATATCTAAACAAAATTATAGAAAGAATGCAAAGCAAATATCCAAAAAAGCTTCAAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGACGCTTGCTGTGCTACTGTGATCGGCGAAAACTTGAATGGTACTTGCGCCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGCTTCTTTTTGAACCTAAAGGTCGTCCAGAGGATGAGGGCAATGACTTCTATATCCAGAGTAAAAAAAATATATGTGTTGGCTGTGGTGAAGGAAACCATTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACACTTTCCTGAGCATTTAAAAAGTCATCGTTCTCATGATATTGTCCTACTCTGTGTGGACTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAGATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACTAAGGAGGCCTTTGATTTAGTTGAGACGTCTGACTCCGGAACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTGAGAACAGCTGCTATGGCCCTATTGCGGCATGGACCAAGGATGCCATCAAAACGTCAAGAGGAACTCATGCTTGTTGTCATGAGATACTATGGGCGGAGTGAGATATCTGAAGAGGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGGCGACTTCAGAAGAAAAGGGGTATAGCTTTGAAGCACTCAGCACAGCGTATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGCAGCACTGACACATTGACCGTGGCCAATTCATCCATTGATGTTAACAATCACATGAACTCAGATAGTGGTAGCGTGTCTGAAACATGTCTGCCTGGTGGAGAGGTCAGCTTTTCTGATAATGGCTCCGCTAGAACTGCTCAACCGAAATTCAATCCAAAATTATCACTCTTGGGACATGGACCACACGGTAAACAAGTTGTGGATCATCTACTGAGGGAATATGGTGAGGATGGCATACGACAGTTTTGTCAAAGGTGGAGACAAGTGTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGTGGTAGAAGGGACTTTGGCGAATTCAGTGTGTACAATCCTATAAAGAAGCCTTCCCCTGCTATTGAGTAG

Protein sequence

MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYSAFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYVWVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTMGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLAAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQNGACSTDTLTVANSSIDVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSVYNPIKKPSPAIE
Homology
BLAST of Spg008057 vs. NCBI nr
Match: XP_022135803.1 (protein RRP6-like 3 isoform X1 [Momordica charantia])

HSP 1 Score: 1573.9 bits (4074), Expect = 0.0e+00
Identity = 795/917 (86.70%), Postives = 829/917 (90.40%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLR-DDQKPQYAFKRVLADNSY 60
           MEL+HKVKI L VASFAALTILFTARRRRKQ+ VRSSCYLR DDQK QY FKRVLADNSY
Sbjct: 1   MELKHKVKIVLAVASFAALTILFTARRRRKQKSVRSSCYLRGDDQKXQYTFKRVLADNSY 60

Query: 61  SAFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYVWVENESQL 120
           S FKH KLNMNTDNDVN+HPYESEILSLLENS PE+DF+SERKDFT SDAYVWVE ESQL
Sbjct: 61  SVFKHLKLNMNTDNDVNSHPYESEILSLLENSFPEYDFVSERKDFTSSDAYVWVETESQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTAL+QIST KEDYLVD IALHDSMNLLRP+FA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTRKEDYLVDAIALHDSMNLLRPIFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACE+LSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACELLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWRQRPLSA+MVQYARTDAHYLL+IANCLLSELKQV+ENSSTDDKFNFLLEASRR
Sbjct: 241 MLQREDWRQRPLSAEMVQYARTDAHYLLHIANCLLSELKQVNENSSTDDKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQ----LVSCKTQDILSPEFELSVSGSCE 360
           SNMICLQLYAKETEGSPGESAASSISSR LNSQ    ++SCKTQ      F+  V   C 
Sbjct: 301 SNMICLQLYAKETEGSPGESAASSISSRRLNSQGVSTIISCKTQ------FQDLVRRLC- 360

Query: 361 ENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVS 420
                      W+                    + ARVHDESLRYVLSDQAIVALA +V 
Sbjct: 361 ----------AWRD-------------------LMARVHDESLRYVLSDQAIVALANKVP 420

Query: 421 KNTMGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQN 480
           KNTM LYATIAQADL+VDLSPSL LPSPSPVVCSHLDDLHCLL DKSGDLDNIFL ILQN
Sbjct: 421 KNTMELYATIAQADLHVDLSPSLFLPSPSPVVCSHLDDLHCLLHDKSGDLDNIFLVILQN 480

Query: 481 CIGSNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVY 540
           CIGS+GSCPLSIFNYALLVKYNLKMM ISK N+RKNAKQISKKASRELFVQKFSCKSPVY
Sbjct: 481 CIGSDGSCPLSIFNYALLVKYNLKMMTISKHNHRKNAKQISKKASRELFVQKFSCKSPVY 540

Query: 541 HNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ 600
           HNCRIYANDGRLLCYCDRRKLEWY+RRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ
Sbjct: 541 HNCRIYANDGRLLCYCDRRKLEWYVRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ 600

Query: 601 SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHK 660
           SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE+AHAAAEKHK
Sbjct: 601 SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKHK 660

Query: 661 RDLAAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMP 720
           R+LAAEFGIPLFVRRVVDTKEAF+L E SDSGTNFQEEGVSPLELRTAAMALLRHGPRMP
Sbjct: 661 RELAAEFGIPLFVRRVVDTKEAFNLAEPSDSGTNFQEEGVSPLELRTAAMALLRHGPRMP 720

Query: 721 SKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDA 780
           SKRQEELML VMRYYGR EISEEDLE+ALLVGMSPHERRRLQKKRGIALKHSAQ  FP+A
Sbjct: 721 SKRQEELMLTVMRYYGRREISEEDLERALLVGMSPHERRRLQKKRGIALKHSAQSNFPNA 780

Query: 781 EHQNGACSTDTLTVANSSIDVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNPK 840
           EHQNGAC  DT T  NSS+D+N+H NSDSGSVS+ CLPGG+V FSDNGSARTAQPKFNPK
Sbjct: 781 EHQNGACDIDTSTAVNSSVDINSHTNSDSGSVSDKCLPGGQVGFSDNGSARTAQPKFNPK 840

Query: 841 LSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDF 900
           LSLLGHGPHGKQVVDHLLREYGE+GIRQFCQRWRQVFVAA +PRFLPAGWDVNHSGRRDF
Sbjct: 841 LSLLGHGPHGKQVVDHLLREYGEEGIRQFCQRWRQVFVAATKPRFLPAGWDVNHSGRRDF 881

Query: 901 GEFSVYNPIKKPSPAIE 913
           GEFSVYNPIKK SP+ E
Sbjct: 901 GEFSVYNPIKKASPSNE 881

BLAST of Spg008057 vs. NCBI nr
Match: XP_038887745.1 (protein RRP6-like 3 [Benincasa hispida] >XP_038887746.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887747.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887748.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887749.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887750.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887751.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887752.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887753.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887754.1 protein RRP6-like 3 [Benincasa hispida])

HSP 1 Score: 1559.3 bits (4036), Expect = 0.0e+00
Identity = 790/916 (86.24%), Postives = 825/916 (90.07%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MELQHK+KIALVVASFAALTILFTA RRRK+R VR+SCYLRDDQKPQYAFK VLADNSYS
Sbjct: 1   MELQHKLKIALVVASFAALTILFTAGRRRKRRSVRTSCYLRDDQKPQYAFKCVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYVWVENESQLE 120
            FKH KLN N D DVN+HPYESEILSLLENS PEFDFISER D TLSD YVWVE ESQLE
Sbjct: 61  QFKHLKLNPNKDLDVNSHPYESEILSLLENSKPEFDFISERTDLTLSDTYVWVETESQLE 120

Query: 121 ELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFAN 180
           EL+DVLNKETVFAVDTEQHSLRSFLGFTAL+QIST KEDYLVDTIALHDSM+LLRP+FAN
Sbjct: 121 ELLDVLNKETVFAVDTEQHSLRSFLGFTALIQISTPKEDYLVDTIALHDSMSLLRPIFAN 180

Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM 240
           SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM
Sbjct: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM 240

Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRRS 300
           LQREDWRQRPL ADMVQYARTDAHYLLYIANCLLSELKQV+EN+STDDKFNFLLEASRRS
Sbjct: 241 LQREDWRQRPLPADMVQYARTDAHYLLYIANCLLSELKQVNENTSTDDKFNFLLEASRRS 300

Query: 301 NMICLQLYAKETEGSPGESAASSISSRNLNSQ----LVSCKTQDILSPEFELSVSGSCEE 360
           NM CLQLY+KETEGSPGESAASSISSR+LNSQ    LVSCKTQ      F+  V   C  
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSMLVSCKTQ------FQDHVRRLC-- 360

Query: 361 NMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSK 420
                     W+                    + ARVHDE+LRYVLSDQAIVALA QVSK
Sbjct: 361 ---------AWRD-------------------LMARVHDENLRYVLSDQAIVALANQVSK 420

Query: 421 NTMGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNC 480
           NT  LYATIAQADLNVDLS SL LPSPSPVVCSHLDD+HCLL DKSGDLD+IFLGILQNC
Sbjct: 421 NTGELYATIAQADLNVDLSSSLYLPSPSPVVCSHLDDIHCLLHDKSGDLDDIFLGILQNC 480

Query: 481 IGSNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYH 540
           IGSNGSCPLSIFNYALLVKYNLKMM ISKQ+ RKNAKQISKKASRELFVQKFSCKSPVYH
Sbjct: 481 IGSNGSCPLSIFNYALLVKYNLKMMTISKQSDRKNAKQISKKASRELFVQKFSCKSPVYH 540

Query: 541 NCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQS 600
           NCRIYANDGRLLCYCDRRKLEWYLRRELAEL+ DDPPAIKLLFEPKGRPEDEGNDFYIQS
Sbjct: 541 NCRIYANDGRLLCYCDRRKLEWYLRRELAELIADDPPAIKLLFEPKGRPEDEGNDFYIQS 600

Query: 601 KKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR 660
           KKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE AHAAAEKHKR
Sbjct: 601 KKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKR 660

Query: 661 DLAAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPS 720
           +LAAEFGIPLFVRRVVDTKEAFD+ E SDSGT+ QEEGVSPLELRTAAMALLRHGPRMPS
Sbjct: 661 ELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTDVQEEGVSPLELRTAAMALLRHGPRMPS 720

Query: 721 KRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAE 780
           KRQEELML+VMRYYGR EISEEDLEKALLVGMSPHE+RRLQKK+G+ALKHSAQ +FP AE
Sbjct: 721 KRQEELMLIVMRYYGRREISEEDLEKALLVGMSPHEKRRLQKKKGLALKHSAQSVFPAAE 780

Query: 781 HQNGACSTDTLTVANSSIDVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNPKL 840
           HQNG C+ DT TV NSS+DV NHMN+DSGSVSETCLPGGEVSFSD+G A+T QPKFNPKL
Sbjct: 781 HQNGGCNIDTSTVVNSSVDVKNHMNADSGSVSETCLPGGEVSFSDDGYAKTVQPKFNPKL 840

Query: 841 SLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFG 900
           SLLGHGPHGK VVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSG+RDFG
Sbjct: 841 SLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGKRDFG 880

Query: 901 EFSVYNPIKKPSPAIE 913
           EFS+YNPIKK S A E
Sbjct: 901 EFSLYNPIKKASLANE 880

BLAST of Spg008057 vs. NCBI nr
Match: XP_023531760.1 (protein RRP6-like 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1558.5 bits (4034), Expect = 0.0e+00
Identity = 796/917 (86.80%), Postives = 825/917 (89.97%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MEL  K KIALVVAS AALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELHRKAKIALVVASLAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN++PYESEILSLLENS  EFDFI SER DFTLSD Y+WVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSYPYESEILSLLENSSSEFDFISSERNDFTLSDTYIWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWRQRPLS +MV+YARTDAHYLL+IANCLLSELKQV+ENSSTD KFNFLLEASRR
Sbjct: 241 MLQREDWRQRPLSEEMVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMC 360
           SNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C     
Sbjct: 301 SNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC----- 360

Query: 361 LARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTM 420
                  W+                    + ARVHDESLRYVLSDQAIVALATQ+SKNT 
Sbjct: 361 ------AWRD-------------------LMARVHDESLRYVLSDQAIVALATQMSKNTR 420

Query: 421 GLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480
            LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLR+KSGDLDNIFLGILQNCIGS
Sbjct: 421 ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLREKSGDLDNIFLGILQNCIGS 480

Query: 481 NGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCR 540
           NGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNCR
Sbjct: 481 NGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCR 540

Query: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKN 600
           IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKKN
Sbjct: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKN 600

Query: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660
           ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA
Sbjct: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660

Query: 661 AEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQ 720
           AEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KRQ
Sbjct: 661 AEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQ 720

Query: 721 EELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQN 780
           EELMLVVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQN
Sbjct: 721 EELMLVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQN 780

Query: 781 GACSTDTLTVANSSI----DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNPK 840
           GACS D+ T+ NSSI    DVNNH+NSD+G+V ETCLP GEV  SDNGSA TAQPKFNPK
Sbjct: 781 GACSIDSSTMTNSSIDADPDVNNHLNSDNGTVPETCLPCGEVKVSDNGSAITAQPKFNPK 840

Query: 841 LSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDF 900
           LSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSG+RDF
Sbjct: 841 LSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGKRDF 881

Query: 901 GEFSVYNPIKKPSPAIE 913
           GEFSVYN IK+ SP IE
Sbjct: 901 GEFSVYNSIKQLSPTIE 881

BLAST of Spg008057 vs. NCBI nr
Match: XP_023531755.1 (protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531756.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531758.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531759.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 796/919 (86.62%), Postives = 825/919 (89.77%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MEL  K KIALVVAS AALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELHRKAKIALVVASLAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN++PYESEILSLLENS  EFDFI SER DFTLSD Y+WVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSYPYESEILSLLENSSSEFDFISSERNDFTLSDTYIWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWRQRPLS +MV+YARTDAHYLL+IANCLLSELKQV+ENSSTD KFNFLLEASRR
Sbjct: 241 MLQREDWRQRPLSEEMVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMC 360
           SNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C     
Sbjct: 301 SNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC----- 360

Query: 361 LARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTM 420
                  W+                    + ARVHDESLRYVLSDQAIVALATQ+SKNT 
Sbjct: 361 ------AWRD-------------------LMARVHDESLRYVLSDQAIVALATQMSKNTR 420

Query: 421 GLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480
            LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLR+KSGDLDNIFLGILQNCIGS
Sbjct: 421 ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLREKSGDLDNIFLGILQNCIGS 480

Query: 481 NGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCR 540
           NGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNCR
Sbjct: 481 NGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCR 540

Query: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKN 600
           IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKKN
Sbjct: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKN 600

Query: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660
           ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA
Sbjct: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660

Query: 661 AEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQ 720
           AEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KRQ
Sbjct: 661 AEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQ 720

Query: 721 EELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQN 780
           EELMLVVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQN
Sbjct: 721 EELMLVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQN 780

Query: 781 GACSTDTLTVANSSI------DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFN 840
           GACS D+ T+ NSSI      DVNNH+NSD+G+V ETCLP GEV  SDNGSA TAQPKFN
Sbjct: 781 GACSIDSSTMTNSSIDADADPDVNNHLNSDNGTVPETCLPCGEVKVSDNGSAITAQPKFN 840

Query: 841 PKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 900
           PKLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSG+R
Sbjct: 841 PKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGKR 883

Query: 901 DFGEFSVYNPIKKPSPAIE 913
           DFGEFSVYN IK+ SP IE
Sbjct: 901 DFGEFSVYNSIKQLSPTIE 883

BLAST of Spg008057 vs. NCBI nr
Match: XP_022930823.1 (protein RRP6-like 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1554.3 bits (4023), Expect = 0.0e+00
Identity = 798/919 (86.83%), Postives = 821/919 (89.34%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MEL  K KIALVVAS AALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELHRKDKIALVVASLAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN+HPYESEILSLLENS  EFDFI SER DFTLSD YVWVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSHPYESEILSLLENSSSEFDFISSERNDFTLSDTYVWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWR RPLS DMV+YARTDAHYLL+IANCLLSELKQV+ENSSTD KFNFLLEASRR
Sbjct: 241 MLQREDWRLRPLSEDMVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMC 360
           SNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C     
Sbjct: 301 SNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC----- 360

Query: 361 LARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTM 420
                  W+                    + ARVHDESLRYVLSDQAI+ALATQ+SKNT 
Sbjct: 361 ------AWRD-------------------LMARVHDESLRYVLSDQAIIALATQMSKNTR 420

Query: 421 GLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480
            LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS
Sbjct: 421 ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480

Query: 481 NGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCR 540
           NGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNCR
Sbjct: 481 NGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCR 540

Query: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKN 600
           IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKKN
Sbjct: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKN 600

Query: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660
           ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR+LA
Sbjct: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNLA 660

Query: 661 AEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQ 720
           AEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KRQ
Sbjct: 661 AEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQ 720

Query: 721 EELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQN 780
           EELM VVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQN
Sbjct: 721 EELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQN 780

Query: 781 GACSTDTLTVANSSI------DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFN 840
           GACS D+ TV NSSI      DVNNHMNSD+G+V ETCLP GEV  SDNGSA TAQPKFN
Sbjct: 781 GACSIDSSTVTNSSIDADADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSAITAQPKFN 840

Query: 841 PKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 900
            KLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR
Sbjct: 841 SKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 883

Query: 901 DFGEFSVYNPIKKPSPAIE 913
           DFGEFSVYN IKK SP IE
Sbjct: 901 DFGEFSVYNSIKKLSPTIE 883

BLAST of Spg008057 vs. ExPASy Swiss-Prot
Match: A9LLI8 (Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1)

HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 569/933 (60.99%), Postives = 695/933 (74.49%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILF-TARRRRKQRRVR----SSCYLRDDQKPQYAFKRVLA 60
           MEL+ K K+ + VAS  A+TILF T  RRR+QRR +    SSCYL  + KPQ+ FKRVLA
Sbjct: 1   MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60

Query: 61  DNSYSAFKHFKL----NMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYV 120
           DNSYS FKH KL    + + +   N HPYE+EI  LLEN   EF F+       +SD+YV
Sbjct: 61  DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120

Query: 121 WVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM 180
           WVE ESQL+EL ++L KE VFAVDTEQHSLRSFLGFTAL+QIST +ED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180

Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
           ++LRPVF++  ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240

Query: 241 YCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQV--DENSSTDDK 300
            CGVATNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L +ELKQ+  +++SS DD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATEDSSSPDDR 300

Query: 301 FNFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELS 360
           F+FLLEASRRSNM CLQLY KETE  PG +A+SSI  R+LN                + +
Sbjct: 301 FHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGH------------GDKSN 360

Query: 361 VSGSCEENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVA 420
           +S + EE   L R    W+  +G                   R+HDES RYVLSDQAIV 
Sbjct: 361 ISLNAEE---LVRKLCAWRDLMG-------------------RIHDESTRYVLSDQAIVG 420

Query: 421 LATQVSKNTMGLYATIAQADLNVDLSPSL--LLPSPSPVVCSHLDDLHCLLRDKSGDLDN 480
           L+ +    T  +Y TIA  DL  + SPSL   + SP PV+CSHLDD++ ++ DK   LD+
Sbjct: 421 LSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAKLDD 480

Query: 481 IFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMAIS--KQNYRKNAK-QISKKASRELF 540
           +   +L+ C+G+NG+CP+S+FNY+LLV +  K+ + S  KQN  KN K Q ++KASRELF
Sbjct: 481 LLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASRELF 540

Query: 541 VQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGR 600
           V+KFSCK+PVYHNCRIYANDGRLLCYCD+RKLEWYL R LA+LV+++PPAI LLFEPKGR
Sbjct: 541 VKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEWYLNRGLAKLVEENPPAIMLLFEPKGR 600

Query: 601 PEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCH 660
           PEDEGNDFYIQ+K+NICVGCGEG HYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCVDCH
Sbjct: 601 PEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCH 660

Query: 661 EVAHAAAEKHKRDLAAEFGIPLFVRRVVDTKEA---FDLVETSDSGTNFQEEGVSPLELR 720
           EVAHAAAE++K+ +A EFGIPLFVRRV+D+KEA     LVE   +G + ++ GVSPL LR
Sbjct: 661 EVAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVEDESTGDS-EDAGVSPLHLR 720

Query: 721 TAAMALLRHGPRMPSKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRG 780
           +AAMALLRHG RMPS R+EEL+  V  YYG  ++SEEDLEKALL+G+SPHERR+L++K+G
Sbjct: 721 SAAMALLRHGNRMPSSRREELLQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLERKKG 780

Query: 781 IALKHSAQRIFPDA---EHQNGACSTD---TLTVANSSIDVNNHMNSDSGSVSETCLPGG 840
           ++ KHSA+    D    E+ +G    D    +TV  S++        DSG    T    G
Sbjct: 781 VSFKHSAEVAGMDKQEDENNDGEALADFEKIMTVERSTV------VDDSG--DGTSEGDG 840

Query: 841 EVSFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAA 900
               +D         + N KLSLLGHGPHGKQ+V++LLRE+GEDG+R FCQRWR+VFV A
Sbjct: 841 AKELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDA 890

Query: 901 IQPRFLPAGWDVNHSGRRDFGEFSVYNPIKKPS 909
           + PR LP GW+V+HSGRRDFGEFSVYNP K+ S
Sbjct: 901 VHPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 890

BLAST of Spg008057 vs. ExPASy Swiss-Prot
Match: Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.4e-47
Identity = 125/325 (38.46%), Postives = 172/325 (52.92%), Query Frame = 0

Query: 45  KPQYAFKRVLADNSYSAFKHFKLNMNTDNDVNAHPYES-EILSLLENSLPEFDFISERKD 104
           KPQ  +K +L DN+ + F+H  L  + D     HP E   ++  ++ +L E   +   K 
Sbjct: 52  KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEELSVMDFVDRNLSEMRPV---KP 111

Query: 105 FTLSDA-YVWVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLV 164
             L +  +  VE    LE+L   L     FAVD E +  R+F G T L+QIST  EDY+V
Sbjct: 112 LPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIV 171

Query: 165 DTIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP 224
           D   L D +   LR +F + +  KV HGAD DI+WLQRDF IYV NLFDT +A  VL   
Sbjct: 172 DIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLE 231

Query: 225 QKSLAYLLETYCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVD 284
           + SL +LL+ YCGVA NK  Q+ DWR RPL   M +YAR D HYLLYI + +  EL  + 
Sbjct: 232 RNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMA 291

Query: 285 ENSSTDDKFNFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDI 344
           +     D  + L+E  +RS  +C+QLY KE            + + NLN+  +S      
Sbjct: 292 KEDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI----- 351

Query: 345 LSPEFELSVSGSCEENMCLARLNGQ 367
                   V+G CE    +AR + +
Sbjct: 352 --------VAGLCEWRDRIARADDE 357

BLAST of Spg008057 vs. ExPASy Swiss-Prot
Match: A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-46
Identity = 119/311 (38.26%), Postives = 172/311 (55.31%), Query Frame = 0

Query: 10  ALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYSAFKHFKLNM 69
           A V    + + +    R +    + +   ++   +KPQ  +  +L +N+   F+H  L  
Sbjct: 162 AAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVNNANLPFEHVWLER 221

Query: 70  NTDNDVNAHPYES-EILSLLENSLPEFDFISERKDFTLSDA-YVWVENESQLEELVDVLN 129
           + D+    HP E   +L  ++  + E + +   K   L    + +V+    L+ELV  L 
Sbjct: 222 SEDDLRAMHPLEKFSVLDFVDKDVNEMEPV---KPLPLEQTPFKFVQEVKDLKELVAKLR 281

Query: 130 KETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMN-LLRPVFANSRICKV 189
               FAVD E +  RSF G T L+QIST  EDY+VDT  L   +   LR +F + +  KV
Sbjct: 282 SVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKV 341

Query: 190 FHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKMLQREDW 249
            HGAD DI+WLQRDF IYV NLFDT +A  VL+  + SL +LL+ +CGV  NK  Q  DW
Sbjct: 342 MHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADW 401

Query: 250 RQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRRSNMICLQ 309
           R RPL  +M +YAR D HYLLYI + +  EL+++ ++ +  D  + LLE  +RS  +C Q
Sbjct: 402 RIRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTD--SPLLEVYKRSYDVCTQ 461

Query: 310 LYAKE--TEGS 316
           LY KE  TE S
Sbjct: 462 LYEKELLTENS 466

BLAST of Spg008057 vs. ExPASy Swiss-Prot
Match: Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 5.0e-43
Identity = 127/350 (36.29%), Postives = 176/350 (50.29%), Query Frame = 0

Query: 66  KLNMNTDNDVNAHPYESEILSLLENSL--PEFDFISERKDFTLSDAY--VWVENESQLEE 125
           KL+ +  N +  HPYE EI    +NS+  P    +S   D    D    +WV  ESQL +
Sbjct: 175 KLDPSLKNSL-PHPYEPEI----QNSVYPPWVSEMSNPIDTGSVDETEPIWVSTESQLSD 234

Query: 126 LVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFANS 185
           ++  L      AVD E H  RSF GF  L+QIS  ++D++VDT+ L + +  L  VF N 
Sbjct: 235 MLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREELEALNVVFTNP 294

Query: 186 RICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKML 245
            I KVFHGA  DI+WLQRDF +YVVNLFDT  A +VL      LA+LL+ YC    +K  
Sbjct: 295 NIIKVFHGATMDIIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLLQKYCDYDADKRY 354

Query: 246 QREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRRSN 305
           Q  DWR RPL  +M++YA++D HYLLYI + L +EL     + S + K N +      S 
Sbjct: 355 QMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNEL----ISKSAERKENLMQSVFNSSK 414

Query: 306 MICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMCLA 365
            I L+ Y  E E         +   RN+ ++  S K            + G   E + + 
Sbjct: 415 QISLRKY--ELEPYDPIYGLGTDGWRNVLTKFGSSK------------IIG--REALMIY 474

Query: 366 RLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALA 412
           R    W+  V                   AR  DES+RYVL ++ ++A+A
Sbjct: 475 RALHDWRDSV-------------------ARKEDESVRYVLPNRLLIAIA 480

BLAST of Spg008057 vs. ExPASy Swiss-Prot
Match: P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-41
Identity = 110/282 (39.01%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 62  FKHFKLNMNTDNDVNAHPYESEI------LSLLENSLPE-FDFISERKDFTLSDAYVWVE 121
           F H +     + D+ AHPY+ E+       S+L+   P+ +  + E     +        
Sbjct: 240 FIHQQRTQQVEQDMFAHPYQYELDHFTPPQSVLQRPKPQLYRAVGETPCHLV-------- 299

Query: 122 NESQLEELVDVLNKETV----FAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDS 181
             S L+ELV+ LN++ +    FAVD E HS RSFLG T L+QIST  ED++VDT+ L   
Sbjct: 300 --SSLDELVE-LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSD 359

Query: 182 MNLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 241
           M +L     +  I KVFHGAD+DI WLQ+DF +YVVN+FDT +A  +L+  + SL +LL 
Sbjct: 360 MYILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLR 419

Query: 242 TYCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKF 301
            YCGV +NK  Q  DWR RPL  +M+ YAR D HYLLYI + +  EL +   +       
Sbjct: 420 LYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPVQ--- 479

Query: 302 NFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQ 333
             L    +RS  ICL+ + K                ++LNSQ
Sbjct: 480 --LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQ 505

BLAST of Spg008057 vs. ExPASy TrEMBL
Match: A0A6J1C5X3 (protein RRP6-like 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007668 PE=4 SV=1)

HSP 1 Score: 1573.9 bits (4074), Expect = 0.0e+00
Identity = 795/917 (86.70%), Postives = 829/917 (90.40%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLR-DDQKPQYAFKRVLADNSY 60
           MEL+HKVKI L VASFAALTILFTARRRRKQ+ VRSSCYLR DDQK QY FKRVLADNSY
Sbjct: 1   MELKHKVKIVLAVASFAALTILFTARRRRKQKSVRSSCYLRGDDQKXQYTFKRVLADNSY 60

Query: 61  SAFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYVWVENESQL 120
           S FKH KLNMNTDNDVN+HPYESEILSLLENS PE+DF+SERKDFT SDAYVWVE ESQL
Sbjct: 61  SVFKHLKLNMNTDNDVNSHPYESEILSLLENSFPEYDFVSERKDFTSSDAYVWVETESQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTAL+QIST KEDYLVD IALHDSMNLLRP+FA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTRKEDYLVDAIALHDSMNLLRPIFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACE+LSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACELLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWRQRPLSA+MVQYARTDAHYLL+IANCLLSELKQV+ENSSTDDKFNFLLEASRR
Sbjct: 241 MLQREDWRQRPLSAEMVQYARTDAHYLLHIANCLLSELKQVNENSSTDDKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQ----LVSCKTQDILSPEFELSVSGSCE 360
           SNMICLQLYAKETEGSPGESAASSISSR LNSQ    ++SCKTQ      F+  V   C 
Sbjct: 301 SNMICLQLYAKETEGSPGESAASSISSRRLNSQGVSTIISCKTQ------FQDLVRRLC- 360

Query: 361 ENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVS 420
                      W+                    + ARVHDESLRYVLSDQAIVALA +V 
Sbjct: 361 ----------AWRD-------------------LMARVHDESLRYVLSDQAIVALANKVP 420

Query: 421 KNTMGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQN 480
           KNTM LYATIAQADL+VDLSPSL LPSPSPVVCSHLDDLHCLL DKSGDLDNIFL ILQN
Sbjct: 421 KNTMELYATIAQADLHVDLSPSLFLPSPSPVVCSHLDDLHCLLHDKSGDLDNIFLVILQN 480

Query: 481 CIGSNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVY 540
           CIGS+GSCPLSIFNYALLVKYNLKMM ISK N+RKNAKQISKKASRELFVQKFSCKSPVY
Sbjct: 481 CIGSDGSCPLSIFNYALLVKYNLKMMTISKHNHRKNAKQISKKASRELFVQKFSCKSPVY 540

Query: 541 HNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ 600
           HNCRIYANDGRLLCYCDRRKLEWY+RRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ
Sbjct: 541 HNCRIYANDGRLLCYCDRRKLEWYVRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQ 600

Query: 601 SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHK 660
           SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE+AHAAAEKHK
Sbjct: 601 SKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKHK 660

Query: 661 RDLAAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMP 720
           R+LAAEFGIPLFVRRVVDTKEAF+L E SDSGTNFQEEGVSPLELRTAAMALLRHGPRMP
Sbjct: 661 RELAAEFGIPLFVRRVVDTKEAFNLAEPSDSGTNFQEEGVSPLELRTAAMALLRHGPRMP 720

Query: 721 SKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDA 780
           SKRQEELML VMRYYGR EISEEDLE+ALLVGMSPHERRRLQKKRGIALKHSAQ  FP+A
Sbjct: 721 SKRQEELMLTVMRYYGRREISEEDLERALLVGMSPHERRRLQKKRGIALKHSAQSNFPNA 780

Query: 781 EHQNGACSTDTLTVANSSIDVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNPK 840
           EHQNGAC  DT T  NSS+D+N+H NSDSGSVS+ CLPGG+V FSDNGSARTAQPKFNPK
Sbjct: 781 EHQNGACDIDTSTAVNSSVDINSHTNSDSGSVSDKCLPGGQVGFSDNGSARTAQPKFNPK 840

Query: 841 LSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDF 900
           LSLLGHGPHGKQVVDHLLREYGE+GIRQFCQRWRQVFVAA +PRFLPAGWDVNHSGRRDF
Sbjct: 841 LSLLGHGPHGKQVVDHLLREYGEEGIRQFCQRWRQVFVAATKPRFLPAGWDVNHSGRRDF 881

Query: 901 GEFSVYNPIKKPSPAIE 913
           GEFSVYNPIKK SP+ E
Sbjct: 901 GEFSVYNPIKKASPSNE 881

BLAST of Spg008057 vs. ExPASy TrEMBL
Match: A0A6J1EWH5 (protein RRP6-like 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437193 PE=4 SV=1)

HSP 1 Score: 1554.3 bits (4023), Expect = 0.0e+00
Identity = 798/919 (86.83%), Postives = 821/919 (89.34%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MEL  K KIALVVAS AALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELHRKDKIALVVASLAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN+HPYESEILSLLENS  EFDFI SER DFTLSD YVWVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSHPYESEILSLLENSSSEFDFISSERNDFTLSDTYVWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWR RPLS DMV+YARTDAHYLL+IANCLLSELKQV+ENSSTD KFNFLLEASRR
Sbjct: 241 MLQREDWRLRPLSEDMVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMC 360
           SNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C     
Sbjct: 301 SNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC----- 360

Query: 361 LARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTM 420
                  W+                    + ARVHDESLRYVLSDQAI+ALATQ+SKNT 
Sbjct: 361 ------AWRD-------------------LMARVHDESLRYVLSDQAIIALATQMSKNTR 420

Query: 421 GLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480
            LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS
Sbjct: 421 ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480

Query: 481 NGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCR 540
           NGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNCR
Sbjct: 481 NGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCR 540

Query: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKN 600
           IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKKN
Sbjct: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKN 600

Query: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660
           ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR+LA
Sbjct: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNLA 660

Query: 661 AEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQ 720
           AEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KRQ
Sbjct: 661 AEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQ 720

Query: 721 EELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQN 780
           EELM VVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQN
Sbjct: 721 EELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQN 780

Query: 781 GACSTDTLTVANSSI------DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFN 840
           GACS D+ TV NSSI      DVNNHMNSD+G+V ETCLP GEV  SDNGSA TAQPKFN
Sbjct: 781 GACSIDSSTVTNSSIDADADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSAITAQPKFN 840

Query: 841 PKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 900
            KLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR
Sbjct: 841 SKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 883

Query: 901 DFGEFSVYNPIKKPSPAIE 913
           DFGEFSVYN IKK SP IE
Sbjct: 901 DFGEFSVYNSIKKLSPTIE 883

BLAST of Spg008057 vs. ExPASy TrEMBL
Match: A0A6J1JM94 (protein RRP6-like 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485940 PE=4 SV=1)

HSP 1 Score: 1553.5 bits (4021), Expect = 0.0e+00
Identity = 796/919 (86.62%), Postives = 822/919 (89.45%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MELQ K KIALVVASFAALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELQRKAKIALVVASFAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN+HPYESEILSLLENS  EFDFI SER DFTLSD YVWVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSHPYESEILSLLENSSSEFDFISSERNDFTLSDTYVWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAK CEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKTCEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRR 300
           MLQREDWRQRPLS DMV+YARTDAHYLL+IANCLLSELKQV+ENSSTD KFNFLLEASRR
Sbjct: 241 MLQREDWRQRPLSEDMVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRR 300

Query: 301 SNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENMC 360
           SNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C     
Sbjct: 301 SNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC----- 360

Query: 361 LARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNTM 420
                  W+                    + ARVHDESLRYVLSDQAI ALATQ+SKN+ 
Sbjct: 361 ------AWRD-------------------LMARVHDESLRYVLSDQAIAALATQMSKNSW 420

Query: 421 GLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGS 480
            LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLRDKSGD D+IFLGILQNCIGS
Sbjct: 421 ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDPDSIFLGILQNCIGS 480

Query: 481 NGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNCR 540
           NGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNCR
Sbjct: 481 NGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCR 540

Query: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKKN 600
           IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKKN
Sbjct: 541 IYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKN 600

Query: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDLA 660
           ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR+LA
Sbjct: 601 ICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNLA 660

Query: 661 AEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKRQ 720
           AEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KRQ
Sbjct: 661 AEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQ 720

Query: 721 EELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQN 780
           EELM VVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQN
Sbjct: 721 EELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQN 780

Query: 781 GACSTDTLTVANSSI------DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFN 840
           GACS D+ T+ NSSI      DVNNHMNSD+G+V ETCLP GEV   +NGSA TAQPKFN
Sbjct: 781 GACSIDSSTMTNSSIDADADADVNNHMNSDNGTVPETCLPCGEVKVPENGSAITAQPKFN 840

Query: 841 PKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 900
           PKLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR
Sbjct: 841 PKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRR 883

Query: 901 DFGEFSVYNPIKKPSPAIE 913
           DFGEFSVYN IKK SPAIE
Sbjct: 901 DFGEFSVYNSIKKLSPAIE 883

BLAST of Spg008057 vs. ExPASy TrEMBL
Match: A0A6J1ESK7 (protein RRP6-like 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437193 PE=4 SV=1)

HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 798/918 (86.93%), Postives = 821/918 (89.43%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MEL  K KIALVVAS AALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELHRKDKIALVVASLAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN+HPYESEILSLLENS  EFDFI SER DFTLSD YVWVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSHPYESEILSLLENSSSEFDFISSERNDFTLSDTYVWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVD-ENSSTDDKFNFLLEASR 300
           MLQREDWR RPLS DMV+YARTDAHYLL+IANCLLSELKQV+ ENSSTD KFNFLLEASR
Sbjct: 241 MLQREDWRLRPLSEDMVRYARTDAHYLLHIANCLLSELKQVNAENSSTDGKFNFLLEASR 300

Query: 301 RSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENM 360
           RSNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C    
Sbjct: 301 RSNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC---- 360

Query: 361 CLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNT 420
                   W+                    + ARVHDESLRYVLSDQAI+ALATQ+SKNT
Sbjct: 361 -------AWRD-------------------LMARVHDESLRYVLSDQAIIALATQMSKNT 420

Query: 421 MGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIG 480
             LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIG
Sbjct: 421 RELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIG 480

Query: 481 SNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNC 540
           SNGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNC
Sbjct: 481 SNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNC 540

Query: 541 RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKK 600
           RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKK
Sbjct: 541 RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKK 600

Query: 601 NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDL 660
           NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR+L
Sbjct: 601 NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNL 660

Query: 661 AAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKR 720
           AAEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KR
Sbjct: 661 AAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKR 720

Query: 721 QEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQ 780
           QEELM VVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQ
Sbjct: 721 QEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQ 780

Query: 781 NGACSTDTLTVANSSI----DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNP 840
           NGACS D+ TV NSSI    DVNNHMNSD+G+V ETCLP GEV  SDNGSA TAQPKFN 
Sbjct: 781 NGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSAITAQPKFNS 840

Query: 841 KLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD 900
           KLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD
Sbjct: 841 KLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD 882

Query: 901 FGEFSVYNPIKKPSPAIE 913
           FGEFSVYN IKK SP IE
Sbjct: 901 FGEFSVYNSIKKLSPTIE 882

BLAST of Spg008057 vs. ExPASy TrEMBL
Match: A0A6J1JK94 (protein RRP6-like 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485940 PE=4 SV=1)

HSP 1 Score: 1549.6 bits (4011), Expect = 0.0e+00
Identity = 796/918 (86.71%), Postives = 822/918 (89.54%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYS 60
           MELQ K KIALVVASFAALTI FTARRRRKQR VRSSCYLRDDQKPQYAFKRVLADNSYS
Sbjct: 1   MELQRKAKIALVVASFAALTIYFTARRRRKQRSVRSSCYLRDDQKPQYAFKRVLADNSYS 60

Query: 61  AFKHFKLNMNTDNDVNAHPYESEILSLLENSLPEFDFI-SERKDFTLSDAYVWVENESQL 120
           AFKH KL+MNTDNDVN+HPYESEILSLLENS  EFDFI SER DFTLSD YVWVE  SQL
Sbjct: 61  AFKHLKLDMNTDNDVNSHPYESEILSLLENSSSEFDFISSERNDFTLSDTYVWVETASQL 120

Query: 121 EELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMNLLRPVFA 180
           EELVDVLNKE VFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM+LLRPVFA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMSLLRPVFA 180

Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 240
           NS ICKVFHGADNDILWLQRDFHIYVVNLFDTAK CEVLSKPQKSLAYLLETYCGVATNK
Sbjct: 181 NSHICKVFHGADNDILWLQRDFHIYVVNLFDTAKTCEVLSKPQKSLAYLLETYCGVATNK 240

Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVD-ENSSTDDKFNFLLEASR 300
           MLQREDWRQRPLS DMV+YARTDAHYLL+IANCLLSELKQV+ ENSSTD KFNFLLEASR
Sbjct: 241 MLQREDWRQRPLSEDMVRYARTDAHYLLHIANCLLSELKQVNAENSSTDGKFNFLLEASR 300

Query: 301 RSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSVSGSCEENM 360
           RSNMICLQLY KETEGSPGESAASSI  R+LNSQL S KTQ      F+  V   C    
Sbjct: 301 RSNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQ------FQDHVRRLC---- 360

Query: 361 CLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVALATQVSKNT 420
                   W+                    + ARVHDESLRYVLSDQAI ALATQ+SKN+
Sbjct: 361 -------AWRD-------------------LMARVHDESLRYVLSDQAIAALATQMSKNS 420

Query: 421 MGLYATIAQADLNVDLSPSLLLPSPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIG 480
             LYATIAQADLNVDLSPSLLLP PSPVVCSHLDDLHCLLRDKSGD D+IFLGILQNCIG
Sbjct: 421 WELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDPDSIFLGILQNCIG 480

Query: 481 SNGSCPLSIFNYALLVKYNLKMMAISKQNYRKNAKQISKKASRELFVQKFSCKSPVYHNC 540
           SNGSCPLSIFNYALLVKYNLKMM ISK+N R+NAK++SKKASRELFVQKFSCKSPVYHNC
Sbjct: 481 SNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNC 540

Query: 541 RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRPEDEGNDFYIQSKK 600
           RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIK+LFEPKGRPEDEGNDFYIQSKK
Sbjct: 541 RIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKK 600

Query: 601 NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRDL 660
           NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKR+L
Sbjct: 601 NICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNL 660

Query: 661 AAEFGIPLFVRRVVDTKEAFDLVETSDSGTNFQEEGVSPLELRTAAMALLRHGPRMPSKR 720
           AAEFGIPLFVRRVVDTKEAFDLVE+SDS TNFQEEGVSPLELRTAAMALLRHGPRMP KR
Sbjct: 661 AAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKR 720

Query: 721 QEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGIALKHSAQRIFPDAEHQ 780
           QEELM VVMRYYGR EISEEDLEKALLVGMSPHERRRLQKK+GIALKHS Q IFPDAEHQ
Sbjct: 721 QEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQ 780

Query: 781 NGACSTDTLTVANSSI----DVNNHMNSDSGSVSETCLPGGEVSFSDNGSARTAQPKFNP 840
           NGACS D+ T+ NSSI    DVNNHMNSD+G+V ETCLP GEV   +NGSA TAQPKFNP
Sbjct: 781 NGACSIDSSTMTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVPENGSAITAQPKFNP 840

Query: 841 KLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD 900
           KLSLLGHGPHGKQVVDHLL EYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD
Sbjct: 841 KLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRD 882

Query: 901 FGEFSVYNPIKKPSPAIE 913
           FGEFSVYN IKK SPAIE
Sbjct: 901 FGEFSVYNSIKKLSPAIE 882

BLAST of Spg008057 vs. TAIR 10
Match: AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 569/932 (61.05%), Postives = 694/932 (74.46%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILF-TARRRRKQRRVR----SSCYLRDDQKPQYAFKRVLA 60
           MEL+ K K+ + VAS  A+TILF T  RRR+QRR +    SSCYL  + KPQ+ FKRVLA
Sbjct: 1   MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60

Query: 61  DNSYSAFKHFKL----NMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYV 120
           DNSYS FKH KL    + + +   N HPYE+EI  LLEN   EF F+       +SD+YV
Sbjct: 61  DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120

Query: 121 WVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM 180
           WVE ESQL+EL ++L KE VFAVDTEQHSLRSFLGFTAL+QIST +ED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180

Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
           ++LRPVF++  ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240

Query: 241 YCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQV-DENSSTDDKF 300
            CGVATNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L +ELKQ+  ++SS DD+F
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSSSPDDRF 300

Query: 301 NFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSV 360
           +FLLEASRRSNM CLQLY KETE  PG +A+SSI  R+LN                + ++
Sbjct: 301 HFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGH------------GDKSNI 360

Query: 361 SGSCEENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVAL 420
           S + EE   L R    W+  +G                   R+HDES RYVLSDQAIV L
Sbjct: 361 SLNAEE---LVRKLCAWRDLMG-------------------RIHDESTRYVLSDQAIVGL 420

Query: 421 ATQVSKNTMGLYATIAQADLNVDLSPSL--LLPSPSPVVCSHLDDLHCLLRDKSGDLDNI 480
           + +    T  +Y TIA  DL  + SPSL   + SP PV+CSHLDD++ ++ DK   LD++
Sbjct: 421 SCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAKLDDL 480

Query: 481 FLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMAIS--KQNYRKNAK-QISKKASRELFV 540
              +L+ C+G+NG+CP+S+FNY+LLV +  K+ + S  KQN  KN K Q ++KASRELFV
Sbjct: 481 LPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASRELFV 540

Query: 541 QKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRP 600
           +KFSCK+PVYHNCRIYANDGRLLCYCD+RKLEWYL R LA+LV+++PPAI LLFEPKGRP
Sbjct: 541 KKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEWYLNRGLAKLVEENPPAIMLLFEPKGRP 600

Query: 601 EDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 660
           EDEGNDFYIQ+K+NICVGCGEG HYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCVDCHE
Sbjct: 601 EDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHE 660

Query: 661 VAHAAAEKHKRDLAAEFGIPLFVRRVVDTKEA---FDLVETSDSGTNFQEEGVSPLELRT 720
           VAHAAAE++K+ +A EFGIPLFVRRV+D+KEA     LVE   +G + ++ GVSPL LR+
Sbjct: 661 VAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVEDESTGDS-EDAGVSPLHLRS 720

Query: 721 AAMALLRHGPRMPSKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGI 780
           AAMALLRHG RMPS R+EEL+  V  YYG  ++SEEDLEKALL+G+SPHERR+L++K+G+
Sbjct: 721 AAMALLRHGNRMPSSRREELLQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLERKKGV 780

Query: 781 ALKHSAQRIFPDA---EHQNGACSTD---TLTVANSSIDVNNHMNSDSGSVSETCLPGGE 840
           + KHSA+    D    E+ +G    D    +TV  S++        DSG    T    G 
Sbjct: 781 SFKHSAEVAGMDKQEDENNDGEALADFEKIMTVERSTV------VDDSG--DGTSEGDGA 840

Query: 841 VSFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAI 900
              +D         + N KLSLLGHGPHGKQ+V++LLRE+GEDG+R FCQRWR+VFV A+
Sbjct: 841 KELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDAV 889

Query: 901 QPRFLPAGWDVNHSGRRDFGEFSVYNPIKKPS 909
            PR LP GW+V+HSGRRDFGEFSVYNP K+ S
Sbjct: 901 HPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 889

BLAST of Spg008057 vs. TAIR 10
Match: AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 1043.9 bits (2698), Expect = 7.6e-305
Identity = 553/913 (60.57%), Postives = 677/913 (74.15%), Query Frame = 0

Query: 1   MELQHKVKIALVVASFAALTILF-TARRRRKQRRVR----SSCYLRDDQKPQYAFKRVLA 60
           MEL+ K K+ + VAS  A+TILF T  RRR+QRR +    SSCYL  + KPQ+ FKRVLA
Sbjct: 1   MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60

Query: 61  DNSYSAFKHFKL----NMNTDNDVNAHPYESEILSLLENSLPEFDFISERKDFTLSDAYV 120
           DNSYS FKH KL    + + +   N HPYE+EI  LLEN   EF F+       +SD+YV
Sbjct: 61  DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120

Query: 121 WVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSM 180
           WVE ESQL+EL ++L KE VFAVDTEQHSLRSFLGFTAL+QIST +ED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180

Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
           ++LRPVF++  ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240

Query: 241 YCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQV-DENSSTDDKF 300
            CGVATNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L +ELKQ+  ++SS DD+F
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSSSPDDRF 300

Query: 301 NFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDILSPEFELSV 360
           +FLLEASRRSNM CLQLY KETE  PG +A+SSI  R+LN                + ++
Sbjct: 301 HFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGH------------GDKSNI 360

Query: 361 SGSCEENMCLARLNGQWKVGVGSLSALRLLQDAPGISLINARVHDESLRYVLSDQAIVAL 420
           S + EE   L R    W+  +G                   R+HDES RYVLSDQAIV L
Sbjct: 361 SLNAEE---LVRKLCAWRDLMG-------------------RIHDESTRYVLSDQAIVGL 420

Query: 421 ATQVSKNTMGLYATIAQADLNVDLSPSL--LLPSPSPVVCSHLDDLHCLLRDKSGDLDNI 480
           + +    T  +Y TIA  DL  + SPSL   + SP PV+CSHLDD++ ++ DK   LD++
Sbjct: 421 SCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAKLDDL 480

Query: 481 FLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMAIS--KQNYRKNAK-QISKKASRELFV 540
              +L+ C+G+NG+CP+S+FNY+LLV +  K+ + S  KQN  KN K Q ++KASRELFV
Sbjct: 481 LPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASRELFV 540

Query: 541 QKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKLLFEPKGRP 600
           +KFSCK+PVYHNCRIYANDGRLLCYCD+RKLEWYL R LA+LV+++PPAI LLFEPKGRP
Sbjct: 541 KKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEWYLNRGLAKLVEENPPAIMLLFEPKGRP 600

Query: 601 EDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 660
           EDEGNDFYIQ+K+NICVGCGEG HYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCVDCHE
Sbjct: 601 EDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHE 660

Query: 661 VAHAAAEKHKRDLAAEFGIPLFVRRVVDTKEA---FDLVETSDSGTNFQEEGVSPLELRT 720
           VAHAAAE++K+ +A EFGIPLFVRRV+D+KEA     LVE   +G + ++ GVSPL LR+
Sbjct: 661 VAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVEDESTGDS-EDAGVSPLHLRS 720

Query: 721 AAMALLRHGPRMPSKRQEELMLVVMRYYGRSEISEEDLEKALLVGMSPHERRRLQKKRGI 780
           AAMALLRHG RMPS R+EEL+  V  YYG  ++SEEDLEKALL+G+SPHERR+L++K+G+
Sbjct: 721 AAMALLRHGNRMPSSRREELLQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLERKKGV 780

Query: 781 ALKHSAQRIFPDA---EHQNGACSTD---TLTVANSSIDVNNHMNSDSGSVSETCLPGGE 840
           + KHSA+    D    E+ +G    D    +TV  S++        DSG    T    G 
Sbjct: 781 SFKHSAEVAGMDKQEDENNDGEALADFEKIMTVERSTV------VDDSG--DGTSEGDGA 840

Query: 841 VSFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEDGIRQFCQRWRQVFVAAI 890
              +D         + N KLSLLGHGPHGKQ+V++LLRE+GEDG+R FCQRWR+VFV A+
Sbjct: 841 KELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDAV 870

BLAST of Spg008057 vs. TAIR 10
Match: AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-48
Identity = 125/325 (38.46%), Postives = 172/325 (52.92%), Query Frame = 0

Query: 45  KPQYAFKRVLADNSYSAFKHFKLNMNTDNDVNAHPYES-EILSLLENSLPEFDFISERKD 104
           KPQ  +K +L DN+ + F+H  L  + D     HP E   ++  ++ +L E   +   K 
Sbjct: 52  KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEELSVMDFVDRNLSEMRPV---KP 111

Query: 105 FTLSDA-YVWVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLV 164
             L +  +  VE    LE+L   L     FAVD E +  R+F G T L+QIST  EDY+V
Sbjct: 112 LPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIV 171

Query: 165 DTIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP 224
           D   L D +   LR +F + +  KV HGAD DI+WLQRDF IYV NLFDT +A  VL   
Sbjct: 172 DIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLE 231

Query: 225 QKSLAYLLETYCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVD 284
           + SL +LL+ YCGVA NK  Q+ DWR RPL   M +YAR D HYLLYI + +  EL  + 
Sbjct: 232 RNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMA 291

Query: 285 ENSSTDDKFNFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDI 344
           +     D  + L+E  +RS  +C+QLY KE            + + NLN+  +S      
Sbjct: 292 KEDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI----- 351

Query: 345 LSPEFELSVSGSCEENMCLARLNGQ 367
                   V+G CE    +AR + +
Sbjct: 352 --------VAGLCEWRDRIARADDE 357

BLAST of Spg008057 vs. TAIR 10
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-48
Identity = 125/325 (38.46%), Postives = 172/325 (52.92%), Query Frame = 0

Query: 45  KPQYAFKRVLADNSYSAFKHFKLNMNTDNDVNAHPYES-EILSLLENSLPEFDFISERKD 104
           KPQ  +K +L DN+ + F+H  L  + D     HP E   ++  ++ +L E   +   K 
Sbjct: 52  KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEELSVMDFVDRNLSEMRPV---KP 111

Query: 105 FTLSDA-YVWVENESQLEELVDVLNKETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLV 164
             L +  +  VE    LE+L   L     FAVD E +  R+F G T L+QIST  EDY+V
Sbjct: 112 LPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIV 171

Query: 165 DTIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP 224
           D   L D +   LR +F + +  KV HGAD DI+WLQRDF IYV NLFDT +A  VL   
Sbjct: 172 DIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLE 231

Query: 225 QKSLAYLLETYCGVATNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLSELKQVD 284
           + SL +LL+ YCGVA NK  Q+ DWR RPL   M +YAR D HYLLYI + +  EL  + 
Sbjct: 232 RNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMA 291

Query: 285 ENSSTDDKFNFLLEASRRSNMICLQLYAKETEGSPGESAASSISSRNLNSQLVSCKTQDI 344
           +     D  + L+E  +RS  +C+QLY KE            + + NLN+  +S      
Sbjct: 292 KEDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI----- 351

Query: 345 LSPEFELSVSGSCEENMCLARLNGQ 367
                   V+G CE    +AR + +
Sbjct: 352 --------VAGLCEWRDRIARADDE 357

BLAST of Spg008057 vs. TAIR 10
Match: AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 187.6 bits (475), Expect = 4.5e-47
Identity = 119/311 (38.26%), Postives = 172/311 (55.31%), Query Frame = 0

Query: 10  ALVVASFAALTILFTARRRRKQRRVRSSCYLRDDQKPQYAFKRVLADNSYSAFKHFKLNM 69
           A V    + + +    R +    + +   ++   +KPQ  +  +L +N+   F+H  L  
Sbjct: 162 AAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVNNANLPFEHVWLER 221

Query: 70  NTDNDVNAHPYES-EILSLLENSLPEFDFISERKDFTLSDA-YVWVENESQLEELVDVLN 129
           + D+    HP E   +L  ++  + E + +   K   L    + +V+    L+ELV  L 
Sbjct: 222 SEDDLRAMHPLEKFSVLDFVDKDVNEMEPV---KPLPLEQTPFKFVQEVKDLKELVAKLR 281

Query: 130 KETVFAVDTEQHSLRSFLGFTALVQISTDKEDYLVDTIALHDSMN-LLRPVFANSRICKV 189
               FAVD E +  RSF G T L+QIST  EDY+VDT  L   +   LR +F + +  KV
Sbjct: 282 SVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKV 341

Query: 190 FHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKMLQREDW 249
            HGAD DI+WLQRDF IYV NLFDT +A  VL+  + SL +LL+ +CGV  NK  Q  DW
Sbjct: 342 MHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADW 401

Query: 250 RQRPLSADMVQYARTDAHYLLYIANCLLSELKQVDENSSTDDKFNFLLEASRRSNMICLQ 309
           R RPL  +M +YAR D HYLLYI + +  EL+++ ++ +  D  + LLE  +RS  +C Q
Sbjct: 402 RIRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTD--SPLLEVYKRSYDVCTQ 461

Query: 310 LYAKE--TEGS 316
           LY KE  TE S
Sbjct: 462 LYEKELLTENS 466

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135803.10.0e+0086.70protein RRP6-like 3 isoform X1 [Momordica charantia][more]
XP_038887745.10.0e+0086.24protein RRP6-like 3 [Benincasa hispida] >XP_038887746.1 protein RRP6-like 3 [Ben... [more]
XP_023531760.10.0e+0086.80protein RRP6-like 3 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023531755.10.0e+0086.62protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531756.1 prot... [more]
XP_022930823.10.0e+0086.83protein RRP6-like 3 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A9LLI80.0e+0060.99Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1[more]
Q0WVE83.4e-4738.46Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1[more]
A9LLI76.3e-4638.26Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1[more]
Q101465.0e-4336.29Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
P569601.6e-4139.01Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1C5X30.0e+0086.70protein RRP6-like 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007668 PE... [more]
A0A6J1EWH50.0e+0086.83protein RRP6-like 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437193 PE=... [more]
A0A6J1JM940.0e+0086.62protein RRP6-like 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485940 PE=4 ... [more]
A0A6J1ESK70.0e+0086.93protein RRP6-like 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437193 PE=... [more]
A0A6J1JK940.0e+0086.71protein RRP6-like 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485940 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT2G32415.10.0e+0061.05Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT2G32415.27.6e-30560.57Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT1G54440.12.4e-4838.46Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT1G54440.22.4e-4838.46Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT5G35910.14.5e-4738.26Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 110..278
e-value: 2.8E-41
score: 153.1
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 110..277
e-value: 2.0E-46
score: 158.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 23..313
e-value: 3.1E-82
score: 278.2
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 389..468
e-value: 4.3E-11
score: 44.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 818..839
NoneNo IPR availablePANTHERPTHR12124:SF68PROTEIN RRP6-LIKE 3coord: 1..906
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 110..298
e-value: 1.76477E-96
score: 299.128
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..906
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 45..310

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008057.1Spg008057.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0071040 nuclear polyadenylation-dependent antisense transcript catabolic process
biological_process GO:0071039 nuclear polyadenylation-dependent CUT catabolic process
biological_process GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process
biological_process GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process
biological_process GO:0071037 nuclear polyadenylation-dependent snRNA catabolic process
biological_process GO:0071038 nuclear polyadenylation-dependent tRNA catabolic process
biological_process GO:0071051 polyadenylation-dependent snoRNA 3'-end processing
biological_process GO:0071044 histone mRNA catabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0005730 nucleolus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000176 nuclear exosome (RNase complex)
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding