Spg005748 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAACCAGAGGGTATTTGGCCCGACCCATATGGTCGGCCTCATTCGACCATTCGGCTCGTCTGCGCGAGCCGAGCTCATCCGCCTCCGTTTGGTCCCTACTGCCCCTGGCCGCCCCGATTCCACCTGGTTCAGCCTGAAACACCTCCGAATTCTTAAAAACCCTAGGGCAAGAACATGTATTTAAACCCTTCTTCATCACTGAAGAAATGATCTCGAACTCTATTCTCAACTTCTCCTCTTGCTCTCTAGCTCTTCCATAAGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTACTACTTTGCAGGCCACGTCTTCTCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGATGAGTTTCTCCCGACCAAATTTGACCATCAACAATATACTTGGAGAATTGAGTGTTCAACGGTATAATGGAGGTCTCAACCCTATTTTTTTAATAAACCATTTTGATTTTGGTTTTTTGTTTTTGAAAGTTACCATTGTTTTATAAGTTTTTCACATCCCCTTAAAAACACATTTGAATTCTAAGTCAAATTTAAAAAACAAAGTAAAGTTTTTTTAAAAACTATCTTTTTTTAGTTTTCAAAATTTGATTTGATTTTTTAAAACATATTTTTAAAAGTAGATATAAAACAAGAAAACTAGAGATGCAAATAATGTTTATAAAATTTAATTTTCAAAAATAGAAATAAAATACAAAATGATTATATCAAACCAAGCCTTAACATTTATAATAGATATATAACGTCTTAATCAATTCAACTAATTGATTTGATTTAGTTGAAGAGGGAGAAGCAGTTAAAAGATTTTAGTTTGATATATGTATGTATTACGAACCGAAAGGCAAGCAAAAAACAGTGGCATGCAAAGTGGATTCAAATAAAAGATGACAAAAGAACAAGTCTTAAAAAATTGCATTATTGTAAAGTTGACACGAATTAATTAATACATCATAATGTGCATTAAATTAAAATGTAATTCCACTACCAAACCACACCAAACCAAATAATATAAATATTGTCAAAAAAAAAAAAACAAAATAATATAAAAAAGGAAAATGATAAATTTAATTGTTTTAAACTAAGGGGAAAAAACAACTTGTGCACTTAAACTAATCCCTATAATAATGCATGCCTTAATTAACAAACAAATAGCTCCAAAGACAAAGGCAAAACGAGGAGGGAAGACTAGACACATGTTGTCTCATGCATATATGTATTTAGAATAAACATTCAACAAAAAAACTATAGGCAAGATTTTTGGGAAAAATACCTTTTTGGTTTTTTGGTTCCTAAATTTTGAAGGATATATGGATTTGATTTCTAAGTTTTCAAAATAGACCTTTTAAGTTTCGTAGGTTTAAAAGGTTCCTAAGTTTTTAAAATGAGATCTTTTTAATTTTTGAGAAATAGGCTTAAAATGTCCTTCATATTATTTTTCATTTTTTTAAAAATTAATACTTTTTAATTTTTTTAATTGAAAAAACCATTTAATATTTAGAACTATTTTTCGTAAAAAATACCCAATCAAAAGTGATTTTAATTAGTCACTTAACCAAAGTATAGTTGTCCAATATAGATGAATTTAAAAAAAAAAAAAAAACATAGACATTTTAAAATAATAAACACCATAAATATATGTCAAAGCAGCCTAGCTCCCTGCGATAATTGACATATATACTCGACCAAGAGATCAGAAGTTCGAATCCCTCTACTCTCAAATGTTGATGTACTAAAAAAACACCATAAATATATAACCATATAAGTCTTAATTGTTTCGATAATGAATAAAACTTGGCTACATAGGTATGTACGATCTCCCTACATACCTCATTAAAATCTTGACAATTAAGAAAGAGGAAGGGAGAATTTTTTTTTTATCTCTCCCAGTTGTCAACATTTTAATGGTGGTATGCAGGGAGATCCCGAGGTATGCAACCAAATGTTTTCCTTCGATAATTATTCTCCTGGAGATGCCTACATATCGGTATGCAACTAACTTTTTTACGATATCCTTGTCTTGTAGTGAAGCGAAACTCTAGGCTACAAAGTGGAGTGCTTTGGATGCAATCTTTGTCTCTTACTGTCATACGTAGGCACTCCAACTGTATATAAAAGGATCCACATAGGCCTACAAAATCTCAACACCAATTCATTCCCATTTCCCGGCCCGTTCTCGGTTTCTCCGGCGAACATTTATTTAATTCAACCGGCCCTCCGGCAGTCGCTAGTCGGAATTTCGAAACTGGCAAACTCAGAGTCGTCGTCGGAGCAGAAGGACAGCGTCGCGAGAGTGAGGGCACTTTACGAGGCGTTGGGCTCCAAAGACGCGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCGTCCTCCTCCTTCGTCTTCGCACCGGTCTCCGTCGTGGCATTTGGGCCCACCGTCCTCGCCGAAGGCTACGACACGAAACGCGCCGTTTCGTGGGTCCACGCGTGGACAGTTACTGATGGGGTTATTACCCACGTCAAGGAGTATCTCAACACTTCGGTTACTGTCAAGCGCTTCGCCACCGCTGCCGACGGGGACTCGCCGTCCGCATCGCCGCCGGCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGCGGGGAGTCGGTGCCTGGTCTTGTTTTGGCAATTTAG ATGAACAAACCAGAGGGTATTTGGCCCGACCCATATGGTCGGCCTCATTCGACCATTCGGCTCGTCTGCGCGAGCCGAGCTCATCCGCCTCCGTTTGGTCCCTACTGCCCCTGGCCGCCCCGATTCCACCTGCTCTTCCATAAGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTACTACTTTGCAGGCCACGTCTTCTCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGATGAGTTTCTCCCGACCAAATTTGACCATCAACAATATACTTGGAGAATTGAGTGTTCAACGGGAGATCCCGAGCGAAACTCTAGGCTACAAAGTGGAGTGCTTTGGATGCAATCTTTGTCTCTTACTGTCATACGTAGGCACTCCAACTGTATATAAAAGGATCCACATAGGCCTACAAAATCTCAACACCAATTCATTCCCATTTCCCGGCCCGTTCTCGGTTTCTCCGGCGAACATTTATTTAATTCAACCGGCCCTCCGGCAGTCGCTAGTCGGAATTTCGAAACTGGCAAACTCAGAGTCGTCGTCGGAGCAGAAGGACAGCGTCGCGAGAGTGAGGGCACTTTACGAGGCGTTGGGCTCCAAAGACGCGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCGTCCTCCTCCTTCGTCTTCGCACCGGTCTCCGTCGTGGCATTTGGGCCCACCGTCCTCGCCGAAGGCTACGACACGAAACGCGCCGTTTCGTGGGTCCACGCGTGGACAGTTACTGATGGGGTTATTACCCACGTCAAGGAGTATCTCAACACTTCGGTTACTGTCAAGCGCTTCGCCACCGCTGCCGACGGGGACTCGCCGTCCGCATCGCCGCCGGCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGCGGGGAGTCGGTGCCTGGTCTTGTTTTGGCAATTTAG ATGAACAAACCAGAGGGTATTTGGCCCGACCCATATGGTCGGCCTCATTCGACCATTCGGCTCGTCTGCGCGAGCCGAGCTCATCCGCCTCCGTTTGGTCCCTACTGCCCCTGGCCGCCCCGATTCCACCTGCTCTTCCATAAGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTACTACTTTGCAGGCCACGTCTTCTCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGATGAGTTTCTCCCGACCAAATTTGACCATCAACAATATACTTGGAGAATTGAGTGTTCAACGGGAGATCCCGAGCGAAACTCTAGGCTACAAAGTGGAGTGCTTTGGATGCAATCTTTGTCTCTTACTGTCATACGTAGGCACTCCAACTGTATATAAAAGGATCCACATAGGCCTACAAAATCTCAACACCAATTCATTCCCATTTCCCGGCCCGTTCTCGGTTTCTCCGGCGAACATTTATTTAATTCAACCGGCCCTCCGGCAGTCGCTAGTCGGAATTTCGAAACTGGCAAACTCAGAGTCGTCGTCGGAGCAGAAGGACAGCGTCGCGAGAGTGAGGGCACTTTACGAGGCGTTGGGCTCCAAAGACGCGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCGTCCTCCTCCTTCGTCTTCGCACCGGTCTCCGTCGTGGCATTTGGGCCCACCGTCCTCGCCGAAGGCTACGACACGAAACGCGCCGTTTCGTGGGTCCACGCGTGGACAGTTACTGATGGGGTTATTACCCACGTCAAGGAGTATCTCAACACTTCGGTTACTGTCAAGCGCTTCGCCACCGCTGCCGACGGGGACTCGCCGTCCGCATCGCCGCCGGCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGCGGGGAGTCGGTGCCTGGTCTTGTTTTGGCAATTTAG MNKPEGIWPDPYGRPHSTIRLVCASRAHPPPFGPYCPWPPRFHLLFHKFSDLSIGGGVASTTPVCRFTTLQATSSPSHTNLPLVAREGQMSFSRPNLTINNILGELSVQREIPSETLGYKVECFGCNLCLLLSYVGTPTVYKRIHIGLQNLNTNSFPFPGPFSVSPANIYLIQPALRQSLVGISKLANSESSSEQKDSVARVRALYEALGSKDAETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSSFVFAPVSVVAFGPTVLAEGYDTKRAVSWVHAWTVTDGVITHVKEYLNTSVTVKRFATAADGDSPSASPPANCQSVWQSKVCGESVPGLVLAI Homology
BLAST of Spg005748 vs. NCBI nr
Match: KAG7037026.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.1 bits (723), Expect = 3.2e-72 Identity = 144/173 (83.24%), Postives = 153/173 (88.44%), Query Frame = 0
BLAST of Spg005748 vs. NCBI nr
Match: KAG6607351.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283.1 bits (723), Expect = 3.2e-72 Identity = 144/173 (83.24%), Postives = 153/173 (88.44%), Query Frame = 0
BLAST of Spg005748 vs. NCBI nr
Match: KAA0059984.1 (putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa]) HSP 1 Score: 259.6 bits (662), Expect = 3.7e-65 Identity = 134/174 (77.01%), Postives = 150/174 (86.21%), Query Frame = 0
BLAST of Spg005748 vs. NCBI nr
Match: XP_010257123.1 (PREDICTED: uncharacterized protein LOC104597350 [Nelumbo nucifera]) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-48 Identity = 112/208 (53.85%), Postives = 142/208 (68.27%), Query Frame = 0
BLAST of Spg005748 vs. NCBI nr
Match: RVX22713.1 (Wound-induced protein 1 [Vitis vinifera]) HSP 1 Score: 197.2 bits (500), Expect = 2.3e-46 Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.4e-24 Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.4e-19 Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy TrEMBL
Match: A0A5A7UY51 (Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00340 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65 Identity = 134/174 (77.01%), Postives = 150/174 (86.21%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy TrEMBL
Match: A0A1U7ZU64 (uncharacterized protein LOC104597350 OS=Nelumbo nucifera OX=4432 GN=LOC104597350 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 5.3e-49 Identity = 112/208 (53.85%), Postives = 142/208 (68.27%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy TrEMBL
Match: A0A438KNE8 (Wound-induced protein 1 OS=Vitis vinifera OX=29760 GN=WUN1 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46 Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy TrEMBL
Match: F6GUH4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07550 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 3.2e-46 Identity = 104/170 (61.18%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of Spg005748 vs. ExPASy TrEMBL
Match: A0A2N9EI45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 7.2e-46 Identity = 105/171 (61.40%), Postives = 126/171 (73.68%), Query Frame = 0
BLAST of Spg005748 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 113.6 bits (283), Expect = 3.1e-25 Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Spg005748 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 100.1 bits (248), Expect = 3.5e-21 Identity = 62/148 (41.89%), Postives = 85/148 (57.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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