Sgr024348 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr024348
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionYTH domain-containing protein
Locationtig00001291: 1936305 .. 1936673 (+)
RNA-Seq ExpressionSgr024348
SyntenySgr024348
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCCCCACCAGCATTTTTCACCACCGATCCTTTTGCAATCCTGCCTATTCCTCCTCTCCCTTCGCACACGACCACCTTCCCTCTTACATTGATGTTTGAAAGTGAGCCTTGAACACAAAACTCAGACCCTCTCTTTCCACTACTGCCCGCGTATACAAGTGGTAAGAATTTTGATTGGAAGTCACTCGGCTGGAAGAGAGATTCACCGACATAAACTTCACCATTTCCGAGCTTGGCTAATGCCACGATTGTTCGATCAGGAGTGCTTGCTCCAACTGTTAGAACCCAAGGTGCTTCATTGGATAATGTGCTTTTGAAAGGGCCTGAGTTTCCAGCAGAACAGCTGACAAAAATTCCCTTCTGA

mRNA sequence

ATGGCAGCCCCACCAGCATTTTTCACCACCGATCCTTTTGCAATCCTGCCTATTCCTCCTCTCCCTTCGCACACGACCACCTTCCCTCTTACATTGATGTTTGAAAGAGTGCTTGCTCCAACTGTTAGAACCCAAGGTGCTTCATTGGATAATGTGCTTTTGAAAGGGCCTGAGTTTCCAGCAGAACAGCTGACAAAAATTCCCTTCTGA

Coding sequence (CDS)

ATGGCAGCCCCACCAGCATTTTTCACCACCGATCCTTTTGCAATCCTGCCTATTCCTCCTCTCCCTTCGCACACGACCACCTTCCCTCTTACATTGATGTTTGAAAGAGTGCTTGCTCCAACTGTTAGAACCCAAGGTGCTTCATTGGATAATGTGCTTTTGAAAGGGCCTGAGTTTCCAGCAGAACAGCTGACAAAAATTCCCTTCTGA

Protein sequence

MAAPPAFFTTDPFAILPIPPLPSHTTTFPLTLMFERVLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF
Homology
BLAST of Sgr024348 vs. NCBI nr
Match: KAF4403978.1 (hypothetical protein G4B88_014434 [Cannabis sativa])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 37 VLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
          VLAPTVR QGASLD VLLKGPEFPAEQLT IPF
Sbjct: 2  VLAPTVRIQGASLDKVLLKGPEFPAEQLTNIPF 34

BLAST of Sgr024348 vs. NCBI nr
Match: KHG16057.1 (hypothetical protein F383_20744 [Gossypium arboreum])

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 37 VLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
          VLAPTVR+ GAS DNV+L+GPEFPAEQLT IPF
Sbjct: 2  VLAPTVRSHGASFDNVVLEGPEFPAEQLTNIPF 34

BLAST of Sgr024348 vs. NCBI nr
Match: TKR91083.1 (hypothetical protein D5086_0000225940 [Populus alba])

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-05
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 22  PSHTTTFP----LTLMFERVLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
           PS  + FP     T++  RVLAPTVR  G SLDNV+LKGP+F A QLT IPF
Sbjct: 399 PSIRSPFPSFAVATILLSRVLAPTVRIHGTSLDNVILKGPKFLATQLTNIPF 450

BLAST of Sgr024348 vs. NCBI nr
Match: KAF9869079.1 (hypothetical protein H0E87_027410 [Populus deltoides])

HSP 1 Score: 57.4 bits (137), Expect = 5.7e-05
Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 0

Query: 1   MAAPPAFFTTDPFAILP-IPPLPSH---TTTFPLTLMFERVLAPTVRTQGASLDNVLLKG 60
           M  P +  T  PF  +P +P LP H    +T+      E  L  TVR  GASLDNV+LKG
Sbjct: 77  MPPPISQKTILPFTSIPNLPKLPHHMKRNSTYLSCQHKEECLLQTVRIHGASLDNVMLKG 136

Query: 61  PEFPAEQLTKIPF 70
           PEFPA QLT IPF
Sbjct: 137 PEFPAAQLTNIPF 149

BLAST of Sgr024348 vs. ExPASy TrEMBL
Match: A0A7J6IAA8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_014434 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.6e-07
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 37 VLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
          VLAPTVR QGASLD VLLKGPEFPAEQLT IPF
Sbjct: 2  VLAPTVRIQGASLDKVLLKGPEFPAEQLTNIPF 34

BLAST of Sgr024348 vs. ExPASy TrEMBL
Match: A0A0B0NTS5 (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_20744 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.6e-06
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 37 VLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
          VLAPTVR+ GAS DNV+L+GPEFPAEQLT IPF
Sbjct: 2  VLAPTVRSHGASFDNVVLEGPEFPAEQLTNIPF 34

BLAST of Sgr024348 vs. ExPASy TrEMBL
Match: A0A4U5P5Z7 (YTH domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000225940 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.3e-06
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 22  PSHTTTFP----LTLMFERVLAPTVRTQGASLDNVLLKGPEFPAEQLTKIPF 70
           PS  + FP     T++  RVLAPTVR  G SLDNV+LKGP+F A QLT IPF
Sbjct: 399 PSIRSPFPSFAVATILLSRVLAPTVRIHGTSLDNVILKGPKFLATQLTNIPF 450

BLAST of Sgr024348 vs. ExPASy TrEMBL
Match: A0A371HIT4 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_13785 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.9e-04
Identity = 42/122 (34.43%), Postives = 46/122 (37.70%), Query Frame = 0

Query: 1   MAAPPAFFTTDPFAILPIPPLPSHTTTFPLTLMFER------------------------ 60
           +A PPAF T+ PF  L   P  SH TTFPLT  F +                        
Sbjct: 9   IATPPAFRTSCPFTTLGTFPPMSHNTTFPLTSTFFKDPGRQNAEELFPFEPAYKSGNKLG 68

Query: 61  -----------------------------VLAPTVRTQGASLDNVLLKGPEFPAEQLTKI 70
                                        VLAPTVR  GAS + VL  GP F AEQLTK 
Sbjct: 69  EKSLGWNNDSPSYSAPFPSTADAAIFLSIVLAPTVRIHGASFERVLYSGPAFAAEQLTKT 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF4403978.11.4e-0690.91hypothetical protein G4B88_014434 [Cannabis sativa][more]
KHG16057.11.2e-0581.82hypothetical protein F383_20744 [Gossypium arboreum][more]
TKR91083.11.5e-0559.62hypothetical protein D5086_0000225940 [Populus alba][more]
KAF9869079.15.7e-0550.68hypothetical protein H0E87_027410 [Populus deltoides][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7J6IAA86.6e-0790.91Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_014434 PE=4 SV=1[more]
A0A0B0NTS55.6e-0681.82Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_20744 PE=4 SV=1[more]
A0A4U5P5Z77.3e-0659.62YTH domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000225940 PE=4 ... [more]
A0A371HIT48.9e-0434.43Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_13785 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr024348.1Sgr024348.1mRNA