Spg003368 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg003368
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 44703870 .. 44707835 (-)
RNA-Seq ExpressionSpg003368
SyntenySpg003368
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGTAAGAGGAGAGAGTCGAGAGTTCCGGGTCCCTTCTTCAGTGGCAAAGAGGGGTATAAATACCTGCTCATGCTCCTAGGATTTTTAGGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGGTCCAAAATTACCTATAACAATATGCATTAAGACATGAAAGGTTCTTTTTTGTGTTATGGTATCTTGATTATAATATTTGCATGTGCCTTTCTTTCTTTAGATTTTTTTTTCACATTTTTCATTTCTCTCTTCCTTTTTAACCCCTTGTAGGATTTCTAGTGAAGTTACCAGTTTGGGTTTATGATTTTCAATTTATTTTTGTCTAATAGGTAATTGTGGTTAATTCGAGCAGTAAGTTAACATTAACACCCCATCAACACATTTGAATTAACTTGAAACCAACTTTTATGTAATCCTAATACTAGCTTAGCTTGTAGATACAAAATTGATAGTTTAAGATCTGTTAACATTTAAAACACAAGGATTAGGCATACTTAATCCTTGAAAGTTTTAGGTCTAATTACAAATTTCTTAAAGCCTAAGACTAAATAGATAACCCTCTCAAAGTTTATCAACCCAAACTTCTAATCTAACAGTTCTTTAAATACTACTCATTATAAATTGATACATGGTAAATGAAAACGAATATTCAAACTTAACTATATGCATATTCTATGTTTCGGTTAGGGGTGATAGTCGGTTCGGTTCTCTCGGTTTTGAGCCCAACCGAAAACCGAACCGAACCGTTCGGTTTGTTCAAAATGAAAACTGAACCAATGTCCAATAAATGATAAAACCAATGGTTCGGTTTCCTATTGGTTTGGTTTTCGGTTTCAGCCTTAATTTCCTTAACTTTTCTCTACTCCTCTGATTGAGCTTTTAAAATACATCAATGGCTACACACTTTCAAGTACAGAGATTGGGAAGGAGAGAATACAAGCAATAGAGGGTTTGGAATGAATTATAAATCAACACCCAATGGATTGCAATGAAAAAAAATCAAGCAAAGCCTTGAGTACCATCTTTTTAAAATAATTAATCAAATCACAAGTTTAGTTTATTTACCTAATATGGCTGGGAATGGGAGAATGGCGCCCAGAGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGTGATCAGCGAAGATAGAAGTGATTGGAGAAGATGGCTGTAAAGCTGCGGTTGGGAATGAAGAATGGGTGAATTGAAAAAGGGATTAGGGTTTTTTAAGGGTATATATATAGCCTCGGTTCGGTTCGGTTTTTAGTTGGTTTTTTCAATAGGAAACCGAACCGAACCGAAAATGGTCGGTTTTTTTCAAAACACAAACCGAGATGTCCAATCTAATGCCAAAAAACCGAACCAAACCATTGGATCGACTTGGTTCGGTTCGGTTTTTCGGTTCTTCGGTTTTCAGTTGCACCCTTAGTTTCGGTAGGGTTATTGTTGAATGGATGCCATAATTCAGGTTGCGACTACTGAGTATATGTTAACCATGTTAACGAATTTGGGAGTGAAAATTTTGCTACAATTGGATTTTATTCAATAATAAATTACTCTTAAGGCTGGTTCTTAGCTATATGATAAAATATTGTAATTTTATAATTAGTAGTTTCTACATTTAAAAGCTAACTAAATTATCTTAGTAGTAGGACAATACTATTTTATTTTTATGAAAGCAAATCAATCAAACATAATTGCAGAGATCTCAATACCGTTCATCCCTTTCTTTTAAATGTTTAAAAATATGGAAATGGAAGGTTTGTTTTAGGTTTTGAGGCTTAGAACTTGATCCGATAAGAGGCTTTCATGGCTATTCCACACATTCCTTTTGGATCCTCCCCACTCCTTTTTTAGTTTCATCTAAACGTAACCCTTCCTCTCCCCAACTAACTCCCCATGAATTCTTCACGAGCCAATAATTTGTTCCGTCTTCAGTTGTCTTGTAGCCAATCGCTACCACTCCGTGATTAAGCTCTGTTCCACATTCTCCATTGAATACTCCCTGCAATTTAGCCACAGATTTTCAATTATGATATGATGATGCAAGTTCACCGTGAAGCGATCAATTGCGAAACTGAACCAGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTACGTTTTCATATCCATCAATTGTAACTATCAGTGAAGTCATATGCTAAGTCAAATAAATGTGTGCTTTTAGTTTGATAATTTCCAAAAGGATGAATGATATTTTAGATTCGAATTGCTTCATGCAGTTAGATGAATTCTAAAATTGAACTCTAGATGAGTGGCAGAATCCTCATGCACCGTGGTAGGGATAGTTGTTCTTTCGGTGGCGATTCCACCATTTCGCCCTATGAAATCAAAAGCGATCTCCATGAACCCTCCATTACAACCAATGTTTCTTGTATTGCAGTCGAGAAACTCCTGCTCTGATAGAGATAATAGCTAGTTGATTTTGATTTCGTTAATTCCTTCAACTGCAACCATAGTTGAAAACGCCCAACAGCAACCTGCAATATATTTCAAAATCATTGATTATTCGTCATTTCATAATTAATTAAAGTATATTATAGTGCTTCTCATTGACATTGTAAGCACTAATTTGTTGTAATCTAGTAAATATAGAACACTCAAAACTATTAAATGTTGTGTTGTAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAGGAAAATGTATTTAAACCCTTCTTCGTCACTGAAGAAGGGATCCCGAACTTAATTCTCTGAACTCTACTTCTCCTCTTGCTCTTTTGCTCTCCTCCTTCAACTTTCTGACTTAAGCATCAGAGGCGGTGTAGCCAAGCACCACACCGGTGCGCAGGTTTCTTCTGTCTTGCAGGCCACGTCTTCCCCCTCTTCAAACAAATTTATCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTTCCCTGTCCAGATATTGGCATCAACATGTTGTTTTTAGTTATAAACTCCTTTTTCCTCGATCAATATAACGCCAGAATTAGACATTATATACCGCATCTGCCTTGCTCTGTGATGCCATTGACGACTCCTCTCTCCCTCCAATCAGTGATTGTTGGAAGAACTGTAGCCTGCTCATACATGAATCCACTGACACCTTCTCTTCTCCAGCCATGCAACTTCCTGTAGTGACTAATATTGGACCGAACATACAAGTTTACAAACTCATAATTGGACATATCTGCAAACTTGTTGAACTTCAACTTGTATGGTTTGGTGATATTGGTCAAAGTATAGGTCACTTACAAACGTCATTAGGAAAAAAAAACACTCACTTCAGAGTGTTGTAGCTCTTTCAACAACTAAAGCTGAATTTATTGTGTTATTAATTAGAAGCAATAAAAGAAGTTATTTG

mRNA sequence

AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAG

Coding sequence (CDS)

AATTTGTTTGAGAGCGGGGGAAGACGTGACCTGCAAAAGAGTAAATCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTCAAGTCAGAAAACGGAAGAGAAGAGCAAGAGAGGATTCGGAGGCGTTTCGGGACGAACCAGGCTGGACCGGGGCGGCTAGGGATAGTAGGGACCGAGCGGAGGCGTTTTGGCCCGGCCCGTTGGCTAGTCTTCCTCTGGGTCGCTTCCTGGTCCTATCTCCGCCCGGTTGTCCTCGTCAACTCCTTGCATATGGTGTCTTATCGACAAAAGAGTATAGTGCGATTGTTATGGTGATTGAAGAAGATGGCAGTGACCGGTGGCAAAAAGGGCGATGGCAATGGAGCTTAGGTCTGAGTAGAATTGGTAATTTTTTTCTGCAACGTCGATGTCGACTAACACTGATTGGTTTGCGACGACTTGGATCAGAACATTCTCCTTTTCAGGTGATTTTAAACCATTCCGAAATTCGAGGACTAAGCAGAACAATGCGACACCAACCCAGAAGCATGACCAGGAAGTGGACCCCAGAGGAGGGTGAGCCGAAGGGATTGGGCCAAGACGACCCAATCTCATGCTCGGCTCACTCGTGTGGGTCGAGTCTCCTCCCATCCACTCGGTCCCTGGTGCCCCTAGACGCCCCGGTTCCGCCTGGTTCAGCCCGAATTGTCTCCGAAAGCCTAGAAACCCTAAGGTAG

Protein sequence

NLFESGGRRDLQKSKSAHRCGASHTASDAQVRKRKRRAREDSEAFRDEPGWTGAARDSRDRAEAFWPGPLASLPLGRFLVLSPPGCPRQLLAYGVLSTKEYSAIVMVIEEDGSDRWQKGRWQWSLGLSRIGNFFLQRRCRLTLIGLRRLGSEHSPFQVILNHSEIRGLSRTMRHQPRSMTRKWTPEEGEPKGLGQDDPISCSAHSCGSSLLPSTRSLVPLDAPVPPGSARIVSESLETLR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg003368.1Spg003368.1mRNA