Spg007977 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg007977
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing family protein
Location	scaffold4: 6541639 .. 6543208 (-)
RNA-Seq Expression	Spg007977
Synteny	Spg007977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAGAAATGGGGAGCGGCACTAAACGACGTCGTTGCTTCGTTAACGGCGACCCCGAAGGTGAAGGCGATCGTCAAGAGCTGACAATTGACAATGACACGAAGGGTTTCAAAAACAGAAATTTAATTTATTTATTTCAATTATGCCACACTCCTCCGAGTGGTTACTGCAACTTCTTCAACGGTTCCTCAAGAACTCAATCAAAATCCAACAAATCCACGCCCTTCTAATCACCGACGGTCATCTTCTCCACAATTCCCAAACTCCAAATCCAAAATGGATCGCCACCCTTCTCTACAACACTCTCATCAGAGCCTATCTAAGCTTCAACCGTTCCCGCTCCGCCCTTCTCCTCTACACTCAAATGCTCGCTCACCACACCAAACCCAACGCCCACACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTCTCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTTTGAGCGACCCTTTTGTGCTGACATCGTTCGTTGGCTGTTACGCCGAGCTTGGGGAACTGGGTCATGCACGTAAGGTGTTTGATGAAATTACTGAGCCCTGTATCGTTGCGTTTAACTCTATGCTTGATGCGTTTGTCAAAAATGGGGAGTTGGGGTCTGCTGTTTTGATGTTTAGGTCCATGCCTGAGCGTGATGTGGTTTCTTGGACTAGTGTTGTTAATGGGTTCTGGTGGAATGGGCGCTTTCTTGAGGCGATTGGGATTTTTGGGATGATGATGATGAGTGGTTCGGTGAAGCCTAATGAAGCTACGTATGTAAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAATTACATGCTTATATCATTAGAAATGAGGGTGATTTGAGTGTTTTTATAGGGACGGCGCTGGTGGATTTTTATGGGAAGATGGGATTATTGGGAAGTGCTAGAACTGTTTTCAATCAAATGAAGAACAGAGAAGTCTGCGCTTGGAATGCAATGATCTCCTCCTTTGCATCCAATGGTAGAGAAACAGAAGCATTGGACCTATTTGCTGAAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCAATTCTCACAGCCTGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAACGATTTCTCGATCGTACCAATTACCGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAAGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCAGATGCTTCCATCTTGGGAGCCCTTTTGAGTGCTTGTAAAATTCATGGAGCGACTGAACTGGGGAATGAAGTGGGAAGAAGATTGCTTGTGATGCAGCCACAACATTGTGGGCGGTACGTTGCTTTGGCGAGTATAAACGCTGGAGCCGAGAAATGGAATCACGCCGCAGTTATAAGAAGAGTAATGGCAGACGCCAGAATTCAGAAAGCTGCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGCCAACATCCTCCTCTTGA

mRNA sequence

ATGAGCCAGAAATGGGGAGCGGCACTAAACGACGTCGTTGCTTCGTTAACGGCGACCCCGAAGCCTAATGAAGCTACGTATGTAAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAATTACATGCTTATATCATTAGAAATGAGGGTGATTTGAGTGTTTTTATAGGGACGGCGCTGGTGGATTTTTATGGGAAGATGGGATTATTGGGAAGTGCTAGAACTGTTTTCAATCAAATGAAGAACAGAGAAGTCTGCGCTTGGAATGCAATGATCTCCTCCTTTGCATCCAATGGTAGAGAAACAGAAGCATTGGACCTATTTGCTGAAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCAATTCTCACAGCCTGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAACGATTTCTCGATCGTACCAATTACCGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAAGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCAGATGCTTCCATCTTGGGAGCCCTTTTGAGTGCTTGTAAAATTCATGGAGCGACTGAACTGGGGAATGAAGTGGGAAGAAGATTGCTTGTGATGCAGCCACAACATTGTGGGCGGTACGTTGCTTTGGCGAGTATAAACGCTGGAGCCGAGAAATGGAATCACGCCGCAGTTATAAGAAGAGTAATGGCAGACGCCAGAATTCAGAAAGCTGCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGCCAACATCCTCCTCTTGA

Coding sequence (CDS)

ATGAGCCAGAAATGGGGAGCGGCACTAAACGACGTCGTTGCTTCGTTAACGGCGACCCCGAAGCCTAATGAAGCTACGTATGTAAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTGAAGGAGTTCTTTGTCGAGGGAAAGAATTACATGCTTATATCATTAGAAATGAGGGTGATTTGAGTGTTTTTATAGGGACGGCGCTGGTGGATTTTTATGGGAAGATGGGATTATTGGGAAGTGCTAGAACTGTTTTCAATCAAATGAAGAACAGAGAAGTCTGCGCTTGGAATGCAATGATCTCCTCCTTTGCATCCAATGGTAGAGAAACAGAAGCATTGGACCTATTTGCTGAAATGAAGGTTGAAGGAATACGTCCCAACGAGGTTACATTTGTTGCAATTCTCACAGCCTGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTCCGATCAATGTCGAACGATTTCTCGATCGTACCAATTACCGAGCACTATGTCTGTGTGGTTGATCTCTTAGGCAAGGCAGGGCTTTTGAGAGAAGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCAGATGCTTCCATCTTGGGAGCCCTTTTGAGTGCTTGTAAAATTCATGGAGCGACTGAACTGGGGAATGAAGTGGGAAGAAGATTGCTTGTGATGCAGCCACAACATTGTGGGCGGTACGTTGCTTTGGCGAGTATAAACGCTGGAGCCGAGAAATGGAATCACGCCGCAGTTATAAGAAGAGTAATGGCAGACGCCAGAATTCAGAAAGCTGCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGCCAACATCCTCCTCTTGA

Protein sequence

MSQKWGAALNDVVASLTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADARIQKAAAYSRVDPMQNLVPTSSS

Homology

[Close]

BLAST of Spg007977 vs. NCBI nr
Match: KAG6589154.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 240/262 (91.60%), Postives = 252/262 (96.18%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEG+LSVFIGTALVDFYGKMGLLGS
Sbjct: 214 KPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           ARTVFNQMKNRE+CAWNAMISS +SNGRE EAL+LFA MKVEGIRPNEVTFVAILTACAR
Sbjct: 274 ARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKVEGIRPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDAS+LG
Sbjct: 334 GKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL+AC IHGATELGNEVGRRLLVMQP+HCGRYV LASINAGAEKW+HAAVIRRVMADAR
Sbjct: 394 ALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADAR 453

Query: 261 IQKAAAYSRVDPMQNLVPTSSS 283
           IQKA AYSRVDPMQNLVP SSS
Sbjct: 454 IQKAPAYSRVDPMQNLVPMSSS 475

[Close]

BLAST of Spg007977 vs. NCBI nr
Match: XP_022930726.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata] >XP_022930727.1 putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 8.6e-132
Identity = 238/262 (90.84%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEG+LSVFIGTALVDFYGKMGLLGS
Sbjct: 214 KPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           ARTVFNQMKNRE+CAWNAMISS +SNGRE EAL+LFA MK EGIRPNEVTFVAILTACAR
Sbjct: 274 ARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAEGIRPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDA++LG
Sbjct: 334 GKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDATVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL+AC IHGATELGNEVGRRLLVMQP+HCGRYV LASINAGAEKW+HAAVIRRVMADAR
Sbjct: 394 ALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADAR 453

Query: 261 IQKAAAYSRVDPMQNLVPTSSS 283
           IQKA AYSRVDPMQNLVP SSS
Sbjct: 454 IQKAPAYSRVDPMQNLVPMSSS 475

[Close]

BLAST of Spg007977 vs. NCBI nr
Match: XP_038887445.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-131
Identity = 237/256 (92.58%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KPNEATYVSVLSSCANLDAEGVLCRGKE+HAYIIR EG+LSVFIGTAL+DFYGKMGLLGS
Sbjct: 214 KPNEATYVSVLSSCANLDAEGVLCRGKEVHAYIIRTEGELSVFIGTALIDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           AR VFNQMKNREVC WNAMISSFASN RETEALDLFA+MKVEGI PNEVTFVAILTACAR
Sbjct: 274 ARIVFNQMKNREVCTWNAMISSFASNNRETEALDLFAKMKVEGIHPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLL+EA +F+ESMPFEPDAS+LG
Sbjct: 334 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLKEAIKFMESMPFEPDASVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALLSACKIHGATELGNEVGRRLLVMQP+HCGRYV LASINAGAEKWN AAV+RRVMADAR
Sbjct: 394 ALLSACKIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWNRAAVLRRVMADAR 453

Query: 261 IQKAAAYSRVDPMQNL 277
           IQKA AYSRVDPMQNL
Sbjct: 454 IQKAPAYSRVDPMQNL 469

[Close]

BLAST of Spg007977 vs. NCBI nr
Match: XP_023529509.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 6.8e-129
Identity = 234/262 (89.31%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KP+EATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEG+LSVFIGTALVDFYGKMGLLGS
Sbjct: 214 KPSEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           ARTVFNQMKNRE+C WNAMISS +SNGRE EAL+LFA +K EGIRPNEVTFVAILTACAR
Sbjct: 274 ARTVFNQMKNRELCVWNAMISSLSSNGREREALELFASIKAEGIRPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDAS+LG
Sbjct: 334 GKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDASVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL+AC IHGATELGNEVGRRLLVMQP+HCGRYV LASINAGAEKW+ AAVIRRVMADA 
Sbjct: 394 ALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSRAAVIRRVMADAG 453

Query: 261 IQKAAAYSRVDPMQNLVPTSSS 283
           IQKA AYSRVDPMQNLVP SSS
Sbjct: 454 IQKAPAYSRVDPMQNLVPISSS 475

[Close]

BLAST of Spg007977 vs. NCBI nr
Match: XP_004144596.1 (putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis sativus])

HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128
Identity = 236/270 (87.41%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 13  VASLTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFY 72
           V  ++ + KPNEATYVSVLSS ANLDAEGVLCRGKE+HAYIIRNEG+ SVFIGT L+DFY
Sbjct: 208 VMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEVHAYIIRNEGEFSVFIGTGLIDFY 267

Query: 73  GKMGLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFV 132
           GKMGLLG ARTVFNQMK REVC WNAMISSFASNGRETEALDLFA MKVEGI PNEVTFV
Sbjct: 268 GKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRETEALDLFATMKVEGIHPNEVTFV 327

Query: 133 AILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF 192
           AILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF
Sbjct: 328 AILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF 387

Query: 193 EPDASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVI 252
           +PDAS+LGALLSACKIHGATELGNEVGRRLL MQP+HCGRYV LAS+NAGAEKWN AAVI
Sbjct: 388 DPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRHCGRYVTLASMNAGAEKWNRAAVI 447

Query: 253 RRVMADARIQKAAAYSRVDPMQNLVPTSSS 283
           RRVMADARIQK  AYSRVDPMQNLV  S S
Sbjct: 448 RRVMADARIQKTPAYSRVDPMQNLVLVSPS 477

[Close]

BLAST of Spg007977 vs. ExPASy Swiss-Prot
Match: Q9SY75 (Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E71 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-78
Identity = 141/258 (54.65%), Postives = 195/258 (75.58%), Query Frame = 0


Query: 11  DVVASLTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVD 70
           +++ +  A   PNEAT+VSVLSSCAN D  G+   GK++H Y++  E  L+  +GTAL+D
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GKQIHGYVMSKEIILTTTLGTALLD 267

Query: 71  FYGKMGLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVT 130
            YGK G L  A T+F+Q+++++VCAWNA+IS+ ASNGR  +AL++F  MK   + PN +T
Sbjct: 268 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 327

Query: 131 FVAILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESM 190
            +AILTACAR KLV+LG+QLF S+ +++ I+P +EHY CVVDL+G+AGLL +A  FI+S+
Sbjct: 328 LLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 387

Query: 191 PFEPDASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAA 250
           PFEPDAS+LGALL ACKIH  TELGN VG++L+ +QPQHCG+YVAL++ NA    W+ A 
Sbjct: 388 PFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAE 447

Query: 251 VIRRVMADARIQKAAAYS 269
            +R+ M +A I+K  AYS
Sbjct: 448 KMRKAMIEAGIRKIPAYS 464

[Close]

BLAST of Spg007977 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.2e-55
Identity = 107/249 (42.97%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 23  NEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGSAR 82
           NE T V VLS+C++L   G L  G+ +H+++     +LS F+G AL++ Y + G +  AR
Sbjct: 254 NEFTAVCVLSACSDL---GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 313

Query: 83  TVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACARGK 142
            VF  M++++V ++N MIS  A +G   EA++ F +M   G RPN+VT VA+L AC+ G 
Sbjct: 314 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 373

Query: 143 LVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILGAL 202
           L+++GL++F SM   F++ P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG L
Sbjct: 374 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 433

Query: 203 LSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADARIQ 262
           LSACKIHG  ELG ++ +RL   +    G YV L+++ A + KW  +  IR  M D+ I+
Sbjct: 434 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 493

Query: 263 KAAAYSRVD 272
           K    S ++
Sbjct: 494 KEPGCSTIE 499

[Close]

BLAST of Spg007977 vs. ExPASy Swiss-Prot
Match: Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.7e-55
Identity = 106/250 (42.40%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 22  PNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGSA 81
           PNE T  SVLS+CA++   G L RG+ +H Y+I+N  +++   GT L+D Y K G L  A
Sbjct: 304 PNEKTLSSVLSACAHV---GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 363

Query: 82  RTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACARG 141
             VF ++  + V  W AMI+ FA++G   +A DLF  M    + PNEVTF+A+L+ACA G
Sbjct: 364 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 423

Query: 142 KLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILGA 201
            LVE G +LF SM   F++ P  +HY C+VDL G+ GLL EA   IE MP EP   + GA
Sbjct: 424 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 483

Query: 202 LLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADARI 261
           L  +C +H   ELG     R++ +QP H GRY  LA++ + ++ W+  A +R+ M D ++
Sbjct: 484 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 543

Query: 262 QKAAAYSRVD 272
            K+  +S ++
Sbjct: 544 VKSPGFSWIE 550

[Close]

BLAST of Spg007977 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.5e-54
Identity = 109/250 (43.60%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           +P+  +  + LS+CA L   G L +GK +H+Y+ +    +   +G  L+D Y K G +  
Sbjct: 244 EPDNVSLANALSACAQL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 303

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           A  VF  +K + V AW A+IS +A +G   EA+  F EM+  GI+PN +TF A+LTAC+ 
Sbjct: 304 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 363

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
             LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A I G
Sbjct: 364 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 423

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL AC+IH   ELG E+G  L+ + P H GRYV  A+I+A  +KW+ AA  RR+M +  
Sbjct: 424 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 483

Query: 261 IQKAAAYSRV 271
           + K    S +
Sbjct: 484 VAKVPGCSTI 490

[Close]

BLAST of Spg007977 vs. ExPASy Swiss-Prot
Match: O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.0e-54
Identity = 108/251 (43.03%), Postives = 159/251 (63.35%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KP+  +  SV+S+CANL   G+L + K +H+ I  N  +  + I  AL++ Y K G L +
Sbjct: 341 KPDVVSMFSVISACANL---GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 400

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
            R VF +M  R V +W++MI++ + +G  ++AL LFA MK E + PNEVTFV +L  C+ 
Sbjct: 401 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 460

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
             LVE G ++F SM+++++I P  EHY C+VDL G+A LLREA E IESMP   +  I G
Sbjct: 461 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 520

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           +L+SAC+IHG  ELG    +R+L ++P H G  V +++I A  ++W     IRRVM +  
Sbjct: 521 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 580

Query: 261 IQKAAAYSRVD 272
           + K    SR+D
Sbjct: 581 VFKEKGLSRID 588

[Close]

BLAST of Spg007977 vs. ExPASy TrEMBL
Match: A0A6J1ERE5 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita moschata OX=3662 GN=LOC111437118 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.1e-132
Identity = 238/262 (90.84%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEG+LSVFIGTALVDFYGKMGLLGS
Sbjct: 214 KPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           ARTVFNQMKNRE+CAWNAMISS +SNGRE EAL+LFA MK EGIRPNEVTFVAILTACAR
Sbjct: 274 ARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAEGIRPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDA++LG
Sbjct: 334 GKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDATVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL+AC IHGATELGNEVGRRLLVMQP+HCGRYV LASINAGAEKW+HAAVIRRVMADAR
Sbjct: 394 ALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRVMADAR 453

Query: 261 IQKAAAYSRVDPMQNLVPTSSS 283
           IQKA AYSRVDPMQNLVP SSS
Sbjct: 454 IQKAPAYSRVDPMQNLVPMSSS 475

[Close]

BLAST of Spg007977 vs. ExPASy TrEMBL
Match: A0A5D3C5L7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004380 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.6e-129
Identity = 235/267 (88.01%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 16  LTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKM 75
           ++ + KPNEATYVSVLSSCANLDAEGVLCRGKE+HAYIIRNEG+ SVFIGTAL+DFYGKM
Sbjct: 134 MSGSVKPNEATYVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGEFSVFIGTALIDFYGKM 193

Query: 76  GLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAIL 135
           GLLG ARTVFNQMK REVC WNAMISSFASN RETEALDLFA MKVEGI PNEVTFVAIL
Sbjct: 194 GLLGCARTVFNQMKKREVCTWNAMISSFASNSRETEALDLFATMKVEGIHPNEVTFVAIL 253

Query: 136 TACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPD 195
           TACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF+PD
Sbjct: 254 TACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFDPD 313

Query: 196 ASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRV 255
           AS+LGALLSACKIHGA ELGNEVGRRLLVMQP+HCGRYV LAS+NAGAEKWN AAVIR V
Sbjct: 314 ASVLGALLSACKIHGAIELGNEVGRRLLVMQPRHCGRYVTLASMNAGAEKWNRAAVIRSV 373

Query: 256 MADARIQKAAAYSRVDPMQNLVPTSSS 283
           MADARIQK  AYSRVDPMQNLV  S S
Sbjct: 374 MADARIQKTPAYSRVDPMQNLVLISPS 400

[Close]

BLAST of Spg007977 vs. ExPASy TrEMBL
Match: A0A0A0K5I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 9.6e-129
Identity = 236/270 (87.41%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 13  VASLTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFY 72
           V  ++ + KPNEATYVSVLSS ANLDAEGVLCRGKE+HAYIIRNEG+ SVFIGT L+DFY
Sbjct: 208 VMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEVHAYIIRNEGEFSVFIGTGLIDFY 267

Query: 73  GKMGLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFV 132
           GKMGLLG ARTVFNQMK REVC WNAMISSFASNGRETEALDLFA MKVEGI PNEVTFV
Sbjct: 268 GKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRETEALDLFATMKVEGIHPNEVTFV 327

Query: 133 AILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF 192
           AILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF
Sbjct: 328 AILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF 387

Query: 193 EPDASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVI 252
           +PDAS+LGALLSACKIHGATELGNEVGRRLL MQP+HCGRYV LAS+NAGAEKWN AAVI
Sbjct: 388 DPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRHCGRYVTLASMNAGAEKWNRAAVI 447

Query: 253 RRVMADARIQKAAAYSRVDPMQNLVPTSSS 283
           RRVMADARIQK  AYSRVDPMQNLV  S S
Sbjct: 448 RRVMADARIQKTPAYSRVDPMQNLVLVSPS 477

[Close]

BLAST of Spg007977 vs. ExPASy TrEMBL
Match: A0A6J1JN92 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxima OX=3661 GN=LOC111486006 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128
Identity = 234/262 (89.31%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEG+LS FIGTALVDFYGKMGLLGS
Sbjct: 214 KPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSAFIGTALVDFYGKMGLLGS 273

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           ARTVFNQMKNRE+CAWNAMISS +SNGR  EAL+LFA MKVEGIRPNEVTFVAILTACAR
Sbjct: 274 ARTVFNQMKNRELCAWNAMISSLSSNGRGREALELFASMKVEGIRPNEVTFVAILTACAR 333

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
           GKLVE GL+LFRSMSNDF IVPI EHYVC+VDLL KAGLLREATEFIESMPF+PDAS+LG
Sbjct: 334 GKLVESGLELFRSMSNDFLIVPIAEHYVCMVDLLAKAGLLREATEFIESMPFQPDASVLG 393

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL+AC IHGATELGNEVGRRLLVMQP+HCGRYV LASINA AEKW+ AAVIRRVMADAR
Sbjct: 394 ALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINARAEKWSRAAVIRRVMADAR 453

Query: 261 IQKAAAYSRVDPMQNLVPTSSS 283
           IQKA AYSRVDPMQNLVP SSS
Sbjct: 454 IQKAPAYSRVDPMQNLVPMSSS 475

[Close]

BLAST of Spg007977 vs. ExPASy TrEMBL
Match: A0A1S3C130 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo OX=3656 GN=LOC103495611 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 4.7e-128
Identity = 234/267 (87.64%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 16  LTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKM 75
           ++ + KPNEATYVSVLSSCANLDAEGVLCRGKE+HAYIIRNEG+ SVFIGTAL+DFYGKM
Sbjct: 209 MSGSVKPNEATYVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGEFSVFIGTALIDFYGKM 268

Query: 76  GLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAIL 135
           GLLG ARTVFNQMK REVC WNAMISSFASN RETEALDLFA MKVEGI PNEVTFVAIL
Sbjct: 269 GLLGCARTVFNQMKKREVCTWNAMISSFASNSRETEALDLFATMKVEGIHPNEVTFVAIL 328

Query: 136 TACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPD 195
           TACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATE IESMPF+PD
Sbjct: 329 TACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLREATEIIESMPFDPD 388

Query: 196 ASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRV 255
           AS+LGALLSACKIHGA ELGNEVGRRLLVMQP+HCGRYV LAS+NAGAEKWN AAVIR V
Sbjct: 389 ASVLGALLSACKIHGAIELGNEVGRRLLVMQPRHCGRYVTLASMNAGAEKWNRAAVIRSV 448

Query: 256 MADARIQKAAAYSRVDPMQNLVPTSSS 283
           MADARIQK  AYSRVDPMQNLV  S S
Sbjct: 449 MADARIQKTPAYSRVDPMQNLVLISPS 475

[Close]

BLAST of Spg007977 vs. TAIR 10
Match: AT1G10330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 8.1e-80
Identity = 141/258 (54.65%), Postives = 195/258 (75.58%), Query Frame = 0


Query: 11  DVVASLTATPKPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVD 70
           +++ +  A   PNEAT+VSVLSSCAN D  G+   GK++H Y++  E  L+  +GTAL+D
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GKQIHGYVMSKEIILTTTLGTALLD 267

Query: 71  FYGKMGLLGSARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVT 130
            YGK G L  A T+F+Q+++++VCAWNA+IS+ ASNGR  +AL++F  MK   + PN +T
Sbjct: 268 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 327

Query: 131 FVAILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESM 190
            +AILTACAR KLV+LG+QLF S+ +++ I+P +EHY CVVDL+G+AGLL +A  FI+S+
Sbjct: 328 LLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 387

Query: 191 PFEPDASILGALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAA 250
           PFEPDAS+LGALL ACKIH  TELGN VG++L+ +QPQHCG+YVAL++ NA    W+ A 
Sbjct: 388 PFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAE 447

Query: 251 VIRRVMADARIQKAAAYS 269
            +R+ M +A I+K  AYS
Sbjct: 448 KMRKAMIEAGIRKIPAYS 464

[Close]

BLAST of Spg007977 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-56
Identity = 107/249 (42.97%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 23  NEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGSAR 82
           NE T V VLS+C++L   G L  G+ +H+++     +LS F+G AL++ Y + G +  AR
Sbjct: 254 NEFTAVCVLSACSDL---GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 313

Query: 83  TVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACARGK 142
            VF  M++++V ++N MIS  A +G   EA++ F +M   G RPN+VT VA+L AC+ G 
Sbjct: 314 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 373

Query: 143 LVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILGAL 202
           L+++GL++F SM   F++ P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG L
Sbjct: 374 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 433

Query: 203 LSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADARIQ 262
           LSACKIHG  ELG ++ +RL   +    G YV L+++ A + KW  +  IR  M D+ I+
Sbjct: 434 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 493

Query: 263 KAAAYSRVD 272
           K    S ++
Sbjct: 494 KEPGCSTIE 499

[Close]

BLAST of Spg007977 vs. TAIR 10
Match: AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 215.7 bits (548), Expect = 4.8e-56
Identity = 106/250 (42.40%), Postives = 154/250 (61.60%), Query Frame = 0


Query: 22  PNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGSA 81
           PNE T  SVLS+CA++   G L RG+ +H Y+I+N  +++   GT L+D Y K G L  A
Sbjct: 304 PNEKTLSSVLSACAHV---GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 363

Query: 82  RTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACARG 141
             VF ++  + V  W AMI+ FA++G   +A DLF  M    + PNEVTF+A+L+ACA G
Sbjct: 364 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 423

Query: 142 KLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILGA 201
            LVE G +LF SM   F++ P  +HY C+VDL G+ GLL EA   IE MP EP   + GA
Sbjct: 424 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 483

Query: 202 LLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADARI 261
           L  +C +H   ELG     R++ +QP H GRY  LA++ + ++ W+  A +R+ M D ++
Sbjct: 484 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 543

Query: 262 QKAAAYSRVD 272
            K+  +S ++
Sbjct: 544 VKSPGFSWIE 550

[Close]

BLAST of Spg007977 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-55
Identity = 109/250 (43.60%), Postives = 155/250 (62.00%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           +P+  +  + LS+CA L   G L +GK +H+Y+ +    +   +G  L+D Y K G +  
Sbjct: 244 EPDNVSLANALSACAQL---GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 303

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
           A  VF  +K + V AW A+IS +A +G   EA+  F EM+  GI+PN +TF A+LTAC+ 
Sbjct: 304 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 363

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
             LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A I G
Sbjct: 364 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 423

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           ALL AC+IH   ELG E+G  L+ + P H GRYV  A+I+A  +KW+ AA  RR+M +  
Sbjct: 424 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 483

Query: 261 IQKAAAYSRV 271
           + K    S +
Sbjct: 484 VAKVPGCSTI 490

[Close]

BLAST of Spg007977 vs. TAIR 10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-55
Identity = 108/251 (43.03%), Postives = 159/251 (63.35%), Query Frame = 0


Query: 21  KPNEATYVSVLSSCANLDAEGVLCRGKELHAYIIRNEGDLSVFIGTALVDFYGKMGLLGS 80
           KP+  +  SV+S+CANL   G+L + K +H+ I  N  +  + I  AL++ Y K G L +
Sbjct: 341 KPDVVSMFSVISACANL---GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 400

Query: 81  ARTVFNQMKNREVCAWNAMISSFASNGRETEALDLFAEMKVEGIRPNEVTFVAILTACAR 140
            R VF +M  R V +W++MI++ + +G  ++AL LFA MK E + PNEVTFV +L  C+ 
Sbjct: 401 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 460

Query: 141 GKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASILG 200
             LVE G ++F SM+++++I P  EHY C+VDL G+A LLREA E IESMP   +  I G
Sbjct: 461 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 520

Query: 201 ALLSACKIHGATELGNEVGRRLLVMQPQHCGRYVALASINAGAEKWNHAAVIRRVMADAR 260
           +L+SAC+IHG  ELG    +R+L ++P H G  V +++I A  ++W     IRRVM +  
Sbjct: 521 SLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKN 580

Query: 261 IQKAAAYSRVD 272
           + K    SR+D
Sbjct: 581 VFKEKGLSRID 588

The following BLAST results are available for this feature:

BLAST of Spg007977 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589154.1	1.3e-132	91.60	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022930726.1	8.6e-132	90.84	putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita moscha...	[more]
XP_038887445.1	2.5e-131	92.58	putative pentatricopeptide repeat-containing protein At1g10330 [Benincasa hispid...	[more]
XP_023529509.1	6.8e-129	89.31	putative pentatricopeptide repeat-containing protein At1g10330 [Cucurbita pepo s...	[more]
XP_004144596.1	2.0e-128	87.41	putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis sativus]	[more]

BLAST of Spg007977 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY75	1.1e-78	54.65	Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis th...	[more]
Q9FIF7	5.2e-55	42.97	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]
Q9SX45	6.7e-55	42.40	Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	1.5e-54	43.60	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
O23337	2.0e-54	43.03	Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX...	[more]

BLAST of Spg007977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERE5	4.1e-132	90.84	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita mosc...	[more]
A0A5D3C5L7	9.6e-129	88.01	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A0A0K5I5	9.6e-129	87.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1	[more]
A0A6J1JN92	2.1e-128	89.31	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxi...	[more]
A0A1S3C130	4.7e-128	87.64	putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo O...	[more]

BLAST of Spg007977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10330.1	8.1e-80	54.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G59200.1	3.7e-56	42.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G50270.1	4.8e-56	42.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	1.1e-55	43.60	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G14820.1	1.4e-55	43.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 95..271 e-value: 1.6E-30 score: 108.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 93..140 e-value: 7.0E-13 score: 48.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 66..93 e-value: 0.003 score: 15.6 coord: 95..128 e-value: 2.0E-9 score: 35.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 166..190 e-value: 0.24 score: 11.7 coord: 66..91 e-value: 0.025 score: 14.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 92..126 score: 11.980759
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 18..272
None	No IPR available	PANTHER	PTHR47929:SF1	SUBFAMILY NOT NAMED	coord: 18..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg007977.1	Spg007977.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding