Sgr025288 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr025288
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00004836: 1231673 .. 1234845 (+)
RNA-Seq ExpressionSgr025288
SyntenySgr025288
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGTGAGAATCAATAACTCCAACCACACCACATTCTCTCATCATCATCCCCCTCCCCTCAACTTTTGTCCTCCTCCTTTCCCTTCACATATAAATGCCTTCTCCTTTTTAGTTTTCTGTCCCATCCACAGTTCATTCTCATTTGTAAATGTAAATATTCGATACTCGTTTCTTTTACTTGAAAATCAAGTTCTTTTATTTGAAAATCTAATTTTTGATGTCAAAGCATCTTTATTTCCTCTAAGAGGTTGTAAGTTCTTCTACTTTTATGATGTAAAATTCTTAAAAAATATACTCATTTCTTGTGATTTTAGTCTAATGCTTTTCCTTCAAATTCACCTCCTTGGAGCAAAGCCATAGTTCATTCTCATTTTATAGGGCATTGATACAAATATTTGATACCCTTTTCGTTCACTTGAAAAACTATTTTTTGTTATTTTACCGGTTCATTCTCATTTTATTAGGTTTTGATGCCAAATATTTGATACCCTTTTCCATTCACTTGAAAACCCATTTTCTTGGTATTTTAATACCATTGTTAGGTAATGGGAAATGGTTGTTTCTGTCACCAAAGATTAGAAAAGGAGGGAATATATTTTAAGCCCATCTCTTTTTGTTGCACTTCCAAGAATCTCTCTTGAACCCTTTGTACAATTCTAAGGAGGACCCTTTTTTTATTGCCATTTTGCTTTAAAGAGGTGGCTTATTTATTTAACATCATTTCATCAACCCCTCTGATTCGTTTTGAAGCATGGAGCCTATGGCAGGTAGAGTGTTGAAGGAGCTTATGACACATTATCTAGAAAGACTAAAATATTCCAAAAAGAGCAGCAAAAACTTGACCCATTGGAAGTTGCATTTAGTTTGGTTTTTGGAGGCTTACGCATGCAGATGGAGAAATCTCACCATACACATTGGATATATCCACATCCATTTGGGAAATTGTGCATCATTTCATTCTGCCCACGTGAACTCTTCAAGTTGCAGAAGCTGTTCCCTTGGATTTTCTCTCAAGTTGGGTGCTAATAAAATGAATCTTTCTCCTCATACAAACCGGAGAACCTAAAGACAAGCAACCACCAAAAAGGCTGGCTATTCTTTTCCTCATAGTGAAGGTTCTGTTTGGTATCAGAAATTCTGTACCGATACGAACTCATTGCTGGGTTTTTGGTTGTAACCGTGTTCATCCCATCACTAGAACAACAACAATCAACAACATCCAGATTCCATCAGCAATGTAAAACTAAAATAGTTAATATGTTTTTGCTTGCTACCATTTGGACAGCTTAAACATTTGGAATAGATTTTGCTCGGATGAACTCTTTGAGAATTGCTTTTTCTTCATCAATGCGTTTCTTCTCTTCACGATCTTTTGGCTTTATCTTTCGCTTTTCTTCCAAAATCCACTTGAAAAGTTCACGCTGCTGATCCACCGGGATTGGTTCTCTTACCTTCACAGGCCCCACAATGGCTGGCCTGGGCAATGATTCCTCAATAACAGGAGCAGTGTTGGCAGTTTTAGCTGTATCCGGGGCAGCTTCTTCTTCAACTACATGATCGTCTTGCTTCTTTGTCCTCATAAACAGATAAGCTACACAAATTAAGAATTATCTCAGTTCAAGCGAAAGCAAGTAAATGTTCCTAAAACAATGACAACTACTGAATCAAAAAAATTGCAAGATAGTAAATTTCCATGCCCAACCCCCCATACCACAAAAAGGTGAATCAAACCTCTTTGAATGTTTCTGCTATTCTATATTTCCTTGAACAGAGCACTCAATCTACAGCTGGTGGCAGAGAAAAAGAATAGCAGAGCTTGGCATGAAAGTGTCAGGGAATCAATCCATAGGCTTTTGAAATAACAATTGTACGTCATCCCCAATGGGAAATGAGAAGAAAGCATGTCTATCAAGAATTTATACATGCATATCATAATCTCAAATTAAGACACTAGATTATGTCCAAGGAGCACCATTACTCAATTCTCATGTTGTCAAATACCACATTTGGATAAGCATAAATAGAAACCAAATGATGTAGTTCAAGTACCCCAAAACTTGTCAATATATATATATATAGGAAAGGACTGTCTTGAGGGACAAAAGGAACCTAAGACAATGAAAGATATATTTATATACAGAAACACGATGATTGAAGCTCAAGACCCTCTTTTCCTCCTTACCCCTAAACCTTCACAACCCCCTAGATGGATTCAAGTAATGGAGTGAGATCAAACAGGTCCGTTTTATTAAGATTTCTTCTATCTCTCAAAAGACCAAAAAGTGGAACATCGAAGCAATAGAGGTTTCTTGGAAAGGTTTCTGAGGAATTTTCTTTCGAAAGGAAATTGAGCCACTTGGTTAATCAGAGGGTGGTTTCATTGGCTTTTGAAAAGGAGGTTTAGGTATCGGCAATTTGAAGCATAGAAGTGAAGCCTTATTATCAAAATGGGTTTGGAGATTTATTTATGAATCTGATCAGTTTTGGCACAACGTGGTTTGCAGTATCTATGGAAAGAATGAGGAAAATTAGTTTACTTTTCAAAGGAGTATATTTCAGAAATGGAAGAAGTCTATGGAAGAATATTTCAGAAATGATGAACATTGTATTTAGTAATTCAAAGATTAAGTGGGTAATAGTCGATTGCCTAGATTTTGAGAAGATGTTTGAGTGGGGGATGAATTTTCTTTGGTTGAAATGTTTCCAAGTTTGTATGGGGTGGAGTAGTCTAAATTCAATTTTGTTAATACGATGTGGGATTCTTCTTGTAGGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG

mRNA sequence

ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG

Coding sequence (CDS)

ATGATTACTCTTGTGGCTTTGAAGCGTCCCCCACCAATTGAAGGGTTCGCTGGGCAGCCTCGTGCCTTCATGAGTTGGAATATCACAATAAGGACCCATGTTAATACATTGTGGGATTTCATTTCATCAATGAAATTGTTTCTTATATATATATATATATATATATATATCATAAGGAGAAGTTTGAAAGATGAGGAAGAAAGGGGGTTTGTTGTGTTACTAGATTTGTTGAAGACTAAAGAGCTGAAGGAGGAGGAAGATAAGAGACTTTGGGTACTGGAGGCTCCTGGACAGTTCACTGTAAGGTTTTTGGTAAGAAAATTATCTGATTGTGAAGTGGTGTTGGAGGAAAATTTGTGTTCTGCTGTTTGGAAAGGATCTAGCCCCAAAAAAGTTAAAGCCTAG

Protein sequence

MITLVALKRPPPIEGFAGQPRAFMSWNITIRTHVNTLWDFISSMKLFLIYIYIYIYIIRRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEENLCSAVWKGSSPKKVKA
Homology
[Close]
BLAST of Sgr025288 vs. NCBI nr
Match: XP_022155195.1 (uncharacterized protein LOC111022333 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-04
Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0 

Query: 59  RRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEEN 118
           RR+LKD+E   F VLL LL +     E D+RLW LE  G F+V  + +  S     L + 
Sbjct: 81  RRALKDDEIEEFSVLLYLLHSHSPSNELDRRLWSLEPSGMFSVASISKLCSASS--LPKA 140

Query: 119 LCSAVWKGSSPKKV 133
           L  A+WK  SPKKV
Sbjct: 141 LFKAIWKSKSPKKV 152

[Close]
BLAST of Sgr025288 vs. ExPASy TrEMBL
Match: A0A6J1DLR8 (uncharacterized protein LOC111022333 OS=Momordica charantia OX=3673 GN=LOC111022333 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0 

Query: 59  RRSLKDEEERGFVVLLDLLKTKELKEEEDKRLWVLEAPGQFTVRFLVRKLSDCEVVLEEN 118
           RR+LKD+E   F VLL LL +     E D+RLW LE  G F+V  + +  S     L + 
Sbjct: 81  RRALKDDEIEEFSVLLYLLHSHSPSNELDRRLWSLEPSGMFSVASISKLCSASS--LPKA 140

Query: 119 LCSAVWKGSSPKKV 133
           L  A+WK  SPKKV
Sbjct: 141 LFKAIWKSKSPKKV 152

The following BLAST results are available for this feature:
BLAST of Sgr025288 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155195.13.2e-0444.59uncharacterized protein LOC111022333 [Momordica charantia][more]
BLAST of Sgr025288 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr025288 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DLR81.6e-0444.59uncharacterized protein LOC111022333 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Sgr025288 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr025288.1Sgr025288.1mRNA