Sgr029842 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr029842
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	RNA-binding KH domain-containing protein
Location	tig00153533: 1885647 .. 1896315 (+)
RNA-Seq Expression	Sgr029842
Synteny	Sgr029842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAACAAAACTGCAGAGAATGGCTCCACTGATGCAGCCGTCCTCAATTCTAACCCCCAAAGTTCGACGCTTGCCTCTGTAGCTGCTGCAGAGCTAGACTCCACGGAAGCCGGCGGCGGTGAATCCGACCTGGATCCCTCAAACCCAGAGTATTTATCGGCTCCCGCTGCGGATTCTGCAGCTCAGGAAGGCTTGAATCAAGCTGGCGCCTCCGAGAAAAAGTGGCCCGGATGGCCCGGGGACTGCGTATTCCGGCTTATAGTACCGGTTGTTAAGGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGACGTGTGAGGAAACGAGGGCCAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGAGTGTTTTTTCTAACCCGAGCTTTGATACTCATGGTTACATAGAGACGAGACGTTGAATCTCAATCTTTATATCGGTTTATTTGTTATGTTAGGTTCAGTAACATGGTTTTGTCAAGGGCATGTGGTGCTAGTTATTGCTCCAGCCTGACCATGTTTACGTGTTTTTCGGTGGATAATTAGACTGGATGTAACGATTCCTAGTCAAGAGATATCTCCATTTTCGTGCCCTGAAGTTCCCAGAAAAAAAAAAAAACATTCTCCCATCTTTGGCTGGTTCCCTCAAATTTATATGTTATATGCTAGTCCCAACAAGTTATTTTCTACTTCTATCATAAAAGCCGCAGTTTATTTAAATTTTTTTTTTATTGTCTTCCGTTCTACAAGAGTTTTACTTTTATGGGACAACTATGACCTTACAACATTTGGTTATCAAAAAACATATAGGATTTTAATATCTTAAGTAGGTGTCTACCATGAGATTTGAACCCATTTCTCAAAGTCCTTTTGTTTTTTTTCACATGCCCCAATGCCACTTGGTGAACCCATGATATTAGGTTAGCTAATAATAGGAATGGAACTTCTTGGAAAAAGAAAGGAACTTTATGTGTTCTGGTTGTTTAAAATTGAAGCTTGATTTGAGATAAAACAACTAATTGCATTTGCTTTGCTGCTTCCATTTTAGCTATTTTATTTCCCAAATTCTCTTTTTGTTCCCAATAACTTCCTTTCTTTCCCATTTCTGTTGAAATGTTGAGTGAAGTGTTTAAAAGATATTAACAGAATTTATTGATTGGGCATGGCATATTCTGATATCTCGTGTTTGGACTTTGGTGGCTTGAGGATTTTTTTGATATTCCTCTTTTCTCTGTTCATATTTGTGGAGCGTATTTTTGGTTTGGGCATTTTGACTGGTCTTTGTTTGGTTCTTCCTTTTTTTGTAGCTTGTCTCAGGTGTTTCCTTGAAACCTCATTGTTGTTTTGTTTTGCTGTGTATTTTTGGGCTGTTTCCATTGTACTTTCATTTGTGAAGATGAAAGTTTTATTTTTTTTTCTCTATAAAAGAAATGAAGTATTGTTGGTGGGGCATGAATTTCACTAAATTTTGGCTTGTTCAGTAGGTATGACTTAAATGCAAACCAAAGTTTGCATAAAATAACAGGGAGAAGAATATTGCGAGCTGTTAAGCAGCTTGTTGTATAGAACAGTTTTAAGAATGGTGATTGGGTGACTTGTAATCTTTTGGTTATTGTGCAACTATTTATAGATTCTTGTTTCTCAAAAGAAAAGGAATTTAAAATTATAATTGATGGTTTTTTGCGAACAGTTCACTTAGAAAGTACTAAGGACCTCCTATTTGTATCAAAATAGTGTTCTTTAATTTTAAAAAGAAAAAACTTTTTTTAAACACTGCTGTCAAACAACCCTTTATTATCTCTTTCTGTGTATTGCACTAGAAAGAATACAAATAAGGAAGAATAAAAAATCCATCCCAATAGAAGGTCAGCGAAAAAGAAAATCTTTAATTGGTTAATCTCAATGAGTTAATCCTTAAGAATAGCTATGAGCAAGAAACTAAAGAGAGCGGGCCTACAAGAAATATGAAACAACTCTTCAAATGTCATGTTCCTCTTTAGCATCTTCCTAAAAAGATCCCTATGTTTCTTCCTTTTTAGATTTCTGATAAGTTGGCAATGACCAATTGATGACAAAGTTTTAACTTTTGGATAGAATATTGTGCCAAGAGTACAGTGAAGCAACATGATAAGTTACTTGGGGGTTGTTTCGGTGTATCTTTTAAAAAATGTTTTTAAAGACTATTTTGTAAAGGGTAGTGATGTGGTGTGAAGCAAGGTTGTGAGTGTGTAAAGCTAGTTATAATGGTGTACTATTAGCGATGGTTTAAAAGGCTAAAGGCGGCCTTACAACTTTACTTCTTGAAGAGGTGAGATGTAAGCCTTGAGGCAATATGAGACATAAACCTCAATTTAAATAAAAATCATAAAATTGTAAATTAAGTATTACTAAACATAATACTTAAATAAAAGCATAAAAAAAACCTCTTCGTTATCCATTGTCACTATTTTAAATAAATAGAGGTTACTTATTCTTTAATTTTTGTTATCAACATTCTTTCTGACTTCGCAGGAAAATTAGTAATGAGTTAAATTACTAGTTCATGGTATAATGGCTTGAAATGCATAAGTAAACTCTTATATATATTTTTTCAATTTAATTCTCTAGTTTCCTATACAAAAAAAAAAAGAAGAAAAACTCTTATATATTTTAAGAATATGACAAATTCATATTATTCTTCTATTGCAAGCTTGCACTTTCATGGAGCGTACCTTATATCCAAGAAGCAGAACTGAGCAAATATGACAGTGATCTGGCATGACTTCCTAATATGTTTTGTATAGCGGTTTTACTTACAAAAAAAAAAAAAAAACTCTTGTATTTTTTAAGAATATGTCAAATTGATATTATTCTTCTATTGCAAGCCTTGGCGCGTTCTCATGGGAGCGTAAGCCTCTTATAATCCAAAGAAGGCATAAGACTTGAGGCAAAATATGACGGTGATCTGGCCATGGACTTCCATAAATCATGTGTTTTTGTATAGGCGGGTTTTTACTTCCATTTTTTTATACTGATCTTGCAACCTGATTGGCTTTCAATTTTAGAAGGTGGTAATATGTACTTGGTATATTTAGAATTTGTACTTTGTTGTTTGAGGAGTGCTCATATGATTGTGATTAGGTTCAATGAAGAACTGAAATATATGGAAGAGAGGTATAAATTTTCCCTTTAGGAGGCTGTTGCAATTACCCTTTAATTCTTTGATGCTTCACTTTGATTTGCAAGAACACTTGGATGCATGTTTGTACAGTTTCTTTTAAGTAAGAGATCTTGTTGAAATTTTTTATTCAGTTTTTAATGTTTAAAGTTTACTTCAGGTGCTAATTTCAGGAAAAGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAGCGTGTGTCTGGATTTTCTGAGAATGAAGATGATGCTAAAGCTTCATTTTGTTCAATCCGGTTACTGGTGGCATCAACTCAAGCAATTAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGCACAGGAGCTTCTGTGCGAGTATTATCAGGAGGTATGCTTTCATTCTCTGTAATGCACGTACAGGGCTCTTTTACTGATTGGTTTTGGGCCTAGCTGTATTATTTTTCGAGGTCATGAAATCTACTAGATAGCTAAATTGTAGAGCCAGCAGATAGGCTATGATTGAGAGAAAGAGGAGTAAACACCCCCTCCAATTCTCATTGCAAGGGAGGGATCATTCTAAAGAATAATAATGCCCCAAAAGAACCAAGGGAATCAATGGAAGACCATCATCATTGTGAGAAGTGCAAATGGATCTGATAAAGATTGGTCCACCTTACTAAGCTTTGGTTTGTGCAGAAGAACAATATCCTGAGCATGATTAACTAAAGTGTTTTTTATAAGATATATCATAACCCCTGTTCCTAAACCCCTTTTAATTCAGTCCACTTGAGCACCTGCATTGGAAGAAAGATCATCTTGAGAACAAATATCATTACCAACTCTTTCATAATTAATGGAAGAGTGAAGATATCAAAGTTCTCCAAGCCCGAATCCTTCCTTTTCACAATTAATTTTTTAAATTCAATTTTCCCTTTGAAATTGGAGCAATGCATAGTTGTTATCTCTAAGCCACTTTTCCAATTGGGTATTTATCAACTATTCAACCATAGAGGTGATTTGGGTTAGGAAGTATATCTATGATCTAAATGTTCGTAAGAAGTGGAAATTTGGGATGCTTTATTGCAAGATTGCAACCTCACTAGTTCTTGCTCTTTTGCTCCCAAATTCTGGTCCTTTATCCATGAGGCTTTCAGCTGGCACACTGCTCGTCCAACCAACATGGTAGACCTGCTTGCATTTACTTTTGTGGGCCATCCTTTTAAAGGAGAGAGATTTTATGGATCAATTTCAATAGGGATTTCTTTTGGAAGCTATGGTTAGAAAGAAACAACCGCATCTTCAATGAAGCCAGGGAGCCTTTTGATAATTTTTTGAACTCTGTTCTTTTTTTTGGCTTTATGTTGGTGTAAAGGCTCTCCTCCTTTTTCTGATTATAGTCTTAGCATTCAATTGGAAGGTTTTGTTTTAATCCTTTGGCTTAGAGGTTCCCCCTTCCCCTTTTGTAATTTCATTTATCAATGAAATTCCTGTTTATTTTCAAAAAAAGAAAAAAATGCAACCTCACAAGTTGCGTAGTGTTTAGAGTTTGAGTTTGGTAGTTTATAGAGACAGAATACTGAAAGAGCTGTGTTAGGCCCCCTTCCATGCAAATATTTAGAGTCTCTAACTCTAGACAAATTAGAAGTTTCATCTTCAGAATATGAACTCTCCACGAACTAGACACTATGTTGTTGGAGAAAATATCCAAGAGAATCACTAGAGTCAATGGGGATCACATTTTTACCTTTGCCCATGGAGTTAAAGCACCTTCCATTTGAAAAAAAAAACCACTTTTTTAAAAGAAACCTGCATCTTATTGTTGACTGGCCTAGCTTCCTTAATACGAAGAGCACCTGGTTTTGGAGAAAGGCCCTTGGGTTGGTCAAAATTCCCTTTGTCCATTAGCCCATTCCATTGAAAAGCCTTCCAGAAAAGGCATCTCTCTTACCATTTTGACATGTTTGTTGTGAAGAGTTAAAATTGGTAATCGAAGGAAAGGAAAATTTTCCATTATCTATCATAAGGGTCTTATTGATATCCTTTGGAGTATTATCATATGCTTCCTTGTTGAAACCATACAACAAATCAAAATCAATTGGGTAGAAACCACCGGGTAAAAGGGAAAATTTGTCAAAGCCTATTGTCGACTCATTAGTGAAAGGACAATGTACTTTTGGGTTTCTACTAATTAGTCATCATGCATTAGAGTTGGCCACTACCTCAATCACTGTGGTTGCTGAAATCAAGTGGCAACTCCACCTCAACTAGTATGAAATCACAATAGGTTCAGTTAACTTGATCACAACCTCTATTAAACAGAGTTTTCTCATTGTTTATTGAGCACATATTGGGAATCTACCACAAGAATCACAAATAAGCTTGAAAAAATTTGAATTCCATACATCCAAAGGAATGTTTCTCACTTCTATCCCTCCTAGGAAGGAATGTAAGAAATATTTCCATGAAGACTAGTGTTCCATCCTCCAAATTTAAGGTAGAAATCCTTGATTGTAAGTGTAAGCTTGATCTTCGTTTGTGCAACCCTCAAAAGAGCCTTATCAAGGTGTAATGGGTTGATGGAACATAGTGGATGAATGAGTTTGCGTAGAATACGCCTTGTATCATTCATAGTGAAATCATATTCTATGCGCAACCACAAGTAATCTCTCAGTTAAGAGTCTTTTCCTTTTTTATTCACTATCGCAATGCTTGAATTTATCTTAACCAAGTTTTAGTAGAATTTTTTGGAAATAGCTGAAAGGGGCAGTTTTAGGTGGGGTTGTTCAATTGTTGGAGCAGGAAACAAAACTGCCTAGCCTGCACTTGTTCCTCCATGCCCATCGCCTGCCTAGCATCATGGTCGCTCACATACCTTTCGCTAGCTGCATGCAACTTGTCTCATTGCTCATTGCACATGGCCACGGTCACCCCTTAGACTGCTAACCCCTTTGGCATGATTCAACCTGCACACGCTTGGTCATCTACAAGCCTTGTTCATCACACATGAACTTGGTATAGGTGGCATATGCAGCTAGTGCCATGCTAACTTAGCATGTTACTGTCCACATCACACATGGTCTGCTCACCTTGTTGACATCCCCATGAGGCATCTAATCCAGCCTTAGCTAGTGATAAAATGGTGTGCGCTGAGGCACGTTCTGCATGCATACTGCATACGTGAATTTATATTTTTATTTTAAAAAGAAAATAGGCCATTTCTTATTTTTTTAGAAAGAAAATATAAACCCTCATTTCTTCTACCAATCTCTTACAAAAGTGCTCGTTTTCTTAAAATTTTCATTACCTCATCATTCATAATACTATACTTCTCATATATAAAAAGTTATTTATATTTTTCTATTATGTGCTTCACAAAAAAAGTTCTCCCTTGCCGCCAAAGGGCTATTACACTTTAGTGCATCTCGCATTTTGAAAACACTCGCCTAGGCACAATATGAGCCTTCAAGCTGCCATTGGGTGTTCACCTCAATGGTCTGACAGCAAGGATATACAATCTAAGAAACTGAAAACGAAACTTAAAAATGCAATCATCCTCTATCAATCATCCTTAAGTTTACTACCATCTCCAATTTTGAGGGCATAGGGCAGGGTGATGGATACTTGCTTTTAACCACCTATGAAGACATTCAGCTCCCTTTATATTTCCACAGCAAATTTACATTAATCCATCTTGATACTTCCTACGAGGTTCCCAACTCCATGATCTTCCTATTGACTAGGTGCTCAGAGCAGGGCATGGACACGGACACAGACACGGGACATGGATACGACACGATATGGACACAGTGATGCATCAATTTCTAGAAAAGTAGTTCAAGGACACGTTGGGATACGTCTTTTTTTTGTAAAACAAATTATGTGTATATATTGATATATTTAATACTTCAAAATAGATAAAACGTGTAAATTTAATATTAAAAAAACTGAAATGTGCTTGTAGTAGAGAAATGATGATGAGCTCCCCTCACAATTTCTTTTAGTTTTTCATATGGGTTTTTAGAGCCAGGTTAAATTGGGATTTTAGGGTTGTTTATAATAAGATAAGCAATGAGCTTTATGGGTTGGTAGTGAGCATAGTAATGGGCTGGGATAAATAAATATTAAAAAAATCATTTTTTTAAGGTCAATGTATTCACGTGACCCTCTTGTGTCAGAAATTGAAAAAAAAAAATTTTAAAATAGGATACTTATTTTTGGATGTGGACACGTGTCCGAAGTGTGTCCAGACGTATCTGTGTCCAACATGAACATTCGTAAAAAACAAGAGTGTCCATCCTTCCTAGGTACTCCCTCTCCCAAAGAAAATTGGGGTTTTTTTTAAAAAGAAACAAGAATTTCATTGAAAAATGAAATTGCAAAAGAGGGGTGGATACCCCAGCCAAAGGATTACAAAAATGCCTTCCAATTGGCTAAAAGAATGCTAAAATAAGTGATTGGGGTCTTATTTCTTTTGGTCTTATTTCTTTTGGGCATTTCTTTTTGAGCATTATCAGGTCATCTGAGAGAAGCATACTCATTCTGATGCACTGACATCTTTCTCTTGCTGACACCTGATAAAAAGCGACCTAAAACTAAACGTATCTGACAATAGCTAGAGAAAATAAGTCTTATTTTCTGCCTCAATTATATTGTTGTAAATTAAACTAACCGAGCATGGTGACTATTAACTTCAAACCTTTCTAGCTTCAGTCACCCAGTGCAAGCAACTAATAATGTCTTGAGATAATAATGCGTTTCCTGCTATAGTCATCTTCTATGAGTACCCTTTGCATTTTCTCTTTCTCATCTACGTACAATGCTTGCAGATGAGATGCCATTCTATGCTAGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGCAGTGGTTGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTATTTGAAAAGAGTGTAAGTTTTTTTCTTGTTAGGTCTATCATCAACCTTCTTTTTTTTTACCATATTTTAGGCCTCTAATTAATTGTTGCTACATTTTTTTAGTTTAATACAACTGCCTCACAAGATCGCCAAACTGACACCTGGGCTGACAAGTCCTCACTTCATACTGCATCTCAAAGTGTAATCTCCACCGAGTATCCTTCATCTGCAAAAAGAGAATCTTGTTTCTTGACCGAGAAACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAAGACCGACTACTTCCTGGAATTCGAGCATCAGGTGTTGGTGGTCGCTCTGGTGCACCTATTGTCACTCAGGTTGGTATAATAGCATGTTTTTCCAATTAGTGGTAGGAGGGAATGGTTTAGGTTGACTTAGTGAGGCAGCGAATTATCTCACTACTGAACTCCATAATCAACGAAACCAATCCATCACTGCATGTCCATTATTATAGTGTGATTTGTTTTTCCGCTTCTAGTCTCCAGGTCCAGGCAAGCAAGAAGCTTGTCACCTTTATATGTCATCGTGTCTTGGAGACACTAGGCCCAAAATTCATGAGATATTGCATGCATGCATTACTTAGCATAATGCTGAATGGAGGCATAGACAGTGGTTACGGAGTCTGTCTTTGTTATCTCTGATCAAGTCACCTCTTGCTGTTCCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCCGAGGACATCATTGGGGTTGGAGGACAAATATTGCATTCATCCGTCGTAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGATTACCTGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATAATTAACTTTCCCTTTTGACTAATAACTTCGTGGTTAAGAGCTTGTTATGGTCCATAGGGTTATGATGGAGTTCTCTGTTTGTCATGTCATGCAAAAAGTTCTTTTTATTTCATTTTGTAATATTTTCGTTGGCCGAAGATTTAGCCTCATTGCACCTGACAATTTTGGGTATTATAACTTTGCACTTCATTATGTTAACGAGGCTATTTGAAATTCTTATCAACAAGGGGAGAAAAAAAAGAAGAGGCTATTTGTAGCATAGATCTTGAACAGTATCTTTCAAATGTTTCATAAAACTCATTGCTTTACAGTTCACCCATGTTTTTCAATGTTGTAAAGTGGTGCATAAGTTTCTTGATCATTACTGGAAGTTGAAGAAAACGCTGAAAATTAGGAGTCTTTTCAATTCGAAATTAAATTTTTGTTATATCCATGGAACATTTACCACCACATAAGAATGGAAGCAGTGTTCTCCTGTTCTGTCCGTAGTTTTTGATCTTTCTGCTTTTGGTAGACTGTAGACATATGAAAAGGCCTGAAGGGATGGATTCTTAGTCCTCTGAACTATATTTTGGTTGGTATCAATCATGTGTTATGTTGCAAGGATTTGCAACATAGAAGGCTTCGTAAGTGAGGAGCATAAAAGGCCAAAGTAAAACATATAAAATGCCACTAACCGTGTGAAAGTCATAATGAAATGAGAAGCAAAATAAACTGAAAACTCTCCCTCATTTTTTATGATATGACAACGGACAAGACTGATTTTCAATGGTGTTTATTCATCCTCAAATATCTAGTTTACGAAAGGAAAGGATTGCGATGCTGATTTCCACATCAAGAGATCTCGAGTCGAATGGCACTATGGTGTTGAATAATGCATCTGTTGATTATCAAAAATTTGGTTGATATTTACATATGTATGTTTTTTGTTTTCCTTGCATTGTTCTTGTAGGAAGCAATAAGTGGCCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACAGGTTTGAGGTCATCCTACTCCCAGTTGGCTGGTTCAGGTTCATCCTACACTTCATCCTTATTGTCATCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAACCGATTGCTCTGCAGCTTCATATCCGCCGTGCGGATCTGATCCGCTTCTGATTAATTCTCATTAAGAGGATGAATGAATTATGTTGGAATGTAGTTTTTGTAAAGTCAGCCTAAATTAGTTGAAAACGTTTTTACCCCCCTTTGTCTCTGGCATATTGATACTGATTCAGCTGGGTAGATTTATCTTTTATGTTTTTTCAGTGTTGATGTGTTGTTTCTGAGTAGGTCATCAAATTTTCAGGAGAATTTTTCCACTGATCTTGTAGAATTCAAATCAACTTAAATCTTGATAAAACGGACTGTATTTCAGAATTCTTAAGTGGAAAGATTGGTGGGTGTCTTTTTATCGGAAAGAAGAAGAAAGAAAGGAAAAAAAGAAAAAGAAAAAAGCTGGTACGTTGAATGTGGAAGATTGTGTTGAAGCCAAGAAGAAGCATGGTTTATTGGAATTTGGAA

mRNA sequence

ATGGCCACCAACAAAACTGCAGAGAATGGCTCCACTGATGCAGCCGTCCTCAATTCTAACCCCCAAAGTTCGACGCTTGCCTCTGTAGCTGCTGCAGAGCTAGACTCCACGGAAGCCGGCGGCGGTGAATCCGACCTGGATCCCTCAAACCCAGAGTATTTATCGGCTCCCGCTGCGGATTCTGCAGCTCAGGAAGGCTTGAATCAAGCTGGCGCCTCCGAGAAAAAGTGGCCCGGATGGCCCGGGGACTGCGTATTCCGGCTTATAGTACCGGTTGTTAAGGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGACGTGTGAGGAAACGAGGGCCAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGCTAATTTCAGGAAAAGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAGCGTGTGTCTGGATTTTCTGAGAATGAAGATGATGCTAAAGCTTCATTTTGTTCAATCCGGTTACTGGTGGCATCAACTCAAGCAATTAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGCACAGGAGCTTCTGTGCGAGTATTATCAGGAGATGAGATGCCATTCTATGCTAGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGCAGTGGTTGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTATTTGAAAAGAGTTTTAATACAACTGCCTCACAAGATCGCCAAACTGACACCTGGGCTGACAAGTCCTCACTTCATACTGCATCTCAAAGTGTAATCTCCACCGAGTATCCTTCATCTGCAAAAAGAGAATCTTGTTTCTTGACCGAGAAACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAAGACCGACTACTTCCTGGAATTCGAGCATCAGGTGTTGGTGGTCGCTCTGGTGCACCTATTGTCACTCAGACAGTGGTTACGGAGTCTGTCTTTGTTATCTCTGATCAAGTCACCTCTTGCTGTTCCTGTCAGAGAGCAGGGATTACCTGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGTTTACGAAAGGAAAGGATTGCGATGCTGATTTCCACATCAAGAGATCTCGAGTCGAATGGCACTATGGAAGCAATAAGTGGCCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACAGGTTTGAGGTCATCCTACTCCCAGTTGGCTGGTTCAGAATTCTTAAGTGGAAAGATTGGTGGGTGTCTTTTTATCGGAAAGAAGAAGAAAGAAAGGAAAAAAAGAAAAAGAAAAAAGCTGGTACGTTGAATGTGGAAGATTGTGTTGAAGCCAAGAAGAAGCATGGTTTATTGGAATTTGGAA

Coding sequence (CDS)

ATGGCCACCAACAAAACTGCAGAGAATGGCTCCACTGATGCAGCCGTCCTCAATTCTAACCCCCAAAGTTCGACGCTTGCCTCTGTAGCTGCTGCAGAGCTAGACTCCACGGAAGCCGGCGGCGGTGAATCCGACCTGGATCCCTCAAACCCAGAGTATTTATCGGCTCCCGCTGCGGATTCTGCAGCTCAGGAAGGCTTGAATCAAGCTGGCGCCTCCGAGAAAAAGTGGCCCGGATGGCCCGGGGACTGCGTATTCCGGCTTATAGTACCGGTTGTTAAGGTCGGCAGCATTATTGGGCGCAAGGGCGATCTTATCAAGAAGACGTGTGAGGAAACGAGGGCCAGAATTCGTGTTCTTGATGGTGCCGTTGGCACTCCTGATCGCGTTGTGCTAATTTCAGGAAAAGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGTTATAAGAGTGTTCAAGCGTGTGTCTGGATTTTCTGAGAATGAAGATGATGCTAAAGCTTCATTTTGTTCAATCCGGTTACTGGTGGCATCAACTCAAGCAATTAATCTAATTGGAAAGCAAGGTTCATTAATCAAATCTATACAGGAGAGCACAGGAGCTTCTGTGCGAGTATTATCAGGAGATGAGATGCCATTCTATGCTAGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGCAGTGGTTGGCCACCTAAGGAAGTTTTTAGTTGATCATAGCGTTCTTCCTCTATTTGAAAAGAGTTTTAATACAACTGCCTCACAAGATCGCCAAACTGACACCTGGGCTGACAAGTCCTCACTTCATACTGCATCTCAAAGTGTAATCTCCACCGAGTATCCTTCATCTGCAAAAAGAGAATCTTGTTTCTTGACCGAGAAACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAAGACCGACTACTTCCTGGAATTCGAGCATCAGGTGTTGGTGGTCGCTCTGGTGCACCTATTGTCACTCAGACAGTGGTTACGGAGTCTGTCTTTGTTATCTCTGATCAAGTCACCTCTTGCTGTTCCTGTCAGAGAGCAGGGATTACCTGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGTTTACGAAAGGAAAGGATTGCGATGCTGATTTCCACATCAAGAGATCTCGAGTCGAATGGCACTATGGAAGCAATAAGTGGCCCCAAGGAACCAGTAACAAGCAGCAGCTATGGCAGGCTAGACACAGGTTTGAGGTCATCCTACTCCCAGTTGGCTGGTTCAGAATTCTTAAGTGGAAAGATTGGTGGGTGTCTTTTTATCGGAAAGAAGAAGAAAGAAAGGAAAAAAAGAAAAAGAAAAAAGCTGGTACGTTGAATGTGGAAGATTGTGTTGAAGCCAAGAAGAAGCATGGTTTATTGGAATTTGGAA

Protein sequence

MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAADSAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRESCFLTEKLILILIFHPLVFLSMDKTDYFLEFEHQVLVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQFTKGKDCDADFHIKRSRVEWHYGSNKWPQGTSNKQQLWQARHRFEVILLPVGWFRILKWKDWWVSFYRKEEERKEKKKKKKAGTLNVEDCVEAKKKHGLLEFGX

Homology

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BLAST of Sgr029842 vs. NCBI nr
Match: XP_022149911.1 (RNA-binding KH domain-containing protein PEPPER [Momordica charantia])

HSP 1 Score: 552.0 bits (1421), Expect = 5.3e-153
Identity = 312/420 (74.29%), Postives = 337/420 (80.24%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATNK AENGSTDA+ +NSNPQSSTL SVAAAELDSTEAGG ESDLDPSN +YLS PA+D
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S AQE  N  G+S+KKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK CEET+ARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA ADERMVELQGESLKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYP + KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300

Query: 301 CFLTEKLIL--------ILIF------------------HPLVFLSMDKTDYFLEFEHQV 360
            F   +  L        I ++                   P+V          L +   +
Sbjct: 301 LFHDRESHLDSHMASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGTNIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 410

[Close]

BLAST of Sgr029842 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 533.1 bits (1372), Expect = 2.6e-147
Identity = 305/420 (72.62%), Postives = 331/420 (78.81%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MAT  T ENGSTDA  LNSNPQSSTL+S+AAAE DSTEAGG ESD+DPSN +YLS PA+D
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           SAA EG N  GAS+KKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK CEETRARIRVL
Sbjct: 61  SAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEE +APLSPAMDAVIRVFKRVSG SENED+AKASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA ADERMVELQGESLKVLKALE V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQ DTWADKSSL TASQS+ISTEYP S KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRES 300

Query: 301 CFLTEKLIL--------ILIF------------------HPLVFLSMDKTDYFLEFEHQV 360
            FL  +  L        I ++                   P+V          L +   +
Sbjct: 301 LFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGTNIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 410

[Close]

BLAST of Sgr029842 vs. NCBI nr
Match: KAG6586109.1 (RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521.2 bits (1341), Expect = 1.0e-143
Identity = 298/420 (70.95%), Postives = 328/420 (78.10%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN T ENGSTDA  LNS+PQ   LA  AA E DSTEAGG ESD+DPSN +YLSAPA+D
Sbjct: 1   MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S   E  N AGAS+KKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK CEETRARIRVL
Sbjct: 61  SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+AKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA  DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD WADKSSL +ASQSVISTEYP S+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 CFLTEKLIL--------ILIFH------------------PLVFLSMDKTDYFLEFEHQV 360
            FL  +  L        I ++                   P+V          L +   +
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGANIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 407

[Close]

BLAST of Sgr029842 vs. NCBI nr
Match: XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.9 bits (1330), Expect = 1.9e-142
Identity = 295/420 (70.24%), Postives = 326/420 (77.62%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN T ENGSTDA  LNS+PQ   LA  AAAE DSTEAGG ESD+DPSN +YLSAPA+D
Sbjct: 1   MATNATTENGSTDADALNSSPQ---LACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
               E  N AGAS+KKWPGWPGDCVFR+IVPVVKVGSIIGR+GDLIKK CEETRARIRVL
Sbjct: 61  YVPHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+AKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA  DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD WADKSSL +ASQSVIS EYP S+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRES 300

Query: 301 CFLTEKLIL--------ILIFH------------------PLVFLSMDKTDYFLEFEHQV 360
            F   +  L        I ++                   P+V          L +   +
Sbjct: 301 LFFDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGANIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 407

[Close]

BLAST of Sgr029842 vs. NCBI nr
Match: XP_022938096.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 6.1e-141
Identity = 295/420 (70.24%), Postives = 325/420 (77.38%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN T ENGSTDA  LNS+ Q   LA  AA E DSTEA G ES +DPSN +YLSAPA+D
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S   E  N AGAS+KKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAP SPAMDAV+RVFKRVSGFSENED+AKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA  DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD+WADKSSL +ASQSVISTEYP S+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 CFLTEKLIL--------ILIFH------------------PLVFLSMDKTDYFLEFEHQV 360
            FL  +  L        I ++                   P+V          L +   +
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGANIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 407

[Close]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.8e-90
Identity = 192/345 (55.65%), Postives = 247/345 (71.59%), Query Frame = 0


Query: 72  ASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVV 131
           ++E++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKK CEETRARI+VLDG V TPDR+V
Sbjct: 62  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIV 121

Query: 132 LISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD----AKASFCSIRLLVASTQAINLI 191
           LISGKEEPEA +SPAMDAV+RVF+RVSG  +N+DD    A + F S+RLLVASTQAINLI
Sbjct: 122 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 181

Query: 192 GKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAVVGHLRKF 251
           GKQGSLIKSI E++GASVR+LS +E PFYA+ DER+V+LQGE+LK+LKALEA+VGHLR+F
Sbjct: 182 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 241

Query: 252 LVDHSVLPLFEKSFNTTASQDRQTDTWAD-KSSLHTASQSVISTEYPSSAKRESCFLTEK 311
           LVDH+V+PLFEK +    SQ RQ +  A+ KSSLHT S +++  ++   A+RE  FL   
Sbjct: 242 LVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERD 301

Query: 312 LILILIFHPLVFLSMDKTDYFLEFEHQVLVVALVHLLSLRQWLRSLSL------------ 371
             +     P   +S+   D  L   H    +A V    + Q  +++ +            
Sbjct: 302 SRVDSRVQP-SGVSIYSQDPVLSARHSP-GLARVSSAFVTQVSQTMQIPFSYAEDIIGVE 361

Query: 372 ---LSLI--KSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
              ++ I  +S   + ++E   PD+ITVEIKGT+SQVQ A+QLIQ
Sbjct: 362 GANIAYIRRRSGATITIKESPHPDQITVEIKGTTSQVQTAEQLIQ 404

[Close]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.0e-51
Identity = 144/384 (37.50%), Postives = 201/384 (52.34%), Query Frame = 0


Query: 51  PEYLSAPAADSAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTC 110
           PE+L +       ++     G  EK+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK  
Sbjct: 156 PEHLESLQKSEPEEDA--TVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIV 215

Query: 111 EETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKR-VSGFSENEDDA-K 170
           EETRARI++LDG  GT +R V++SGKEEPE+ L P+MD ++RV  R V G       A  
Sbjct: 216 EETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPP 275

Query: 171 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQG 230
            S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ G
Sbjct: 276 PSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 335

Query: 231 ESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTD-------TWADKSSLH 290
           E   V +ALE +  HLRKFLVD S++P FE   N      RQ D       +W      H
Sbjct: 336 EPTSVHRALELIASHLRKFLVDRSIIPFFE---NQMQKPTRQMDHMPPPHQSWGPPQG-H 395

Query: 291 TAS----------------QSVISTEYPSSAKRE-----------SCFLTEKLILILIFH 350
             S                     + YP    R+           S +  E  + + +  
Sbjct: 396 APSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 455

Query: 351 PLVFLSMDKTDYF---LEFEHQVLVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVRE-QG 395
               ++   T      L +   V+  +  ++   R+            S   V ++E +G
Sbjct: 456 APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRR-----------LSGATVTIQETRG 515

[Close]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-16
Identity = 52/195 (26.67%), Postives = 106/195 (54.36%), Query Frame = 0


Query: 83  DCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEPEAP 142
           D VF+++      G +IG  G +++    ET A I V +      +R++ ++  E PE  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 143 LSPAMDAVIRVFKRVSGFSENE--DDAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 202
            SPA  A++ +F R+   + N+  D+   S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 203 TGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAVVGHLRKFLVDHSVLPLFEKS 262
           TGA++++L  ++ P   S ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 263 FNTTASQ---DRQTD 273
            +   ++   DRQ+D
Sbjct: 631 SSALTTERFYDRQSD 645

[Close]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 55/156 (35.26%), Postives = 93/156 (59.62%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 146
           RL++   +VGSIIG+KG+ +KK  EE+ ARI + +G    P+R+V I+G   P   +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKA 108

Query: 147 MDAVIRVFKR--VSGFSENEDDAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS 206
              +   F+   ++  S +   +K    ++RL+V ++Q  +LIGK GS IK I+ESTGA 
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 168

Query: 207 VRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 241
           V+V +GD +P   ++ ER V + G    +++ ++ +
Sbjct: 169 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQI 194

[Close]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 55/156 (35.26%), Postives = 93/156 (59.62%), Query Frame = 0


Query: 87  RLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 146
           RL++   +VGSIIG+KG+ +KK  EE+ ARI + +G    P+R+V I+G   P   +  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG---PTDAIFKA 108

Query: 147 MDAVIRVFKR--VSGFSENEDDAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS 206
              +   F+   ++  S +   +K    ++RL+V ++Q  +LIGK GS IK I+ESTGA 
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 168

Query: 207 VRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 241
           V+V +GD +P   ++ ER V + G    +++ ++ +
Sbjct: 169 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQI 194

[Close]

BLAST of Sgr029842 vs. ExPASy TrEMBL
Match: A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 2.6e-153
Identity = 312/420 (74.29%), Postives = 337/420 (80.24%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATNK AENGSTDA+ +NSNPQSSTL SVAAAELDSTEAGG ESDLDPSN +YLS PA+D
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S AQE  N  G+S+KKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK CEET+ARIRVL
Sbjct: 61  SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD KASFCSIRLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA ADERMVELQGESLKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYP + KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRES 300

Query: 301 CFLTEKLIL--------ILIF------------------HPLVFLSMDKTDYFLEFEHQV 360
            F   +  L        I ++                   P+V          L +   +
Sbjct: 301 LFHDRESHLDSHMASSGISLYGQDRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGTNIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 410

[Close]

BLAST of Sgr029842 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 3.0e-141
Identity = 295/420 (70.24%), Postives = 325/420 (77.38%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN T ENGSTDA  LNS+ Q   LA  AA E DSTEA G ES +DPSN +YLSAPA+D
Sbjct: 1   MATNTTTENGSTDADALNSSAQ---LAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S   E  N AGAS+KKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK CEETRARIRVL
Sbjct: 61  SLPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAP SPAMDAV+RVFKRVSGFSENED+AKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA  DERMVELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQDRQTD+WADKSSL +ASQSVISTEYP S+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRES 300

Query: 301 CFLTEKLIL--------ILIFH------------------PLVFLSMDKTDYFLEFEHQV 360
            FL  +  L        I ++                   P+V          L +   +
Sbjct: 301 LFLDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGANIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 407

[Close]

BLAST of Sgr029842 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 6.6e-141
Identity = 297/421 (70.55%), Postives = 323/421 (76.72%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN   +NGSTDA  LN NP+SS LASVAAAE DS EAGG ESDLDPSN +YLSAPA+D
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SA-AQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRV 120
           SA   E  N   AS+KKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK CEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+PEAPLSPAMDAVIRVFKRV  FSENED+AK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYA ADERMVELQGESLKVLKALEA
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRE 300
           VVGHLRKFLVD SVLPLFEKSFNT  SQDRQ D WADKSSL TASQSVIS EYPSS KRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRE 300

Query: 301 SCFLTEKLIL--------ILIF------------------HPLVFLSMDKTDYFLEFEHQ 360
           S +L  +  L        I ++                   P+V          L +   
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 VLVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLI 395
           ++ V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLI
Sbjct: 361 IIGVGGTNIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLI 411

[Close]

BLAST of Sgr029842 vs. ExPASy TrEMBL
Match: A0A6J1HR76 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111465395 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 4.3e-140
Identity = 293/420 (69.76%), Postives = 324/420 (77.14%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN T ENGSTDA  LNS+PQ   LA  AA E DSTEAGG ESD+DPSN  YLSAPA+D
Sbjct: 1   MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQVYLSAPASD 60

Query: 61  SAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVL 120
           S   E  N A AS+KKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK CEETRARIRVL
Sbjct: 61  SVPHESPNHAVASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120

Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVAS 180
           DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+RVFKRVSGFSENED+AKASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVAS 180

Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAV 240
           TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYA  DERM+ELQGE+LKVLKALEAV
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMLELQGETLKVLKALEAV 240

Query: 241 VGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRES 300
           VGHLRKFLVDHSVLPLFEKSFNT ASQD QTD WADKSSL +AS+SVIS EYP S+KRES
Sbjct: 241 VGHLRKFLVDHSVLPLFEKSFNTPASQDCQTDAWADKSSLLSASRSVISNEYPPSSKRES 300

Query: 301 CFLTEKLIL--------ILIFH------------------PLVFLSMDKTDYFLEFEHQV 360
            F+  +  L        I ++                   P+V          L +   +
Sbjct: 301 LFIDRETHLDSHISSSGISLYGPDRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDI 360

Query: 361 LVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
           + V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLIQ
Sbjct: 361 IGVGGANIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLIQ 407

[Close]

BLAST of Sgr029842 vs. ExPASy TrEMBL
Match: A0A6J1EV22 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111436202 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 7.3e-140
Identity = 295/421 (70.07%), Postives = 322/421 (76.48%), Query Frame = 0


Query: 1   MATNKTAENGSTDAAVLNSNPQSSTLASVAAAELDSTEAGGGESDLDPSNPEYLSAPAAD 60
           MATN   +NGSTDA  LN NP+SS LASVAAAE DS EAGG ESDLDPSN +YLSAPA+D
Sbjct: 1   MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60

Query: 61  SA-AQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRV 120
           SA   E  N   AS+KKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKK CEETRARIRV
Sbjct: 61  SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDAKASFCSIRLLVA 180
           LDGAVGTPDRVVLISGKE+PEAPLSPAMDAVIRVFKRV  FSENED+AK SFCSIRLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180

Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEA 240
           STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYA ADERMVELQGESLKVLKALEA
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPSSAKRE 300
           VVGHLRKFLVD SVLPLFEKSFN   SQDRQ D WADKSSL T+SQSVIS EYPSS KRE
Sbjct: 241 VVGHLRKFLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRE 300

Query: 301 SCFLTEKLIL--------ILIF------------------HPLVFLSMDKTDYFLEFEHQ 360
           S +L  +  L        I ++                   P+V          L +   
Sbjct: 301 SLYLDREAYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAED 360

Query: 361 VLVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLI 395
           ++ V   ++  +R+   S ++L++ +S        +GLPDEITVEIKGTSSQVQMAQQLI
Sbjct: 361 IIGVGGTNIAFIRR--NSGAILTIQES--------RGLPDEITVEIKGTSSQVQMAQQLI 411

[Close]

BLAST of Sgr029842 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 334.7 bits (857), Expect = 1.2e-91
Identity = 192/345 (55.65%), Postives = 247/345 (71.59%), Query Frame = 0


Query: 72  ASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVV 131
           ++E++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKK CEETRARI+VLDG V TPDR+V
Sbjct: 62  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIV 121

Query: 132 LISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDD----AKASFCSIRLLVASTQAINLI 191
           LISGKEEPEA +SPAMDAV+RVF+RVSG  +N+DD    A + F S+RLLVASTQAINLI
Sbjct: 122 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 181

Query: 192 GKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQGESLKVLKALEAVVGHLRKF 251
           GKQGSLIKSI E++GASVR+LS +E PFYA+ DER+V+LQGE+LK+LKALEA+VGHLR+F
Sbjct: 182 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 241

Query: 252 LVDHSVLPLFEKSFNTTASQDRQTDTWAD-KSSLHTASQSVISTEYPSSAKRESCFLTEK 311
           LVDH+V+PLFEK +    SQ RQ +  A+ KSSLHT S +++  ++   A+RE  FL   
Sbjct: 242 LVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERD 301

Query: 312 LILILIFHPLVFLSMDKTDYFLEFEHQVLVVALVHLLSLRQWLRSLSL------------ 371
             +     P   +S+   D  L   H    +A V    + Q  +++ +            
Sbjct: 302 SRVDSRVQP-SGVSIYSQDPVLSARHSP-GLARVSSAFVTQVSQTMQIPFSYAEDIIGVE 361

Query: 372 ---LSLI--KSPLAVPVREQGLPDEITVEIKGTSSQVQMAQQLIQ 395
              ++ I  +S   + ++E   PD+ITVEIKGT+SQVQ A+QLIQ
Sbjct: 362 GANIAYIRRRSGATITIKESPHPDQITVEIKGTTSQVQTAEQLIQ 404

[Close]

BLAST of Sgr029842 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 203.0 bits (515), Expect = 5.7e-52
Identity = 144/384 (37.50%), Postives = 201/384 (52.34%), Query Frame = 0


Query: 51  PEYLSAPAADSAAQEGLNQAGASEKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKTC 110
           PE+L +       ++     G  EK+WPGWPG+ VFR++VP  KVGSIIGRKGD+IKK  
Sbjct: 156 PEHLESLQKSEPEEDA--TVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIV 215

Query: 111 EETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKR-VSGFSENEDDA-K 170
           EETRARI++LDG  GT +R V++SGKEEPE+ L P+MD ++RV  R V G       A  
Sbjct: 216 EETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPP 275

Query: 171 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYASADERMVELQG 230
            S  S RLLV ++QA +LIGKQG  +K+IQE++   VRVL  +++P +A  D+R+VE+ G
Sbjct: 276 PSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 335

Query: 231 ESLKVLKALEAVVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTD-------TWADKSSLH 290
           E   V +ALE +  HLRKFLVD S++P FE   N      RQ D       +W      H
Sbjct: 336 EPTSVHRALELIASHLRKFLVDRSIIPFFE---NQMQKPTRQMDHMPPPHQSWGPPQG-H 395

Query: 291 TAS----------------QSVISTEYPSSAKRE-----------SCFLTEKLILILIFH 350
             S                     + YP    R+           S +  E  + + +  
Sbjct: 396 APSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 455

Query: 351 PLVFLSMDKTDYF---LEFEHQVLVVALVHLLSLRQWLRSLSLLSLIKSPLAVPVRE-QG 395
               ++   T      L +   V+  +  ++   R+            S   V ++E +G
Sbjct: 456 APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRR-----------LSGATVTIQETRG 515

[Close]

BLAST of Sgr029842 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 103.2 bits (256), Expect = 6.1e-22
Identity = 63/214 (29.44%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 50  NPEYLSAPAADSAAQEGLNQAGASEKKWPGWP--------GDCVFRLIVPVVKVGSIIGR 109
           +P++  +    S  Q   +  G S++++ G           D VFR + PV K+GS+IGR
Sbjct: 8   SPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGR 67

Query: 110 KGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEP-------EAPLSPAMDAVIRVF 169
            GD++K+   +TR++IR+ +   G  +RV+ I    +        E  LSPA DA+ R+ 
Sbjct: 68  GGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIH 127

Query: 170 KRVSGFSENEDDAKASFCSI--RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE 229
            RV       +D+      +  +LLV S Q   ++G+ G ++++I+  TGA +R++    
Sbjct: 128 DRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRN 187

Query: 230 MPFYASADERMVELQGESLKVLKALEAVVGHLRK 247
           MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 188 MPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of Sgr029842 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 103.2 bits (256), Expect = 6.1e-22
Identity = 63/214 (29.44%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 50  NPEYLSAPAADSAAQEGLNQAGASEKKWPGWP--------GDCVFRLIVPVVKVGSIIGR 109
           +P++  +    S  Q   +  G S++++ G           D VFR + PV K+GS+IGR
Sbjct: 8   SPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGR 67

Query: 110 KGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEP-------EAPLSPAMDAVIRVF 169
            GD++K+   +TR++IR+ +   G  +RV+ I    +        E  LSPA DA+ R+ 
Sbjct: 68  GGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIH 127

Query: 170 KRVSGFSENEDDAKASFCSI--RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDE 229
            RV       +D+      +  +LLV S Q   ++G+ G ++++I+  TGA +R++    
Sbjct: 128 DRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRN 187

Query: 230 MPFYASADERMVELQGESLKVLKALEAVVGHLRK 247
           MP  A   + ++++ GE L V KAL  +   L +
Sbjct: 188 MPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]

BLAST of Sgr029842 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-18
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 89  IVPVVKVGSIIGRKGDLIKKTCEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMD 148
           I P   VG +IG+ G  I +  +ET A IRV        D ++ IS KE  E   SPA++
Sbjct: 249 ICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYE-DQSPAVN 308

Query: 149 AVIRVFKRVSGFSENEDDAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 208
           A IR+ +R S   +   DA     S RLLV+S+Q   LIGK G++I  ++  T A++R+L
Sbjct: 309 AAIRLQQRCS--EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRIL 368

Query: 209 SGDEMPFYASADERMVELQGESLKVLKALEAVVGHLR--KFLVDHSVLPL 257
             +++P  A  DE MV++ G     +KAL  V+  LR   F +DH ++ L
Sbjct: 369 QKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 415

The following BLAST results are available for this feature:

BLAST of Sgr029842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149911.1	5.3e-153	74.29	RNA-binding KH domain-containing protein PEPPER [Momordica charantia]	[more]
XP_038890982.1	2.6e-147	72.62	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
KAG6586109.1	1.0e-143	70.95	RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma...	[more]
XP_023538336.1	1.9e-142	70.24	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo...	[more]
XP_022938096.1	6.1e-141	70.24	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata]	[more]

BLAST of Sgr029842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	1.8e-90	55.65	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	8.0e-51	37.50	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	1.7e-16	26.67	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57721	2.3e-13	35.26	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	2.3e-13	35.26	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of Sgr029842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9V1	2.6e-153	74.29	RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FC72	3.0e-141	70.24	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K7W7	6.6e-141	70.55	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HR76	4.3e-140	69.76	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EV22	7.3e-140	70.07	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Sgr029842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.2e-91	55.65	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	5.7e-52	37.50	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	6.1e-22	29.44	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	6.1e-22	29.44	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	1.8e-18	37.65	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 82..155 e-value: 1.3E-8 score: 44.6 coord: 170..245 e-value: 8.5E-10 score: 48.5
None	No IPR available	GENE3D	3.30.310.210		coord: 83..248 e-value: 1.1E-29 score: 105.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 366..395
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 72..305
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 366..395
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 72..305
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 83..150 score: 13.334265
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 171..240 score: 13.690639
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 85..154 e-value: 2.06231E-19 score: 80.2131
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 173..241 e-value: 1.914E-17 score: 74.4351
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 174..240 e-value: 1.3E-10 score: 41.0 coord: 86..138 e-value: 1.4E-9 score: 37.7
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 168..251
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 77..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr029842.1	Sgr029842.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048581	negative regulation of post-embryonic development
biological_process	GO:2000242	negative regulation of reproductive process
biological_process	GO:0048585	negative regulation of response to stimulus
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:2000028	regulation of photoperiodism, flowering
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding