Spg003366 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003366
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold4: 48864840 .. 48866216 (-)
RNA-Seq Expression	Spg003366
Synteny	Spg003366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCGATTCCTTCTCAGGCCACTCGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCATCCCAATTCACTCTCCTGCTGTCAAATCCTTCCGGCCGACGTCCTTGTGCACTAATGCTCTCTCCAATTCCCGCAATCGGAAGGCGGCTCGCTCGTACGACGGCCAAAGCTCGACGAACACTCTCTCGAAATCTCAGAACCAGACGACCGATTCAGTTTTTGGACTTCCGTCTGCGGTGGATTTAGTGGCTCTATGCGAAGAGGGTAAGGTAATGGATGCTCTGGAATGTATTGGCCAAGGTGGTAATGTTGATTATGGTGTTTTTACTGCTTTGTTGAATTCTTGTGGGAATTTGAAGTTGCTTGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGTGGAATTGAACAATAAATTGATTGAAGTGTACTCGAGTTGTGGCTGTATGAAAGATGCACGTAGGGTGTTCGATAAAATGCCTGACAGGGATACATGGACTTGGAATTTAATGATCAAGGGGTATGGAGAGAATGGTGAAGGAGATCATGGGTTGGCTTTGTTTGAGCAAATGAAGAATGTGGGATTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCAGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTATATTTTACTTTAACTCAATGGAAAATGAATATGGAATCAATCCTGAAATTGGACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGACATTTGATTGAAGCAGAGGAGTTCATTGAGAACATGTCCATCAATCCCACAGCCAAAATCTGGGATGCCCTTAGAAACTACGCTCAACTCCATGGAAACATGGAGCTTGAAGATCGAGCCGAGGAGTTGATGTTCTCTCTGGACCCGTCCATGGCAGCCACAGCTGCCAACCCACCGCTCCCTCTGCCAAGAAAGCAATCAGCAACCAACATGTTGGAGGAGAAGGATAGAGTGAGGGAGTTTAGATGTGCAATGCCTTACAAAGAAGAGGGTGAAGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGCTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCTAAACAGCAGGCTTTGCAATACCATAGCGAGCGGTTGGCCATTGCTTATGGATTGATCAGTACACCAGCGAGAACGACGCTGAGGATCATCAAGAATCTTCGGATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAGAGATGGAAGATGCTCCTGTGGGGATTACTGGTAA

mRNA sequence

ATGGCTTCCTCGATTCCTTCTCAGGCCACTCGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCATCCCAATTCACTCTCCTGCTGTCAAATCCTTCCGGCCGACGTCCTTGTGCACTAATGCTCTCTCCAATTCCCGCAATCGGAAGGCGGCTCGCTCGTACGACGGCCAAAGCTCGACGAACACTCTCTCGAAATCTCAGAACCAGACGACCGATTCAGTTTTTGGACTTCCGTCTGCGGTGGATTTAGTGGCTCTATGCGAAGAGGGTAAGGTAATGGATGCTCTGGAATGTATTGGCCAAGGTGGTAATGTTGATTATGGTGTTTTTACTGCTTTGTTGAATTCTTGTGGGAATTTGAAGTTGCTTGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGTGGAATTGAACAATAAATTGATTGAAGTGTACTCGAGTTGTGGCTGTATGAAAGATGCACGTAGGGTGTTCGATAAAATGCCTGACAGGGATACATGGACTTGGAATTTAATGATCAAGGGGTATGGAGAGAATGGTGAAGGAGATCATGGGTTGGCTTTGTTTGAGCAAATGAAGAATGTGGGATTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCAGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTATATTTTACTTTAACTCAATGGAAAATGAATATGGAATCAATCCTGAAATTGGACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGACATTTGATTGAAGCAGAGGAGTTCATTGAGAACATGTCCATCAATCCCACAGCCAAAATCTGGGATGCCCTTAGAAACTACGCTCAACTCCATGGAAACATGGAGCTTGAAGATCGAGCCGAGGAGTTGATGTTCTCTCTGGACCCGTCCATGGCAGCCACAGCTGCCAACCCACCGCTCCCTCTGCCAAGAAAGCAATCAGCAACCAACATGTTGGAGGAGAAGGATAGAGTGAGGGAGTTTAGATGTGCAATGCCTTACAAAGAAGAGGGTGAAGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGCTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCTAAACAGCAGGCTTTGCAATACCATAGCGAGCGGTTGGCCATTGCTTATGGATTGATCAGTACACCAGCGAGAACGACGCTGAGGATCATCAAGAATCTTCGGATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAGAGATGGAAGATGCTCCTGTGGGGATTACTGGTAA

Coding sequence (CDS)

ATGGCTTCCTCGATTCCTTCTCAGGCCACTCGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCATCCCAATTCACTCTCCTGCTGTCAAATCCTTCCGGCCGACGTCCTTGTGCACTAATGCTCTCTCCAATTCCCGCAATCGGAAGGCGGCTCGCTCGTACGACGGCCAAAGCTCGACGAACACTCTCTCGAAATCTCAGAACCAGACGACCGATTCAGTTTTTGGACTTCCGTCTGCGGTGGATTTAGTGGCTCTATGCGAAGAGGGTAAGGTAATGGATGCTCTGGAATGTATTGGCCAAGGTGGTAATGTTGATTATGGTGTTTTTACTGCTTTGTTGAATTCTTGTGGGAATTTGAAGTTGCTTGAGGCTGGAAGAAGGGTGGATGGGCTGTTGAAGGGGACGAAGTTTCGTGGGGATGTGGAATTGAACAATAAATTGATTGAAGTGTACTCGAGTTGTGGCTGTATGAAAGATGCACGTAGGGTGTTCGATAAAATGCCTGACAGGGATACATGGACTTGGAATTTAATGATCAAGGGGTATGGAGAGAATGGTGAAGGAGATCATGGGTTGGCTTTGTTTGAGCAAATGAAGAATGTGGGATTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCAGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTATATTTTACTTTAACTCAATGGAAAATGAATATGGAATCAATCCTGAAATTGGACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGACATTTGATTGAAGCAGAGGAGTTCATTGAGAACATGTCCATCAATCCCACAGCCAAAATCTGGGATGCCCTTAGAAACTACGCTCAACTCCATGGAAACATGGAGCTTGAAGATCGAGCCGAGGAGTTGATGTTCTCTCTGGACCCGTCCATGGCAGCCACAGCTGCCAACCCACCGCTCCCTCTGCCAAGAAAGCAATCAGCAACCAACATGTTGGAGGAGAAGGATAGAGTGAGGGAGTTTAGATGTGCAATGCCTTACAAAGAAGAGGGTGAAGGGAAGCTAAAAGGATTGAATGGACAAATGAGAGAAGCAGGCTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCTAAACAGCAGGCTTTGCAATACCATAGCGAGCGGTTGGCCATTGCTTATGGATTGATCAGTACACCAGCGAGAACGACGCTGAGGATCATCAAGAATCTTCGGATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGAAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAGAGATGGAAGATGCTCCTGTGGGGATTACTGGTAA

Protein sequence

MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQSSTNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRAEELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW

Homology

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BLAST of Spg003366 vs. NCBI nr
Match: KAA0061500.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 808.9 bits (2088), Expect = 2.2e-230
Identity = 403/458 (87.99%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+SSI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALC+EGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GINPEI HYLGVVDVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. NCBI nr
Match: XP_038889181.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 807.4 bits (2084), Expect = 6.5e-230
Identity = 397/458 (86.68%), Postives = 420/458 (91.70%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+SSIP  A  NS+IT NFKSR +PIH P  KSFR T LCTNALSNSR RKA R YD QS
Sbjct: 1   MSSSIPPHAAGNSVITANFKSRSLPIHFPTAKSFRSTPLCTNALSNSRFRKAVRQYDDQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           + NTLSKSQNQT+DSV+ LPS VDL+ALCEEGKV+DALE IGQG NVDYGVFTALLNSC 
Sbjct: 61  TANTLSKSQNQTSDSVYSLPSTVDLMALCEEGKVIDALEYIGQGANVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRV+G+LKGT FRGDVELNNKLIEVYS+CGCMKDAR+VFDKMPDRDT TWNL
Sbjct: 121 NLKLLEAGRRVNGVLKGTNFRGDVELNNKLIEVYSTCGCMKDARKVFDKMPDRDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYG+NGEGD GLALFEQMKNVGLQPN ETFLVVLAACA+AEAVEEG+FYFN MENEY
Sbjct: 181 MIKGYGDNGEGDDGLALFEQMKNVGLQPNPETFLVVLAACAIAEAVEEGLFYFNIMENEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI+PEI HYLGVVDVLGK GHLIEAEEFIE M INPTAK+WDALRNYA+LHGNMELEDRA
Sbjct: 241 GISPEIEHYLGVVDVLGKFGHLIEAEEFIEKMPINPTAKLWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   PPLP  RK S+TNMLEEKDRVREFRCAMPYKE+GEGKLKGLNG
Sbjct: 301 EELMFSLDPSTMATTIKPPLPPRRKDSSTNMLEEKDRVREFRCAMPYKEKGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           Q+REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QIREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. NCBI nr
Match: XP_008459269.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo])

HSP 1 Score: 806.2 bits (2081), Expect = 1.4e-229
Identity = 400/458 (87.34%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+SSI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALCEEGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI+PEI HYLGV+DVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. NCBI nr
Match: TYK10773.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 803.9 bits (2075), Expect = 7.2e-229
Identity = 399/458 (87.12%), Postives = 423/458 (92.36%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+ SI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALCEEGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI+PEI HYLGV+DVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. NCBI nr
Match: XP_023538219.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 802.0 bits (2070), Expect = 2.7e-228
Identity = 400/459 (87.15%), Postives = 418/459 (91.07%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           MASSIPSQ   NSIITTNF SRIIP HSPAVKSFRP   C NALSNS NRK AR YDGQ+
Sbjct: 1   MASSIPSQTAPNSIITTNFTSRIIPFHSPAVKSFRPKLFCPNALSNSSNRKPARRYDGQT 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLSKSQN+T+DSV  LPS VDLVALCE G+VMD LE IGQG ++DYG+FTALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGAHLDYGIFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNNKLIE+YS CGCMKDARRVFDKMPDRD  TWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNKLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD GLALFE+MKNVGLQPNSETFL VLAACAMAEAVEEG+FYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKNVGLQPNSETFLAVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI PEI HYLGVVDVLGKSGHLIEAEEFI+ + INPTAKIWDALR YA+LHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGE-GKLKGLN 360
           EEL+FS DPSMA T A PPLP PRKQSATNMLEEKDRVREFRCAMPYKEEGE GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTVAKPPLPPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           DCHNAIKIMSKIVGRELIVRDNKRFHHF+D +CSCGDYW
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDSKCSCGDYW 459

[Close]

BLAST of Spg003366 vs. ExPASy Swiss-Prot
Match: Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-116
Identity = 208/393 (52.93%), Postives = 270/393 (68.70%), Query Frame = 0


Query: 66  SKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCGNLKLL 125
           ++S NQ  + V   PS  +++ LC+     DA+E + +G   D   F  L  SC NLK L
Sbjct: 194 NQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSL 253

Query: 126 EAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNLMIKGY 185
           E  ++V      +KFRGD +LNN +I ++  C  + DA+RVFD M D+D  +W+LM+  Y
Sbjct: 254 EHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAY 313

Query: 186 GENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEYGINPE 245
            +NG GD  L LFE+M   GL+PN ETFL V  ACA    +EE   +F+SM+NE+GI+P+
Sbjct: 314 SDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPK 373

Query: 246 IGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRAEELMF 305
             HYLGV+ VLGK GHL+EAE++I ++   PTA  W+A+RNYA+LHG+++LED  EELM 
Sbjct: 374 TEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMV 433

Query: 306 SLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNGQMREA 365
            +DPS  A     P P P+    TNM+  K R+ EFR    YK+E + ++    G +   
Sbjct: 434 DVDPS-KAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK-EMAAKKGVV--- 493

Query: 366 GYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAI 425
            YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN I
Sbjct: 494 -YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFI 553

Query: 426 KIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           KIMSKI+GR LIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 554 KIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Spg003366 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.2e-78
Identity = 152/369 (41.19%), Postives = 217/369 (58.81%), Query Frame = 0


Query: 113 TALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPD 172
           T +L++C  L  L  G+ V  L++ T F   + ++  LI +Y+ CG + +ARR+FD M  
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483

Query: 173 RDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFY 232
           ++  TWN MI GYG +G+G   L +F +M N G+ P   TFL VL AC+ A  V+EG   
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 233 FNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHG 292
           FNSM + YG  P + HY  +VD+LG++GHL  A +FIE MSI P + +W+ L    ++H 
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603

Query: 293 NMELEDRAEELMFSLDP----------SMAATAANPPLPLPRKQSAT----------NML 352
           +  L     E +F LDP          ++ +   N P     +Q+A            ++
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663

Query: 353 EEKDRVREFRC---AMPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQY 412
           E  +    F     + P  +E   KL+ L G+MREAGY P+T   LHD++EE ++  ++ 
Sbjct: 664 EIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKV 723

Query: 413 HSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 459
           HSERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHF+D
Sbjct: 724 HSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKD 783

[Close]

BLAST of Spg003366 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.0e-76
Identity = 146/370 (39.46%), Postives = 216/370 (58.38%), Query Frame = 0


Query: 112 FTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMP 171
           F++++ +C +L  L  G+++ G +    F  ++ + + L+++YS CG +K AR++FD+M 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 172 DRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIF 231
             D  +W  +I G+  +G G   ++LFE+MK  G++PN   F+ VL AC+    V+E   
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465

Query: 232 YFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLH 291
           YFNSM   YG+N E+ HY  V D+LG++G L EA  FI  M + PT  +W  L +   +H
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525

Query: 292 GNMELEDRAEELMFSLD--------------------PSMAATAANPPLPLPRKQSATNM 351
            N+EL ++  E +F++D                      MA           RK+ A + 
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585

Query: 352 LEEKDRVREFRC---AMPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQ 411
           +E K++   F     + P  ++    LK +  QM + GYV DT  VLHD+DEE K++ L 
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLF 645

Query: 412 YHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 459
            HSERLA+A+G+I+T   TT+R+ KN+RIC DCH AIK +SKI  RE+IVRDN RFHHF 
Sbjct: 646 GHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 705

[Close]

BLAST of Spg003366 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-74
Identity = 142/379 (37.47%), Postives = 223/379 (58.84%), Query Frame = 0


Query: 103 QGGNVDYGVFTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKD 162
           +GG ++   F++ L++C ++  LE G+++ G L    +     + N L+ +Y  CG +++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARRVFDKMPDRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAM 222
           A  +F +M  +D  +WN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVEEGIFYFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWD 282
              V++G  YF +M  +YG+ P   HY  +VD+LG++G L +A   ++NM   P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYAQLHGNMELEDRAEELMFSLDP---SMAATAANPPLPLPR--------------- 342
            L   +++HGN EL + A + +F+++P    M    +N      R               
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 --KQSATNMLEEKDRVREFRCA---MPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDID 402
             K    + +E +++   F       P K+E    L+ L+ +M++AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

[Close]

BLAST of Spg003366 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.7e-74
Identity = 151/374 (40.37%), Postives = 219/374 (58.56%), Query Frame = 0


Query: 108 DYGVFTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVF 167
           DY  F+++++ C N  LLE GR++ GL   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPDRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVE 227
           +++P ++   WN M+K Y ++      + LF++MK  G++PN  TFL VL AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGIFYFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNY 287
           EG +YF+ M+ E  I P   HY  +VD+LG++G L EA E I NM I+PT  +W AL   
Sbjct: 337 EGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 AQLHGNMELEDRAEELMFSLDPSMAA----------------TAANPPLPL----PRKQS 347
             +H N EL   A + +F L P  +                  AA     L     +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 ATNMLEEKDRVREFRCAMPYKEEGE---GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F       E+ +    KL  L  +M +AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 459
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

[Close]

BLAST of Spg003366 vs. ExPASy TrEMBL
Match: A0A5A7V2K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00600 PE=3 SV=1)

HSP 1 Score: 808.9 bits (2088), Expect = 1.1e-230
Identity = 403/458 (87.99%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+SSI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALC+EGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GINPEI HYLGVVDVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. ExPASy TrEMBL
Match: A0A1S3C9A6 (pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=3656 GN=LOC103498440 PE=3 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 7.0e-230
Identity = 400/458 (87.34%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+SSI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALCEEGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI+PEI HYLGV+DVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. ExPASy TrEMBL
Match: A0A5D3CFT5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00860 PE=3 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 3.5e-229
Identity = 399/458 (87.12%), Postives = 423/458 (92.36%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           M+ SI S AT NSI TTNFKS IIPIH PAVKSFR T L TNALSNSR RKAAR YD QS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLS+SQNQT+DSV+  PS VDL+ALCEEGKV+DALE IGQG  VDYGVFTALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIE+YS+CGCMK+AR+VFDKMP++DT TWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD+GLALFE+MKNVGLQPNSETFLV+LAACAMAEAVEEG+FYFN M NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI+PEI HYLGV+DVLGKSGHLIEAEEFIE M INPTAKIWDALRNYA+LHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNG 360
           EELMFSLDPS  AT   P LP  RKQS+TNMLEEKDRVREFR AMPYKEEGEGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Spg003366 vs. ExPASy TrEMBL
Match: A0A6J1FC52 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444273 PE=3 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 1.7e-228
Identity = 401/459 (87.36%), Postives = 420/459 (91.50%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           MASSIPSQ T NSIITTNF SRIIP HSPAVKSFRPT  C N+LSNS NRK AR YDGQ+
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLSKSQN+T+DSV  LPS VDLVALCE G+VMD LE IGQG N+DYG+ TALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNN LIE+YS CGCMKDARRVFDKMPDRD  TWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD GLALFE+MK+VGLQPNSETFLVVLAACAMAEAVEEG+FYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI PEI HYLGVVDVLGKSGHLIEAEEFI+ + INPTAKIWDALR YA+LHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGE-GKLKGLN 360
           EEL+FS DPSMA TAA PPL  PRKQSATNMLEEKDRVREFRCAMPYKEEGE GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           DCHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459

[Close]

BLAST of Spg003366 vs. ExPASy TrEMBL
Match: A0A6J1FHU4 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444273 PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 400/458 (87.34%), Postives = 419/458 (91.48%), Query Frame = 0


Query: 1   MASSIPSQATRNSIITTNFKSRIIPIHSPAVKSFRPTSLCTNALSNSRNRKAARSYDGQS 60
           MASSIPSQ T NSIITTNF SRIIP HSPAVKSFRPT  C N+LSNS NRK AR YDGQ+
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  STNTLSKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCG 120
           +TNTLSKSQN+T+DSV  LPS VDLVALCE G+VMD LE IGQG N+DYG+ TALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNL 180
           N KLLEAGRRVD LLKGTKF GDV LNN LIE+YS CGCMKDARRVFDKMPDRD  TWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEY 240
           MIKGYGENGEGD GLALFE+MK+VGLQPNSETFLVVLAACAMAEAVEEG+FYFNSMENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRA 300
           GI PEI HYLGVVDVLGKSGHLIEAEEFI+ + INPTAKIWDALR YA+LHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGE-GKLKGLN 360
           EEL+FS DPSMA TAA PPL  PRKQSATNMLEEKDRVREFRCAMPYKEEGE GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFRDGRCSCGDY 458
           DCHNAIKIMSKIVGRELIVRDNKRFHHF+DG+CSCGDY
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDY 458

[Close]

BLAST of Spg003366 vs. TAIR 10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-117
Identity = 208/393 (52.93%), Postives = 270/393 (68.70%), Query Frame = 0


Query: 66  SKSQNQTTDSVFGLPSAVDLVALCEEGKVMDALECIGQGGNVDYGVFTALLNSCGNLKLL 125
           ++S NQ  + V   PS  +++ LC+     DA+E + +G   D   F  L  SC NLK L
Sbjct: 194 NQSPNQMNE-VAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSL 253

Query: 126 EAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPDRDTWTWNLMIKGY 185
           E  ++V      +KFRGD +LNN +I ++  C  + DA+RVFD M D+D  +W+LM+  Y
Sbjct: 254 EHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAY 313

Query: 186 GENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFYFNSMENEYGINPE 245
            +NG GD  L LFE+M   GL+PN ETFL V  ACA    +EE   +F+SM+NE+GI+P+
Sbjct: 314 SDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPK 373

Query: 246 IGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHGNMELEDRAEELMF 305
             HYLGV+ VLGK GHL+EAE++I ++   PTA  W+A+RNYA+LHG+++LED  EELM 
Sbjct: 374 TEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMV 433

Query: 306 SLDPSMAATAANPPLPLPRKQSATNMLEEKDRVREFRCAMPYKEEGEGKLKGLNGQMREA 365
            +DPS  A     P P P+    TNM+  K R+ EFR    YK+E + ++    G +   
Sbjct: 434 DVDPS-KAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK-EMAAKKGVV--- 493

Query: 366 GYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAI 425
            YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN I
Sbjct: 494 -YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFI 553

Query: 426 KIMSKIVGRELIVRDNKRFHHFRDGRCSCGDYW 459
           KIMSKI+GR LIVRDNKRFHHF+DG+CSCGDYW
Sbjct: 554 KIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Spg003366 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 2.2e-79
Identity = 152/369 (41.19%), Postives = 217/369 (58.81%), Query Frame = 0


Query: 113 TALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMPD 172
           T +L++C  L  L  G+ V  L++ T F   + ++  LI +Y+ CG + +ARR+FD M  
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483

Query: 173 RDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIFY 232
           ++  TWN MI GYG +G+G   L +F +M N G+ P   TFL VL AC+ A  V+EG   
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 233 FNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLHG 292
           FNSM + YG  P + HY  +VD+LG++GHL  A +FIE MSI P + +W+ L    ++H 
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603

Query: 293 NMELEDRAEELMFSLDP----------SMAATAANPPLPLPRKQSAT----------NML 352
           +  L     E +F LDP          ++ +   N P     +Q+A            ++
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663

Query: 353 EEKDRVREFRC---AMPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQY 412
           E  +    F     + P  +E   KL+ L G+MREAGY P+T   LHD++EE ++  ++ 
Sbjct: 664 EIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKV 723

Query: 413 HSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFRD 459
           HSERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHF+D
Sbjct: 724 HSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKD 783

[Close]

BLAST of Spg003366 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 286.6 bits (732), Expect = 3.6e-77
Identity = 146/370 (39.46%), Postives = 216/370 (58.38%), Query Frame = 0


Query: 112 FTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVFDKMP 171
           F++++ +C +L  L  G+++ G +    F  ++ + + L+++YS CG +K AR++FD+M 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 172 DRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGIF 231
             D  +W  +I G+  +G G   ++LFE+MK  G++PN   F+ VL AC+    V+E   
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465

Query: 232 YFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNYAQLH 291
           YFNSM   YG+N E+ HY  V D+LG++G L EA  FI  M + PT  +W  L +   +H
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525

Query: 292 GNMELEDRAEELMFSLD--------------------PSMAATAANPPLPLPRKQSATNM 351
            N+EL ++  E +F++D                      MA           RK+ A + 
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585

Query: 352 LEEKDRVREFRC---AMPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQ 411
           +E K++   F     + P  ++    LK +  QM + GYV DT  VLHD+DEE K++ L 
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLF 645

Query: 412 YHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFR 459
            HSERLA+A+G+I+T   TT+R+ KN+RIC DCH AIK +SKI  RE+IVRDN RFHHF 
Sbjct: 646 GHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 705

[Close]

BLAST of Spg003366 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 280.8 bits (717), Expect = 2.0e-75
Identity = 142/379 (37.47%), Postives = 223/379 (58.84%), Query Frame = 0


Query: 103 QGGNVDYGVFTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKD 162
           +GG ++   F++ L++C ++  LE G+++ G L    +     + N L+ +Y  CG +++
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462

Query: 163 ARRVFDKMPDRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAM 222
           A  +F +M  +D  +WN MI GY  +G G+  L  FE MK  GL+P+  T + VL+AC+ 
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522

Query: 223 AEAVEEGIFYFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWD 282
              V++G  YF +M  +YG+ P   HY  +VD+LG++G L +A   ++NM   P A IW 
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582

Query: 283 ALRNYAQLHGNMELEDRAEELMFSLDP---SMAATAANPPLPLPR--------------- 342
            L   +++HGN EL + A + +F+++P    M    +N      R               
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642

Query: 343 --KQSATNMLEEKDRVREFRCA---MPYKEEGEGKLKGLNGQMREAGYVPDTRYVLHDID 402
             K    + +E +++   F       P K+E    L+ L+ +M++AGYV  T  VLHD++
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702

Query: 403 EEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
           EE K++ ++YHSERLA+AYG++   +   +R+IKNLR+C DCHNAIK M++I GR +I+R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762

[Close]

BLAST of Spg003366 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 280.0 bits (715), Expect = 3.4e-75
Identity = 151/374 (40.37%), Postives = 219/374 (58.56%), Query Frame = 0


Query: 108 DYGVFTALLNSCGNLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEVYSSCGCMKDARRVF 167
           DY  F+++++ C N  LLE GR++ GL   + F     + + L+ +YS CG  + A +VF
Sbjct: 217 DYS-FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 276

Query: 168 DKMPDRDTWTWNLMIKGYGENGEGDHGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVE 227
           +++P ++   WN M+K Y ++      + LF++MK  G++PN  TFL VL AC+ A  V+
Sbjct: 277 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 336

Query: 228 EGIFYFNSMENEYGINPEIGHYLGVVDVLGKSGHLIEAEEFIENMSINPTAKIWDALRNY 287
           EG +YF+ M+ E  I P   HY  +VD+LG++G L EA E I NM I+PT  +W AL   
Sbjct: 337 EGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 396

Query: 288 AQLHGNMELEDRAEELMFSLDPSMAA----------------TAANPPLPL----PRKQS 347
             +H N EL   A + +F L P  +                  AA     L     +K++
Sbjct: 397 CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKET 456

Query: 348 ATNMLEEKDRVREFRCAMPYKEEGE---GKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQ 407
             + +EE+++V  F       E+ +    KL  L  +M +AGY+ DT YVL ++D + K 
Sbjct: 457 GLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKN 516

Query: 408 QALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF 459
           Q ++YHSERLAIA+GLI+ PA   +R++KNLR+CGDCHNAIK MS    R +IVRDN RF
Sbjct: 517 QTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRF 576

The following BLAST results are available for this feature:

BLAST of Spg003366 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061500.1	2.2e-230	87.99	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038889181.1	6.5e-230	86.68	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benin...	[more]
XP_008459269.1	1.4e-229	87.34	PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis m...	[more]
TYK10773.1	7.2e-229	87.12	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_023538219.1	2.7e-228	87.15	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur...	[more]

BLAST of Spg003366 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE5	3.8e-116	52.93	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop...	[more]
Q9SUH6	3.2e-78	41.19	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	5.0e-76	39.46	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9SY02	2.8e-74	37.47	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9LTF4	4.7e-74	40.37	Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th...	[more]

BLAST of Spg003366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2K9	1.1e-230	87.99	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C9A6	7.0e-230	87.34	pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=36...	[more]
A0A5D3CFT5	3.5e-229	87.12	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1FC52	1.7e-228	87.36	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]
A0A6J1FHU4	2.5e-227	87.34	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of Spg003366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15690.1	2.7e-117	52.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	2.2e-79	41.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	3.6e-77	39.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	2.0e-75	37.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G52630.1	3.4e-75	40.37	mitochondrial RNAediting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 82..340 e-value: 2.0E-29 score: 105.0
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 346..448 e-value: 2.8E-33 score: 114.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 174..221 e-value: 1.1E-10 score: 41.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 148..173 e-value: 0.0078 score: 16.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..209 e-value: 5.3E-8 score: 30.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.528824
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..72
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 4..453
None	No IPR available	PANTHER	PTHR24015:SF1685	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 4..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003366.1	Spg003366.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding