Sgr015330 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr015330
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00003412: 825213 .. 825692 (+)
RNA-Seq Expression	Sgr015330
Synteny	Sgr015330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGACCACACACAGCACAAGCACTGTTCGTCAACTCATCTCTTAAGAAAGAACACTAATGGCAATCAAACCAAATCCCAAAACCAATCCCATTCCCACGCCGTTCCTCACACCCGCATCCTTCTCAGTCGACGGTGGATTCGCGGCACCGGATTTTGTTGCGCTTTCGCTGTCAGCCGGAGGTTTATCCGCCGCCGGAGCCTGAGCTTTTGGAGGTGGTGCGGCGGTCTTGTTCCCGAAAAGCGCCTCAGGCAACAGAACTTGATCCACTTGGTAAACGGACAATGGAGCTTGCTCTCGGAGCTTGTTGTTGATCTGCACGGTGACGACGCCGGTGGACACGTTCACTTGGTTCCCTTGGCCGGTGAAGTTGAGGCCCCAGTCGCCGGCGAGAGTCCTGACGGGGTTGCTGACAGTCAGCAGCTGCGACAAGCTGTAGAACTGCATCAAAACCAAGATTTTAAAAATATGGATTAA

mRNA sequence

ATGACAGACCACACACAGCACAAGCACTGTTCGTCAACTCATCTCTTAAGAAAGAACACTAATGGCAATCAAACCAAATCCCAAAACCAATCCCATTCCCACGCCGTTCCTCACACCCGCATCCTTCTCAGTCGACGGTGGATTCGCGGCACCGGATTTTGTTGCGCTTTCGCTGTCAGCCGGAGGTTTATCCGCCGCCGGAGCCTGAGCTTTTGGAGGTGGTGCGGCGGTCTTGTTCCCGAAAAGCGCCTCAGGCAACAGAACTTGATCCACTTGGTAAACGGACAATGGAGCTTGCTCTCGGAGCTTGTTGTTGATCTGCACGGTGACGACGCCGGTGGACACGTTCACTTGGTTCCCTTGGCCGGTGAAGTTGAGGCCCCAGTCGCCGGCGAGAGTCCTGACGGGGTTGCTGACAGTCAGCAGCTGCGACAAGCTGTAGAACTGCATCAAAACCAAGATTTTAAAAATATGGATTAA

Coding sequence (CDS)

ATGACAGACCACACACAGCACAAGCACTGTTCGTCAACTCATCTCTTAAGAAAGAACACTAATGGCAATCAAACCAAATCCCAAAACCAATCCCATTCCCACGCCGTTCCTCACACCCGCATCCTTCTCAGTCGACGGTGGATTCGCGGCACCGGATTTTGTTGCGCTTTCGCTGTCAGCCGGAGGTTTATCCGCCGCCGGAGCCTGAGCTTTTGGAGGTGGTGCGGCGGTCTTGTTCCCGAAAAGCGCCTCAGGCAACAGAACTTGATCCACTTGGTAAACGGACAATGGAGCTTGCTCTCGGAGCTTGTTGTTGATCTGCACGGTGACGACGCCGGTGGACACGTTCACTTGGTTCCCTTGGCCGGTGAAGTTGAGGCCCCAGTCGCCGGCGAGAGTCCTGACGGGGTTGCTGACAGTCAGCAGCTGCGACAAGCTGTAGAACTGCATCAAAACCAAGATTTTAAAAATATGGATTAA

Protein sequence

MTDHTQHKHCSSTHLLRKNTNGNQTKSQNQSHSHAVPHTRILLSRRWIRGTGFCCAFAVSRRFIRRRSLSFWRWCGGLVPEKRLRQQNLIHLVNGQWSLLSELVVDLHGDDAGGHVHLVPLAGEVEAPVAGESPDGVADSQQLRQAVELHQNQDFKNMD

Homology

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BLAST of Sgr015330 vs. NCBI nr
Match: KAF7805979.1 (hypothetical protein G2W53_038140 [Senna tora])

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-06
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 43  LSRRWIRGTGFCCAFAVSRRFIRRRSLSFWRWCGG--LVPEKRLRQQNLIHLVNGQWSLL 102
           + RRW R +    + A+ RR  RR      R  GG  L  EK  RQQ+L+HLVN +  LL
Sbjct: 25  IMRRWSRTSVPALSGALRRR--RRSLRRLGRRSGGRRLGSEKLKRQQHLVHLVNRERELL 84

Query: 103 SELVVDLHGDDAGGHVHLVPLAGEVEAPVA----GESPDGVADSQQLRQAVE 149
            + +V+     A G VHL+ L GEVE P +    G    GVAD ++L + VE
Sbjct: 85  PDCIVNSRLHHAAGDVHLIALPGEVEPPASVVAGGLGSHGVADGEELGEGVE 134

The following BLAST results are available for this feature:

BLAST of Sgr015330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF7805979.1	2.4e-06	40.18	hypothetical protein G2W53_038140 [Senna tora]	[more]

BLAST of Sgr015330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr015330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr015330 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr015330.1	Sgr015330.1	mRNA