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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGTGAGAATCAATAACTCCAACCACACCACATTCTCTCATCATCATCCCCCTCCCCTCAACTTTTGTCCTCCTCCTTTCCCTTCACATATAAATGCCTTCTCCTTTTTAGTTTTCTGTCCCATCCACAGTTCATTCTCATTTGTAAATGTAAATATTCGATACTCGTTTCTTTTACTTGAAAATCAAGTTCTTTTATTTGAAAATCTAATTTTTGATGTCAAAGCATCTTTATTTCCTCTAAGAGGTTGTAAGTTCTTCTACTTTTATGATGTAAAATTCTTAAAAAATATACTCATTTCTTGTGATTTTAGTCTAATGCTTTTCCTTCAAATTCACCTCCTTGGAGCAAAGCCATAGTTCATTCTCATTTTATAGGGCATTGATACAAATATTTGATACCCTTTTCGTTCACTTGAAAAACTATTTTTTGTTATTTTACCGGTTCATTCTCATTTTATTAGGTTTTGATGCCAAATATTTGATACCCTTTTCCATTCACTTGAAAACCCATTTTCTTGGTATTTTAATACCATTGTTAGGTAATGGGAAATGGTTGTTTCTGTCACCAAAGATTAGAAAAGGAGGGAATATATTTTAAGCCCATCTCTTTTTGTTGCACTTCCAAGAATCTCTCTTGAACCCTTTGTACAATTCTAAGGAGGACCCTTTTTTTATTGCCATTTTGCTTTAAAGAGGTGGCTTATTTATTTAACATCATTTCATCAACCCCTCTGATTCGTTTTGAAGCATGGAGCCTATGGCAGGTAGAGTGTTGAAGGAGCTTATGACACATTATCTAGAAAGACTAAAATATTCCAAAAAGAGCAGCAAAAACTTGACCCATTGGAAGTTGCATTTAGTTTGGTTTTTGGAGGCTTACGCATGCAGATGGAGAAATCTCACCATACACATTGGATATATCCACATCCATTTGGGAAATTGTGCATCATTTCATTCTGCCCACGTGAACTCTTCAAGTTGCAGAAGCTGTTCCCTTGGATTTTCTCTCAAGTTGGGTGCTAATAAAATGAATCTTTCTCCTCATACAAACCGGAGAACCTAAAGACAAGCAACCACCAAAAAGGCTGGCTATTCTTTTCCTCATAGTGAAGGTTCTGTTTGGTATCAGAAATTCTGTACCGATACGAACTCATTGCTGGGTTTTTGGTTGTAACCGTGTTCATCCCATCACTAGAACAACAACAATCAACAACATCCAGATTCCATCAGCAATGTAAAACTAAAATAGTTAATATGTTTTTGCTTGCTACCATTTGGACAGCTTAAACATTTGGAATAGATTTTGCTCGGATGAACTCTTTGAGAATTGCTTTTTCTTCATCAATGCGTTTCTTCTCTTCACGATCTTTTGGCTTTATCTTTCGCTTTTCTTCCAAAATCCACTTGAAAAGTTCACGCTGCTGATCCACCGGGATTGGTTCTCTTACCTTCACAGGCCCCACAATGGCTGGCCTGGGCAATGATTCCTCAATAACAGGAGCAGTGTTGGCAGTTTTAGCTGTATCCGGGGCAGCTTCTTCTTCAACTACATGATCGTCTTGCTTCTTTGTCCTCATAAACAGATAAGCTACACAAATTAAGAATTATCTCAGTTCAAGCGAAAGCAAGTAAATGTTCCTAAAACAATGACAACTACTGAATCAAAAAAATTGCAAGATAGTAAATTTCCATGCCCAACCCCCCATACCACAAAAAGGTGAATCAAACCTCTTTGAATGTTTCTGCTATTCTATATTTCCTTGAACAGAGCACTCAATCTACAGCTGGTGGCAGAGAAAAAGAATAGCAGAGCTTGGCATGAAAGTGTCAGGGAATCAATCCATAGGCTTTTGAAATAACAATTGTACGTCATCCCCAATGGGAAATGAGAAGAAAGCATGTCTATCAAGAATTTATACATGCATATCATAATCTCAAATTAAGACACTAGATTATGTCCAAGGAGCACCATTACTCAATTCTCATGTTGTCAAATACCACATTTGGATAAGCATAAATAGAAACCAAATGATGTAGTTCAAGTACCCCAAAACTTGTCAATATATATATATATAGGAAAGGACTGTCTTGAGGGACAAAAGGAACCTAAGACAATGAAAGATATATTTATATACAGAAACACGATGATTGAAGCTCAAGACCCTCTTTTCCTCCTTACCCCTAAACCTTCACAACCCCCTAGATGGATTCAAGTAATGGAGTGAGATCAAACAGGTCCGTTTTATTAAGATTTCTTCTATCTCTCAAAAGACCAAAAAGTGGAACATCGAAGCAATAGAGGTTTCTTGGAAAGGTTTCTGAGGAATTTTCTTTCGAAAGGAAATTGAGCCACTTGGTTAATCAGAGGGTGGTTTCATTGGCTTTTGAAAAGGAGGTTTAGGTATCGGCAATTTGAAGCATAGAAGTGAAGCCTTATTATCAAAATGGGTTTGGAGATTTATTTATGAATCTGATCAGTTTTGGCACAACGTGGTTTGCAGTATCTATGGAAAGAATGAGGAAAATTAGTTTACTTTTCAAAGGAGTATATTTCAGAAATGGAAGAAGTCTATGGAAGAATATTTCAGAAATGATGAACATTGTATTTAGTAATTCAAAGATTAAGTGGGTAATAGTCGATTGCCTAGATTTTGAGAAGATGTTTGAGTGGGGGATGAATTTTCTTTGGTTGAAATGTTTCCAAGTTTGTATGGGGTGGAGTAGTCTAAATTCAATTTTGTTAATACGATGTGGGATTCTTCTTGTAGGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG mRNA sequence ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG Coding sequence (CDS) ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG Protein sequence MITLVALKRPPPIEGFAGQPRAFMSWNITIRTHVNTLWDFISSMKLFLIYIYIYIYIIRRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEENLCSAVWKGSSPKKVKA
Homology
BLAST of Sgr025288 vs. NCBI nr
Match: XP_022155195.1 (uncharacterized protein LOC111022333 [Momordica charantia]) HSP 1 Score: 55.8 bits (133), Expect = 3.2e-04 Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0 Query: 59 RRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEEN 118 RR+LKD+E F VLL LL + E D+RLW LE G F+V + + S L + Sbjct: 81 RRALKDDEIEEFSVLLYLLHSHSPSNELDRRLWSLEPSGMFSVASISKLCSASS--LPKA 140
Query: 119 LCSAVWKGSSPKKV 133 L A+WK SPKKV Sbjct: 141 LFKAIWKSKSPKKV 152
BLAST of Sgr025288 vs. ExPASy TrEMBL
Match: A0A6J1DLR8 (uncharacterized protein LOC111022333 OS=Momordica charantia OX=3673 GN=LOC111022333 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04 Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0 Query: 59 RRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEEN 118 RR+LKD+E F VLL LL + E D+RLW LE G F+V + + S L + Sbjct: 81 RRALKDDEIEEFSVLLYLLHSHSPSNELDRRLWSLEPSGMFSVASISKLCSASS--LPKA 140
Query: 119 LCSAVWKGSSPKKV 133 L A+WK SPKKV Sbjct: 141 LFKAIWKSKSPKKV 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155195.1 | 3.2e-04 | 44.59 | uncharacterized protein LOC111022333 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DLR8 | 1.6e-04 | 44.59 | uncharacterized protein LOC111022333 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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