Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAGAAGTTTCGTCGTTCTCTTTCTTCTCCTCGCGTTGGTAGCTTCTTCGGCTACGGCGGCGCATCATCACTCGCACCCGAAGTCGCCGGCGCCGGCGCCTTCACCGGTCGCCGTGGAAGCTCCGTCGGTTCCACCGTCGTCGATTGCCGGAACTCCTATTGAGGCGCCTGCACCGGCGGCGAGCGGCGCCGGTTTTGCTTCGGGATTTGGTGTTGCTGGATCAATGGCTGTTGGTGTTGGAATCTTTGCTGCTGCTTTGTTCGTTTAG
mRNA sequence
ATGGCTTCCAGAAGTTTCGTCGTTCTCTTTCTTCTCCTCGCGTTGGTAGCTTCTTCGGCTACGGCGGCGCATCATCACTCGCACCCGAAGTCGCCGGCGCCGGCGCCTTCACCGGTCGCCGTGGAAGCTCCGTCGGTTCCACCGTCGTCGATTGCCGGAACTCCTATTGAGGCGCCTGCACCGGCGGCGAGCGGCGCCGGTTTTGCTTCGGGATTTGGTGTTGCTGGATCAATGGCTGTTGGTGTTGGAATCTTTGCTGCTGCTTTGTTCGTTTAG
Coding sequence (CDS)
ATGGCTTCCAGAAGTTTCGTCGTTCTCTTTCTTCTCCTCGCGTTGGTAGCTTCTTCGGCTACGGCGGCGCATCATCACTCGCACCCGAAGTCGCCGGCGCCGGCGCCTTCACCGGTCGCCGTGGAAGCTCCGTCGGTTCCACCGTCGTCGATTGCCGGAACTCCTATTGAGGCGCCTGCACCGGCGGCGAGCGGCGCCGGTTTTGCTTCGGGATTTGGTGTTGCTGGATCAATGGCTGTTGGTGTTGGAATCTTTGCTGCTGCTTTGTTCGTTTAG
Protein sequence
MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPAPAASGAGFASGFGVAGSMAVGVGIFAAALFV
Homology
BLAST of Spg004064 vs. NCBI nr
Match:
KGN43805.2 (hypothetical protein Csa_017194, partial [Cucumis sativus])
HSP 1 Score: 118.2 bits (295), Expect = 3.6e-23
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+VL L+LALVASSATA HHHSHPKSPAPAPSP VEAPSVPPSSI+GTP+EAPA
Sbjct: 90 MASRSFLVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVEAPSVPPSSISGTPVEAPA 149
Query: 61 PAASGAGFASGFGVAGSMAVGVGI-FAAALFV 92
PAA+GAG V+GSMAV VGI FAAALFV
Sbjct: 150 PAANGAGL-----VSGSMAVSVGIFFAAALFV 176
BLAST of Spg004064 vs. NCBI nr
Match:
XP_023554722.1 (uncharacterized protein LOC111811901 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 93.6 bits (231), Expect = 9.5e-16
Identity = 63/90 (70.00%), Postives = 69/90 (76.67%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+V+ LL+ALVAS A A HHH+H KSPAPAPSPV EAP P A +P+ APA
Sbjct: 1 MASRSFLVVLLLVALVASPAMAGHHHTHSKSPAPAPSPVVSEAPLAP----APSPVSAPA 60
Query: 61 PAASGAGFASGFGVAGSMAVGVGIFAAALF 91
PA SGAG G G AGSMAVGVGIFAAALF
Sbjct: 61 PAESGAG-VIGTGFAGSMAVGVGIFAAALF 85
BLAST of Spg004064 vs. NCBI nr
Match:
KAG6571852.1 (hypothetical protein SDJN03_28580, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 90.5 bits (223), Expect = 8.0e-15
Identity = 62/90 (68.89%), Postives = 68/90 (75.56%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+V+ LL+ALVAS A A HHH+H KSPAPAPSPV EA P A +P+ APA
Sbjct: 1 MASRSFLVVLLLVALVASPAMAGHHHTHSKSPAPAPSPVVSEASLAP----APSPVSAPA 60
Query: 61 PAASGAGFASGFGVAGSMAVGVGIFAAALF 91
PA SGAG G G AGSMAVGVGIFAAALF
Sbjct: 61 PAESGAG-VIGTGFAGSMAVGVGIFAAALF 85
BLAST of Spg004064 vs. NCBI nr
Match:
XP_022952911.1 (STE20/SPS1-related proline-alanine-rich protein kinase-like [Cucurbita moschata])
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+V LL+ALVAS A A HHH+H KSPAPAPSPV EA P A +P+ APA
Sbjct: 1 MASRSFLVALLLVALVASPAMAGHHHTHSKSPAPAPSPVVSEASLAP----APSPVSAPA 60
Query: 61 PAASGAGFASGFGVAGSMAVGVGIFAAALF 91
PA SGAG G G AGSMAVGVGIFAAALF
Sbjct: 61 PAESGAG-VIGTGFAGSMAVGVGIFAAALF 85
BLAST of Spg004064 vs. ExPASy TrEMBL
Match:
A0A0A0K427 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064050 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 1.7e-23
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+VL L+LALVASSATA HHHSHPKSPAPAPSP VEAPSVPPSSI+GTP+EAPA
Sbjct: 1 MASRSFLVLLLVLALVASSATAGHHHSHPKSPAPAPSPAVVEAPSVPPSSISGTPVEAPA 60
Query: 61 PAASGAGFASGFGVAGSMAVGVGI-FAAALFV 92
PAA+GAG V+GSMAV VGI FAAALFV
Sbjct: 61 PAANGAGL-----VSGSMAVSVGIFFAAALFV 87
BLAST of Spg004064 vs. ExPASy TrEMBL
Match:
A0A6J1GLJ6 (STE20/SPS1-related proline-alanine-rich protein kinase-like OS=Cucurbita moschata OX=3662 GN=LOC111455452 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.6e-15
Identity = 62/90 (68.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query: 1 MASRSFVVLFLLLALVASSATAAHHHSHPKSPAPAPSPVAVEAPSVPPSSIAGTPIEAPA 60
MASRSF+V LL+ALVAS A A HHH+H KSPAPAPSPV EA P A +P+ APA
Sbjct: 1 MASRSFLVALLLVALVASPAMAGHHHTHSKSPAPAPSPVVSEASLAP----APSPVSAPA 60
Query: 61 PAASGAGFASGFGVAGSMAVGVGIFAAALF 91
PA SGAG G G AGSMAVGVGIFAAALF
Sbjct: 61 PAESGAG-VIGTGFAGSMAVGVGIFAAALF 85
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN43805.2 | 3.6e-23 | 80.43 | hypothetical protein Csa_017194, partial [Cucumis sativus] | [more] |
XP_023554722.1 | 9.5e-16 | 70.00 | uncharacterized protein LOC111811901 [Cucurbita pepo subsp. pepo] | [more] |
KAG6571852.1 | 8.0e-15 | 68.89 | hypothetical protein SDJN03_28580, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022952911.1 | 1.4e-14 | 68.89 | STE20/SPS1-related proline-alanine-rich protein kinase-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K427 | 1.7e-23 | 80.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064050 PE=4 SV=1 | [more] |
A0A6J1GLJ6 | 6.6e-15 | 68.89 | STE20/SPS1-related proline-alanine-rich protein kinase-like OS=Cucurbita moschat... | [more] |
Match Name | E-value | Identity | Description | |