Sgr025083 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr025083
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionVascular-related unknown protein 1
Locationtig00003412: 1238803 .. 1239969 (+)
RNA-Seq ExpressionSgr025083
SyntenySgr025083
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGGAACTCGTCGGCAGAATTTGCGCGGAAGCAGTCAAAGTTTCTTTTTGGGGGATTCCTATTTGGTCATGGAATCGTATTCTGTTCCATGAAAATAATGTCGGAGTGTTGTTAGAACTATATTATATCTCATCTAAACCGCAAAGGTCAACCCACCCCTCCGCCCTATCATTTATGTCTCTTGCACGTTCTCTCTTTCTCTCTCCAAAGTCGTCTTTTTTTTTTTTTTTTTTTTCTGTTGGAACAGTTGGTTTTAACTTCCCCAACTTCTGCTGGTCCACTGCACCGATTCGACATCATGGACGACCTTTTTCCCCCATTTTCATCAGAGCAATAATGATAATAAATTTTGCATTTCAAATTATCAAGTCGTTTGATAAGGAGCTCTCTCTCACTCTGAACTCTCTCTCCTCTCTTCTTTTGACGGAGCAGAACGCAGCTGCAGGTATGGATCCGGCGCCCGAAAAGTACGCCGCCGCTAGCTCCGATGGAGTTGAAGAAGAAGAAGAGAGTGGTTGGACGGATTACTTGGAGGATTTCTCGTCAGAAATTGAGAGAGAAAGCAGTTTCTGTTCGAGTATTGGGAGCTGTTCTTGGGTTGTTAATAATTCAGATGCCAACACCAATGTTTTAATTCCGTTGTCTTCTGCTGGGGAGGTTTTGGAAACTCCTAAGAAGCTAAGTTTCAAGAAAACAAGAACCCAGAAGATTTTTGAAGATGATTCCTTGGAAGATACGGCTACTTCTCCTGTTCACAGTCCTAAAGTTAGCACACAAACCTCTCTCTCTCTCTCTTTCATTTTTTTTTTTTTTCTATTAATCTTATCATCTGAATATGTCTTAGGTTGGTGATTTGAGAGTGAGACCATCCCATGTAAATCCGAGGTTTGATGATCACATGATGATCAGTAGCTCTATGGTAATTGCTCTCTCACTCGTCTCTCTCTCTCTCTCTGTCTCTTGTGATTTGAGTGAGTTTTTTTTTTTTTTTTTTACCCCTTTTATAATGAGTTTTTGTAGGGCAGCGGAAGGAAGCCATGGGAGAATTATTATTCAGAGTCAGACACAGGAAAAGCTGTGTATCCTCCTCCTGCAGAACAACTAAAGAAAAGAGGGCTGTGCTTGTATCCTTTGTCCATGCTCCTTAATTACCACGGCTGA

mRNA sequence

ATGAAGAAGGAACTCGTCGGCAGAATTTGCGCGGAAGCAGTCAAAGTTTCTTTTTGGGGGATTCCTATTTGGTCATGGAATCGTATTCTGTTCCATGAAAATAATGTCGGAGTGTTGTTAGAACTATATTATATCTCATCTAAACCGCAAAGGTCAACCCACCCCTCCGCCCTATCATTTATGTCTCTTGCACGTTCTCTCTTTCTCTCTCCAAAGTCGTCTTTTTTTTTTTTTTTTTTTTCTGTTGGAACAGTTGGTTTTAACTTCCCCAACTTCTGCTGGTCCACTGCACCGATTCGACATCATGGACGACCTTTTTCCCCCATTTTCATCAGAGCAATAATGATAATAAATTTTGCATTTCAAATTATCAAGTCGTTTGATAAGGAGCTCTCTCTCACTCTGAACTCTCTCTCCTCTCTTCTTTTGACGGAGCAGAACGCAGCTGCAGGTATGGATCCGGCGCCCGAAAAGTACGCCGCCGCTAGCTCCGATGGAGTTGAAGAAGAAGAAGAGAGTGGTTGGACGGATTACTTGGAGGATTTCTCGTCAGAAATTGAGAGAGAAAGCAGTTTCTGTTCGAGTATTGGGAGCTGTTCTTGGGTTGTTAATAATTCAGATGCCAACACCAATGTTTTAATTCCGTTGTCTTCTGCTGGGGAGGTTTTGGAAACTCCTAAGAAGCTAAGTTTCAAGAAAACAAGAACCCAGAAGATTTTTGAAGATGATTCCTTGGAAGATACGGCTACTTCTCCTGTTCACAGTCCTAAAGTTGGTGATTTGAGAGTGAGACCATCCCATGTAAATCCGAGGTTTGATGATCACATGATGATCAGTAGCTCTATGGGCAGCGGAAGGAAGCCATGGGAGAATTATTATTCAGAGTCAGACACAGGAAAAGCTGTGTATCCTCCTCCTGCAGAACAACTAAAGAAAAGAGGGCTGTGCTTGTATCCTTTGTCCATGCTCCTTAATTACCACGGCTGA

Coding sequence (CDS)

ATGAAGAAGGAACTCGTCGGCAGAATTTGCGCGGAAGCAGTCAAAGTTTCTTTTTGGGGGATTCCTATTTGGTCATGGAATCGTATTCTGTTCCATGAAAATAATGTCGGAGTGTTGTTAGAACTATATTATATCTCATCTAAACCGCAAAGGTCAACCCACCCCTCCGCCCTATCATTTATGTCTCTTGCACGTTCTCTCTTTCTCTCTCCAAAGTCGTCTTTTTTTTTTTTTTTTTTTTCTGTTGGAACAGTTGGTTTTAACTTCCCCAACTTCTGCTGGTCCACTGCACCGATTCGACATCATGGACGACCTTTTTCCCCCATTTTCATCAGAGCAATAATGATAATAAATTTTGCATTTCAAATTATCAAGTCGTTTGATAAGGAGCTCTCTCTCACTCTGAACTCTCTCTCCTCTCTTCTTTTGACGGAGCAGAACGCAGCTGCAGGTATGGATCCGGCGCCCGAAAAGTACGCCGCCGCTAGCTCCGATGGAGTTGAAGAAGAAGAAGAGAGTGGTTGGACGGATTACTTGGAGGATTTCTCGTCAGAAATTGAGAGAGAAAGCAGTTTCTGTTCGAGTATTGGGAGCTGTTCTTGGGTTGTTAATAATTCAGATGCCAACACCAATGTTTTAATTCCGTTGTCTTCTGCTGGGGAGGTTTTGGAAACTCCTAAGAAGCTAAGTTTCAAGAAAACAAGAACCCAGAAGATTTTTGAAGATGATTCCTTGGAAGATACGGCTACTTCTCCTGTTCACAGTCCTAAAGTTGGTGATTTGAGAGTGAGACCATCCCATGTAAATCCGAGGTTTGATGATCACATGATGATCAGTAGCTCTATGGGCAGCGGAAGGAAGCCATGGGAGAATTATTATTCAGAGTCAGACACAGGAAAAGCTGTGTATCCTCCTCCTGCAGAACAACTAAAGAAAAGAGGGCTGTGCTTGTATCCTTTGTCCATGCTCCTTAATTACCACGGCTGA

Protein sequence

MKKELVGRICAEAVKVSFWGIPIWSWNRILFHENNVGVLLELYYISSKPQRSTHPSALSFMSLARSLFLSPKSSFFFFFFSVGTVGFNFPNFCWSTAPIRHHGRPFSPIFIRAIMIINFAFQIIKSFDKELSLTLNSLSSLLLTEQNAAAGMDPAPEKYAAASSDGVEEEEESGWTDYLEDFSSEIERESSFCSSIGSCSWVVNNSDANTNVLIPLSSAGEVLETPKKLSFKKTRTQKIFEDDSLEDTATSPVHSPKVGDLRVRPSHVNPRFDDHMMISSSMGSGRKPWENYYSESDTGKAVYPPPAEQLKKRGLCLYPLSMLLNYHG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136166.12.6e-3959.69uncharacterized protein LOC111007924 [Momordica charantia][more]
XP_038888852.11.7e-3553.65vascular-related unknown protein 1-like [Benincasa hispida][more]
XP_008455422.11.3e-3356.15PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo][more]
XP_011658705.14.4e-3154.55vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical pr... [more]
XP_022930798.12.1e-2562.81vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vas... [more]
Match NameE-valueIdentityDescription
Q9LSZ32.0e-1334.03Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ... [more]
Match NameE-valueIdentityDescription
A0A6J1C2S11.3e-3959.69uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A1S3C0F76.1e-3456.15uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=... [more]
A0A0A0K3L12.2e-3154.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1[more]
A0A6J1ESI71.0e-2562.81Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1[more]
A0A6J1JN612.0e-2461.34Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G21710.21.4e-1434.03unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT3G21710.12.1e-1044.76unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac... [more]
AT5G54790.17.6e-0530.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..265
NoneNo IPR availablePANTHERPTHR33974:SF2VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 161..327
IPR039280VASCULAR-RELATED UNKNOWN PROTEINPANTHERPTHR33974VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 161..327

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr025083.1Sgr025083.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010089 xylem development