Spg003368 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003368
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 44703870 .. 44707835 (-)
RNA-Seq Expression	Spg003368
Synteny	Spg003368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGTAAGAGGAGAGAGTCGAGAGTTCCGGGTCCCTTCTTCAGTGGCAAAGAGGGGTATAAATACCTGCTCATGCTCCTAGGATTTTTAGGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGGTCCAAAATTACCTATAACAATATGCATTAAGACATGAAAGGTTCTTTTTTGTGTTATGGTATCTTGATTATAATATTTGCATGTGCCTTTCTTTCTTTAGATTTTTTTTTCACATTTTTCATTTCTCTCTTCCTTTTTAACCCCTTGTAGGATTTCTAGTGAAGTTACCAGTTTGGGTTTATGATTTTCAATTTATTTTTGTCTAATAGGTAATTGTGGTTAATTCGAGCAGTAAGTTAACATTAACACCCCATCAACACATTTGAATTAACTTGAAACCAACTTTTATGTAATCCTAATACTAGCTTAGCTTGTAGATACAAAATTGATAGTTTAAGATCTGTTAACATTTAAAACACAAGGATTAGGCATACTTAATCCTTGAAAGTTTTAGGTCTAATTACAAATTTCTTAAAGCCTAAGACTAAATAGATAACCCTCTCAAAGTTTATCAACCCAAACTTCTAATCTAACAGTTCTTTAAATACTACTCATTATAAATTGATACATGGTAAATGAAAACGAATATTCAAACTTAACTATATGCATATTCTATGTTTCGGTTAGGGGTGATAGTCGGTTCGGTTCTCTCGGTTTTGAGCCCAACCGAAAACCGAACCGAACCGTTCGGTTTGTTCAAAATGAAAACTGAACCAATGTCCAATAAATGATAAAACCAATGGTTCGGTTTCCTATTGGTTTGGTTTTCGGTTTCAGCCTTAATTTCCTTAACTTTTCTCTACTCCTCTGATTGAGCTTTTAAAATACATCAATGGCTACACACTTTCAAGTACAGAGATTGGGAAGGAGAGAATACAAGCAATAGAGGGTTTGGAATGAATTATAAATCAACACCCAATGGATTGCAATGAAAAAAAATCAAGCAAAGCCTTGAGTACCATCTTTTTAAAATAATTAATCAAATCACAAGTTTAGTTTATTTACCTAATATGGCTGGGAATGGGAGAATGGCGCCCAGAGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGTGATCAGCGAAGATAGAAGTGATTGGAGAAGATGGCTGTAAAGCTGCGGTTGGGAATGAAGAATGGGTGAATTGAAAAAGGGATTAGGGTTTTTTAAGGGTATATATATAGCCTCGGTTCGGTTCGGTTTTTAGTTGGTTTTTTCAATAGGAAACCGAACCGAACCGAAAATGGTCGGTTTTTTTCAAAACACAAACCGAGATGTCCAATCTAATGCCAAAAAACCGAACCAAACCATTGGATCGACTTGGTTCGGTTCGGTTTTTCGGTTCTTCGGTTTTCAGTTGCACCCTTAGTTTCGGTAGGGTTATTGTTGAATGGATGCCATAATTCAGGTTGCGACTACTGAGTATATGTTAACCATGTTAACGAATTTGGGAGTGAAAATTTTGCTACAATTGGATTTTATTCAATAATAAATTACTCTTAAGGCTGGTTCTTAGCTATATGATAAAATATTGTAATTTTATAATTAGTAGTTTCTACATTTAAAAGCTAACTAAATTATCTTAGTAGTAGGACAATACTATTTTATTTTTATGAAAGCAAATCAATCAAACATAATTGCAGAGATCTCAATACCGTTCATCCCTTTCTTTTAAATGTTTAAAAATATGGAAATGGAAGGTTTGTTTTAGGTTTTGAGGCTTAGAACTTGATCCGATAAGAGGCTTTCATGGCTATTCCACACATTCCTTTTGGATCCTCCCCACTCCTTTTTTAGTTTCATCTAAACGTAACCCTTCCTCTCCCCAACTAACTCCCCATGAATTCTTCACGAGCCAATAATTTGTTCCGTCTTCAGTTGTCTTGTAGCCAATCGCTACCACTCCGTGATTAAGCTCTGTTCCACATTCTCCATTGAATACTCCCTGCAATTTAGCCACAGATTTTCAATTATGATATGATGATGCAAGTTCACCGTGAAGCGATCAATTGCGAAACTGAACCAGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTACGTTTTCATATCCATCAATTGTAACTATCAGTGAAGTCATATGCTAAGTCAAATAAATGTGTGCTTTTAGTTTGATAATTTCCAAAAGGATGAATGATATTTTAGATTCGAATTGCTTCATGCAGTTAGATGAATTCTAAAATTGAACTCTAGATGAGTGGCAGAATCCTCATGCACCGTGGTAGGGATAGTTGTTCTTTCGGTGGCGATTCCACCATTTCGCCCTATGAAATCAAAAGCGATCTCCATGAACCCTCCATTACAACCAATGTTTCTTGTATTGCAGTCGAGAAACTCCTGCTCTGATAGAGATAATAGCTAGTTGATTTTGATTTCGTTAATTCCTTCAACTGCAACCATAGTTGAAAACGCCCAACAGCAACCTGCAATATATTTCAAAATCATTGATTATTCGTCATTTCATAATTAATTAAAGTATATTATAGTGCTTCTCATTGACATTGTAAGCACTAATTTGTTGTAATCTAGTAAATATAGAACACTCAAAACTATTAAATGTTGTGTTGTAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAGGAAAATGTATTTAAACCCTTCTTCGTCACTGAAGAAGGGATCCCGAACTTAATTCTCTGAACTCTACTTCTCCTCTTGCTCTTTTGCTCTCCTCCTTCAACTTTCTGACTTAAGCATCAGAGGCGGTGTAGCCAAGCACCACACCGGTGCGCAGGTTTCTTCTGTCTTGCAGGCCACGTCTTCCCCCTCTTCAAACAAATTTATCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTTCCCTGTCCAGATATTGGCATCAACATGTTGTTTTTAGTTATAAACTCCTTTTTCCTCGATCAATATAACGCCAGAATTAGACATTATATACCGCATCTGCCTTGCTCTGTGATGCCATTGACGACTCCTCTCTCCCTCCAATCAGTGATTGTTGGAAGAACTGTAGCCTGCTCATACATGAATCCACTGACACCTTCTCTTCTCCAGCCATGCAACTTCCTGTAGTGACTAATATTGGACCGAACATACAAGTTTACAAACTCATAATTGGACATATCTGCAAACTTGTTGAACTTCAACTTGTATGGTTTGGTGATATTGGTCAAAGTATAGGTCACTTACAAACGTCATTAGGAAAAAAAAACACTCACTTCAGAGTGTTGTAGCTCTTTCAACAACTAAAGCTGAATTTATTGTGTTATTAATTAGAAGCAATAAAAGAAGTTATTTG

mRNA sequence

AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAG

Coding sequence (CDS)

AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAG

Protein sequence

NLFESGGRRDLQKSKSAHRCGASHTASDAQVRKRKRRAREDSEAFRDEPGWTGAARDSRDRAEAFWPGPLASLPLGRFLVLSPPGCPRQLLAYGVLSTKEYSAIVMVIEEDGSDRWQKGRWQWSLGLSRIGNFFLQRRCRLTLIGLRRLGSEHSPFQVILNHSEIRGLSRTMRHQPRSMTRKWTPEEGEPKGLGQDDPISCSAHSCGSSLLPSTRSLVPLDAPVPPGSARIVSESLETLR

Homology

The following BLAST results are available for this feature:

BLAST of Spg003368 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003368 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003368 vs.


Match Name	E-value	Identity	Description

BLAST of Spg003368 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003368.1	Spg003368.1	mRNA