Spg003353 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003353
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Profilin
Location	scaffold4: 48671109 .. 48673213 (-)
RNA-Seq Expression	Spg003353
Synteny	Spg003353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAAACGTATGTTGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATCGGCCACGATGGCAGCGTCTGGGCTCAGAGCTCCTCATTTCCTCAGGTTCCGATCATCCTCCTTCTCGCTGTTTCTTATTGATTTCAAAATTGTACTCGTCTTCGGCTTGTGGATTGGATGGTTTTATGGTTTTAGCATCGGTGCATTTTAGGGCGTTAATTTATTGTTTCGGATGTGGAGTTGCGATCTTTGATCGGTTATTTGTAAATGCTGATATGGTCTTCGTGTTCGTTTAGTCGGTATTGGTTCTCAATTGATTGATTTTTTTGTATTTCGAAATCGAGATCATGATCTGATTGTTGCATGATAGAGCCTTAGAACGAACTTAAGGTATTCATAGCCTTGTTCTCTCTCTGTGGTGATGGAAATTGTGTCATTGATAGGGTGGATAAATGATAATGTTAATTTCTCTTGTTTTTGAATCATTTACATGGTGATGATGATTAATCAATGGTTCTCGTCAATGTGTCGTAATTTAATTCATTAGATGCCGATGGCGAGGATTCTGATTGATTCCTCGTTTTTTAATCATTTACGTGATGGATTAATGGTTCTGGTCAATGTGTATCATGATTCTGGTTGATTACGTTATCGTGTGATCTTAATATTGCAGTTCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAGCCGGGTCATCTTGCACCTACTGGACTACACCTTGGAGGTACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGTGATGTAAAACATCATGAAATCTGCACGTTTTTGGATTATTGATTCCTTTCTCGTCTCATTTTGTTCATAAGGTTCAGATATTGTCATTTTTTTCTTCCATGGTTAGTTATGTTGAAACGCTTTCCACTGTGATCACTGGTACAAAATAGAGAAACTAGTAATATTTACATTACATGAAGTATGAACCAGTAACATAATTAGATTTTGTGTTAACATGTTCTTGATTTGTGAATTCCAACAGGGGATCCATTATGTAATAACAATTGTTGACACCTCGACAATTTTGAAAGGCTCAAAAGTGACAGCTAGAACTTCATTCATTTGCTTTTGATCGTTTTCTAAAGAAATGAAATTTAATCTTGCAAATTCATAGCTGCTTCATGGTTGCATTTGAATTTGGGTTGTTACATTGCGAAATCACACCTCTGACTAAAATTTATATGGCTGGTATGATATCATTCTGGGCTTATACATGTATTGTGATTCATTTGAGAGTAATTGGTATTATGATTCATTTGATAGTTATTATTCAATATCGTGGCTCAAAGTGAGCATAACTCAGTGGTATTTGACTTGTATTCTCAAATCGTGGTTGCTACTCTCTCAACTCTCATGAGAGTTGCCAGTCTGAGCACAACTCATTGGATAAGATATTAATTACCATCCCAAAGATGGATGGTTCGATCTTGTGCTAAATAGGGTGAAAAATATATATACTTGTTCTCATTTGATGACCTTGCTTACATCATGCTATGAACTAAAGTCTGTTCTATTTCTCTTCTATTGGATTCTCGTGGCAGGGTTCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGCATCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGCGACTACCTCGTCGATCAGGGTCTGTAGGCTTTTTAAGTCCATCTCAGTTCCCAGTATCGAATTTTGGCCTACAATTATTCTTTTTTCAGATTTTCTTTTTCTTCTTTTCCATTTTTTCATTCTTTCTTTTTGTGTTTGTTTGGTTCCAAGTTTGCATATGCTTCATTCTAGCCCCTCAGAATTGGCAGAGAAGTTAATGCAGACAATAACCTTCTGAAAGATATTAACAGTTGTTTGGTGTTTGGCTTTTGATTAATTTTCATAAAATATCTGAATGTTTTTGGATATTTACTCTGCTTTTCCCTCCCATTTCTCCCATTTTGCTATATGGTGTCTATGCCTCTTGATTTGACAGGTGAG

mRNA sequence

ATGTCGTGGCAAACGTATGTTGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATCGGCCACGATGGCAGCGTCTGGGCTCAGAGCTCCTCATTTCCTCAGGTTCCGATCATCCTCCTTCTCGCTTTCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAGCCGGGTCATCTTGCACCTACTGGACTACACCTTGGAGGTACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGTTCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGCATCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGCGACTACCTCGTCGATCAGGGTCTGTAG

Coding sequence (CDS)

ATGTCGTGGCAAACGTATGTTGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATCGGCCACGATGGCAGCGTCTGGGCTCAGAGCTCCTCATTTCCTCAGGTTCCGATCATCCTCCTTCTCGCTTTCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAGCCGGGTCATCTTGCACCTACTGGACTACACCTTGGAGGTACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGTTCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGCATCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGCGACTACCTCGTCGATCAGGGTCTGTAG

Protein sequence

MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

Homology

[Close]

BLAST of Spg003353 vs. NCBI nr
Match: XP_022154694.1 (profilin-4 [Momordica charantia])

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 130/141 (92.20%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTA+AI+GHDGSVWAQSSSFPQ        FKP+EITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQ--------FKPQEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. NCBI nr
Match: XP_038890820.1 (profilin-4 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAI+GHDGSVWAQS+SFPQ        FK EEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSASFPQ--------FKSEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGIT+KKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. NCBI nr
Match: XP_038695731.1 (profilin-4 [Tripterygium wilfordii] >XP_038712272.1 profilin-4 [Tripterygium wilfordii] >KAF5726028.1 profilin-4 [Tripterygium wilfordii] >KAF5743017.1 profilin-4 [Tripterygium wilfordii])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 128/141 (90.78%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAI+GHDGSVWAQSS+FPQ+        KPEEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSSTFPQI--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGG+TIKKT QALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTSQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. NCBI nr
Match: XP_008458981.1 (PREDICTED: profilin-4 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 6.7e-69
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAI+GHDGSVWAQS+SFPQ        FK EEI GI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSASFPQ--------FKSEEINGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. NCBI nr
Match: XP_023547012.1 (profilin-4 [Cucurbita pepo subsp. pepo] >XP_023547256.1 profilin-4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 8.8e-69
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS+SFPQ        +KPEEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQ--------YKPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPG+LAPTGLHL GTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy Swiss-Prot
Match: A4KA45 (Profilin-4 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-69
Identity = 125/141 (88.65%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQSSSFPQ+        KPEEITGI
Sbjct: 1   MSWQTYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQL--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYL+DQGL
Sbjct: 121 TPGQCNMVVERLGDYLIDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy Swiss-Prot
Match: A4K9Z8 (Profilin-2 OS=Betula pendula OX=3505 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.1e-69
Identity = 123/141 (87.23%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQSSSFPQ        FKP+EITGI
Sbjct: 1   MSWQTYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQ--------FKPQEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDF+EPGHLAPTGLHLGG KYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYL+DQGL
Sbjct: 121 TPGQCNMVVERLGDYLIDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy Swiss-Prot
Match: A4KA44 (Profilin-3 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.1e-69
Identity = 124/141 (87.94%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQSSSFPQ+        KPEEITGI
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQL--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLV+QGL
Sbjct: 121 TPGQCNMVVERLGDYLVEQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy Swiss-Prot
Match: A4KA39 (Profilin-1 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.0e-68
Identity = 123/141 (87.23%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQSSSFPQ+        KPEEITGI
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQL--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYL++QGL
Sbjct: 121 TPGQCNMVVERLGDYLLEQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy Swiss-Prot
Match: A4KA40 (Profilin-2 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 2.7e-68
Identity = 123/141 (87.23%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQSSSFPQ+        KPEEITGI
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQL--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYL +QGL
Sbjct: 121 TPGQCNMVVERLGDYLAEQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy TrEMBL
Match: A0A6J1DMX1 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021890 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 130/141 (92.20%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTA+AI+GHDGSVWAQSSSFPQ        FKP+EITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQ--------FKPQEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy TrEMBL
Match: A0A7J7BW29 (Profilin OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G01079 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 128/141 (90.78%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAI+GHDGSVWAQSS+FPQ+        KPEEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSSTFPQI--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGG+TIKKT QALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTSQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy TrEMBL
Match: A0A1S3C988 (Profilin OS=Cucumis melo OX=3656 GN=LOC103498227 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.3e-69
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAI+GHDGSVWAQS+SFPQ        FK EEI GI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSASFPQ--------FKSEEINGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy TrEMBL
Match: A0A6J1KB52 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493871 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS+SFPQ         KPEEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQC--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPG+LAPTGLHL GTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. ExPASy TrEMBL
Match: A0A6J1G2J8 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450246 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS+SFPQ         KPEEITGI
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQC--------KPEEITGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
           MKDFDEPG+LAPTGLHL GTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV
Sbjct: 61  MKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVERLGDYLVDQGL
Sbjct: 121 TPGQCNMVVERLGDYLVDQGL 133

[Close]

BLAST of Spg003353 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-65
Identity = 114/142 (80.28%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI-DGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITG 60
           MSWQ YVD+HLMCD+ DGQG HLTAAAIIGHDGSVWAQS++FPQ        FKP+EIT 
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQ--------FKPQEITD 60

Query: 61  IMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEP 120
           IMKDFDEPGHLAPTG+ L G KYMVIQGEP AVIRGKKG+GGITIKKTGQ++VFG+YEEP
Sbjct: 61  IMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEP 120

Query: 121 VTPGQCNMVVERLGDYLVDQGL 142
           VTPGQCNMVVERLGDYL++QGL
Sbjct: 121 VTPGQCNMVVERLGDYLIEQGL 134

[Close]

BLAST of Spg003353 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 240.4 bits (612), Expect = 9.1e-64
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI-DGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITG 60
           MSWQTYVD+HLMCD+ DGQG HLTAAAI+GHDGSVWAQS++FPQ        FK +E + 
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQ--------FKGQEFSD 60

Query: 61  IMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEP 120
           IMKDFDEPGHLAPTGL + G KYMVIQGEPGAVIRGKKG+GGITIKKTGQ+ VFGIYEEP
Sbjct: 61  IMKDFDEPGHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEP 120

Query: 121 VTPGQCNMVVERLGDYLVDQGL 142
           VTPGQCNMVVERLGDYL++QGL
Sbjct: 121 VTPGQCNMVVERLGDYLLEQGL 134

[Close]

BLAST of Spg003353 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 214.5 bits (545), Expect = 5.3e-56
Identity = 102/141 (72.34%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQ+YVDDHLMCD+  +G HLTAAAI+G DGSVWAQS+ FPQ+        KP+EI GI
Sbjct: 1   MSWQSYVDDHLMCDV--EGNHLTAAAILGQDGSVWAQSAKFPQL--------KPQEIDGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
            KDF+EPG LAPTGL LGG KYMVIQGE GAVIRGKKG GG+TIKKT QALVFG Y+EP+
Sbjct: 61  KKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPM 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           T GQCN+VVERLGDYL++  L
Sbjct: 121 TGGQCNLVVERLGDYLIESEL 131

[Close]

BLAST of Spg003353 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 214.2 bits (544), Expect = 7.0e-56
Identity = 102/141 (72.34%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQ+YVDDHLMC++  +G HLT AAI G DGSVWAQSS+FPQ+        KP EI GI
Sbjct: 1   MSWQSYVDDHLMCEV--EGNHLTHAAIFGQDGSVWAQSSAFPQL--------KPAEIAGI 60

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
            KDF+E GHLAPTGL LGG KYMV+QGE GAVIRGKKG GG+TIKKT QALVFGIY+EP+
Sbjct: 61  NKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPM 120

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           T GQCN+VVERLGDYL++ GL
Sbjct: 121 TGGQCNLVVERLGDYLIESGL 131

[Close]

BLAST of Spg003353 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-55
Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQVPIILLLAFKPEEITGI 60
           MSWQTYVDDHLMCD+   G  LTAAAI+G DGSVWAQS++FPQV        KPEEI GI
Sbjct: 38  MSWQTYVDDHLMCDV--AGNRLTAAAILGQDGSVWAQSNNFPQV--------KPEEIQGI 97

Query: 61  MKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPV 120
             DF  PG LAPTGL LGG KYMVIQGEP AVIRGKKG+GG+TIKKT  ALVFGIY+EP+
Sbjct: 98  KDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPM 157

Query: 121 TPGQCNMVVERLGDYLVDQGL 142
           TPGQCNMVVE LG+YL++ GL
Sbjct: 158 TPGQCNMVVENLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of Spg003353 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154694.1	4.7e-70	92.20	profilin-4 [Momordica charantia]	[more]
XP_038890820.1	2.3e-69	91.49	profilin-4 [Benincasa hispida]	[more]
XP_038695731.1	3.0e-69	90.78	profilin-4 [Tripterygium wilfordii] >XP_038712272.1 profilin-4 [Tripterygium wil...	[more]
XP_008458981.1	6.7e-69	91.49	PREDICTED: profilin-4 [Cucumis melo]	[more]
XP_023547012.1	8.8e-69	91.49	profilin-4 [Cucurbita pepo subsp. pepo] >XP_023547256.1 profilin-4 [Cucurbita pe...	[more]

BLAST of Spg003353 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4KA45	1.1e-69	88.65	Profilin-4 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4K9Z8	9.1e-69	87.23	Profilin-2 OS=Betula pendula OX=3505 PE=1 SV=1	[more]
A4KA44	9.1e-69	87.94	Profilin-3 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4KA39	2.0e-68	87.23	Profilin-1 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4KA40	2.7e-68	87.23	Profilin-2 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]

BLAST of Spg003353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMX1	2.3e-70	92.20	Profilin OS=Momordica charantia OX=3673 GN=LOC111021890 PE=3 SV=1	[more]
A0A7J7BW29	1.5e-69	90.78	Profilin OS=Tripterygium wilfordii OX=458696 GN=HS088_TW09G01079 PE=3 SV=1	[more]
A0A1S3C988	3.3e-69	91.49	Profilin OS=Cucumis melo OX=3656 GN=LOC103498227 PE=3 SV=1	[more]
A0A6J1KB52	1.2e-68	91.49	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493871 PE=3 SV=1	[more]
A0A6J1G2J8	1.2e-68	91.49	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450246 PE=3 SV=1	[more]

BLAST of Spg003353 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19770.1	8.2e-65	80.28	profilin 5	[more]
AT4G29340.1	9.1e-64	79.58	profilin 4	[more]
AT2G19760.1	5.3e-56	72.34	profilin 1	[more]
AT4G29350.1	7.0e-56	72.34	profilin 2	[more]
AT5G56600.1	2.0e-55	73.05	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 50..70 score: 58.33 coord: 110..123 score: 66.43 coord: 123..140 score: 73.06 coord: 74..88 score: 72.5 coord: 3..12 score: 76.25
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 114..127 score: 87.01 coord: 1..14 score: 88.18 coord: 127..140 score: 83.64 coord: 94..109 score: 87.05
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..141 e-value: 2.4E-59 score: 213.2
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..140 e-value: 3.5E-42 score: 143.6
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..141
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..140 e-value: 2.10507E-56 score: 170.199
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..141 e-value: 5.6E-58 score: 196.7
None	No IPR available	PANTHER	PTHR11604:SF37	PROFILIN	coord: 1..141
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003353.1	Spg003353.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding