Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATCTCTCGAAGGGGTTGCGTAGTTCTCACTGTGTTGATCTTCACCATTTTCTTAGTTTCTCCACAACTTCTCGAGGCCGCGAGGGTTATGAAAGGAGAGGAATGGATGAAGAAGAAAGAAGATAGCTTTTTGTTACCTGTTCAAATCCTGCAGCGTGGGCCGGTGCCGCCGTCTGGTCGGAACCCATGCAGCAACATTCCCGGCCAAAGCAACGGCCGGTGCACCCTCCAGAGTATGAACGTTGCCGGCGGCTTCGTGCATGCAGCGCCTGCTATCCCGGACTCCGCTGATCTCCTTGCCTTCTTTCTTGACCGGACTCGGGGAACAGCCGCCCAAAGCTCTTGA
mRNA sequence
ATGGGTATCTCTCGAAGGGGTTGCGTAGTTCTCACTGTGTTGATCTTCACCATTTTCTTAGTTTCTCCACAACTTCTCGAGGCCGCGAGGGTTATGAAAGGAGAGGAATGGATGAAGAAGAAAGAAGATAGCTTTTTGTTACCTGTTCAAATCCTGCAGCGTGGGCCGGTGCCGCCGTCTGGTCGGAACCCATGCAGCAACATTCCCGGCCAAAGCAACGGCCGGTGCACCCTCCAGAGTATGAACGTTGCCGGCGGCTTCGTGCATGCAGCGCCTGCTATCCCGGACTCCGCTGATCTCCTTGCCTTCTTTCTTGACCGGACTCGGGGAACAGCCGCCCAAAGCTCTTGA
Coding sequence (CDS)
ATGGGTATCTCTCGAAGGGGTTGCGTAGTTCTCACTGTGTTGATCTTCACCATTTTCTTAGTTTCTCCACAACTTCTCGAGGCCGCGAGGGTTATGAAAGGAGAGGAATGGATGAAGAAGAAAGAAGATAGCTTTTTGTTACCTGTTCAAATCCTGCAGCGTGGGCCGGTGCCGCCGTCTGGTCGGAACCCATGCAGCAACATTCCCGGCCAAAGCAACGGCCGGTGCACCCTCCAGAGTATGAACGTTGCCGGCGGCTTCGTGCATGCAGCGCCTGCTATCCCGGACTCCGCTGATCTCCTTGCCTTCTTTCTTGACCGGACTCGGGGAACAGCCGCCCAAAGCTCTTGA
Protein sequence
MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPPSGRNPCSNIPGQSNGRCTLQSMNVAGGFVHAAPAIPDSADLLAFFLDRTRGTAAQSS
Homology
BLAST of Sgr015112 vs. NCBI nr
Match:
XP_022995941.1 (uncharacterized protein LOC111491306 [Cucurbita maxima])
HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKED-SFLLPVQILQRGPVPP 60
MG+S+R +V VL+FTI L +P +EAARVM GE+WMK K+D +F+LP+Q+LQR PVPP
Sbjct: 1 MGMSKRVSLVFFVLLFTILLPNP--MEAARVMSGEKWMKAKQDMAFVLPIQVLQRAPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGG---FVHAAPAIPDSADLLAFFLDRTRGTAAQSS 117
SGRNPCS IPGQSNGRCTLQ+MNVAGG FV A PAI D A + +AAQSS
Sbjct: 61 SGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPI---------ASAAQSS 109
BLAST of Sgr015112 vs. NCBI nr
Match:
XP_022931191.1 (uncharacterized protein LOC111437447 [Cucurbita moschata])
HSP 1 Score: 128.3 bits (321), Expect = 4.4e-26
Identity = 72/120 (60.00%), Postives = 87/120 (72.50%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKED-SFLLPVQILQRGPVPP 60
MG+S+R +V VL+ TI L +P +EAARVM G +WMK K+D +F+LP+Q+LQR PVPP
Sbjct: 1 MGMSKRVSLVFFVLMLTILLPNP--MEAARVMSGHKWMKAKQDIAFVLPIQVLQRAPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGG---FVHAAPAIPDSADLLAFFLDRTRGTAAQSS 117
SGRNPCS IPGQSNGRCTLQ+MNVAGG FV A PAI D A + +AAQSS
Sbjct: 61 SGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPI---------ASAAQSS 109
BLAST of Sgr015112 vs. NCBI nr
Match:
KAG6606390.1 (hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 121.7 bits (304), Expect = 4.2e-24
Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 0
Query: 15 IFTIFLVSPQLLEAARVMKGEEWMKKKED-SFLLPVQILQRGPVPPSGRNPCSNIPGQSN 74
+FTI L +P +EAARVM GE+WMK K+D +F+LP+Q+LQR PVPPSGRNPCS IPGQSN
Sbjct: 1 MFTILLPNP--MEAARVMSGEKWMKAKQDIAFVLPIQVLQRAPVPPSGRNPCSTIPGQSN 60
Query: 75 GRCTLQSMNVAGG---FVHAAPAIPDSADLLAFFLDRTRGTAAQSS 117
GRCTLQ+MNVAGG FV A PAI D A + +AAQSS
Sbjct: 61 GRCTLQTMNVAGGPARFVQAPPAIHDPAPI---------ASAAQSS 95
BLAST of Sgr015112 vs. NCBI nr
Match:
TKY61363.1 (hypothetical protein E2542_SST11214 [Spatholobus suberectus])
HSP 1 Score: 82.4 bits (202), Expect = 2.8e-12
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0
Query: 13 VLIFTIFLVSPQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPPSGRNPCSNIPGQS 72
V I L+S Q + AAR ++GE+W+ K L + LQRGPV PS RNPCS +PG+S
Sbjct: 10 VFTIVIVLLSLQKIRAARTLEGEQWLHKN-----LVLHSLQRGPVQPSQRNPCSTVPGRS 69
Query: 73 NGRCTLQSMNVAGGFVHAAPAIPD 97
G CTL ++NVAG VHA P D
Sbjct: 70 RGHCTLGAINVAGHVVHAPPLFQD 88
BLAST of Sgr015112 vs. NCBI nr
Match:
PNS89884.1 (hypothetical protein POPTR_019G013000 [Populus trichocarpa])
HSP 1 Score: 79.0 bits (193), Expect = 3.1e-11
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 0
Query: 1 MGISRRG-CVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPP 60
MG R+ C+ +T+ + +F + AAR ++GE+W+K+ L +Q L+RGPVPP
Sbjct: 1 MGSQRKNQCLTMTIFVAIVFGPCSHQILAARPLEGEQWLKQN----LGNIQSLRRGPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGGFV-HAAPAIPDS 98
SG + C++IPG+ +G C L MN AG V HA PA PD+
Sbjct: 61 SGGSSCTHIPGRGSGHCPLGEMNFAGHIVAHAPPAFPDA 95
BLAST of Sgr015112 vs. ExPASy TrEMBL
Match:
A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 8.7e-28
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKED-SFLLPVQILQRGPVPP 60
MG+S+R +V VL+FTI L +P +EAARVM GE+WMK K+D +F+LP+Q+LQR PVPP
Sbjct: 1 MGMSKRVSLVFFVLLFTILLPNP--MEAARVMSGEKWMKAKQDMAFVLPIQVLQRAPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGG---FVHAAPAIPDSADLLAFFLDRTRGTAAQSS 117
SGRNPCS IPGQSNGRCTLQ+MNVAGG FV A PAI D A + +AAQSS
Sbjct: 61 SGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPI---------ASAAQSS 109
BLAST of Sgr015112 vs. ExPASy TrEMBL
Match:
A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 72/120 (60.00%), Postives = 87/120 (72.50%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKED-SFLLPVQILQRGPVPP 60
MG+S+R +V VL+ TI L +P +EAARVM G +WMK K+D +F+LP+Q+LQR PVPP
Sbjct: 1 MGMSKRVSLVFFVLMLTILLPNP--MEAARVMSGHKWMKAKQDIAFVLPIQVLQRAPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGG---FVHAAPAIPDSADLLAFFLDRTRGTAAQSS 117
SGRNPCS IPGQSNGRCTLQ+MNVAGG FV A PAI D A + +AAQSS
Sbjct: 61 SGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPI---------ASAAQSS 109
BLAST of Sgr015112 vs. ExPASy TrEMBL
Match:
A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1)
HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKEDS---FLLP-VQILQRGP 60
MGIS++ +L F I + S Q++ ARVMK E+WMK++++ F+LP +Q+LQR P
Sbjct: 1 MGISQKN----VLLFFIILVASSQVMVGARVMKVEKWMKEEKNDHSVFVLPIIQVLQRAP 60
Query: 61 VPPSGRNPCSNIPGQSNGRCTLQSMNVAG-GFVHA-APAIPDSA 99
VPPSGRNPC+ IPGQSNGRCTLQ+MNVAG FVHA P IPDSA
Sbjct: 61 VPPSGRNPCTGIPGQSNGRCTLQTMNVAGHHFVHARPPPIPDSA 100
BLAST of Sgr015112 vs. ExPASy TrEMBL
Match:
B9I5L3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 0
Query: 1 MGISRRGCVVLTVLIFTIFLVS-PQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPP 60
MG RR + ++ TI L S Q + AAR ++GE W +K + +Q LQRGPVPP
Sbjct: 1 MGSQRRNQCLTVMIFVTIVLGSCSQQVLAARPLEGERWSEK----IVGNIQSLQRGPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGGFVH-AAPAIPDSADLLAFFLDRTRGTAAQSS 117
SG +PC++IPG+ +G+C+L MN AG V A PA PD+ T GT Q S
Sbjct: 61 SGGSPCTHIPGRGSGKCSLGEMNFAGHTVALAPPAFPDAIMNFGAAASTTSGTHKQDS 114
BLAST of Sgr015112 vs. ExPASy TrEMBL
Match:
U5FE77 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G013000 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 0
Query: 1 MGISRRG-CVVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPP 60
MG R+ C+ +T+ + +F + AAR ++GE+W+K+ L +Q L+RGPVPP
Sbjct: 1 MGSQRKNQCLTMTIFVAIVFGPCSHQILAARPLEGEQWLKQN----LGNIQSLRRGPVPP 60
Query: 61 SGRNPCSNIPGQSNGRCTLQSMNVAGGFV-HAAPAIPDS 98
SG + C++IPG+ +G C L MN AG V HA PA PD+
Sbjct: 61 SGGSSCTHIPGRGSGHCPLGEMNFAGHIVAHAPPAFPDA 95
BLAST of Sgr015112 vs. TAIR 10
Match:
AT2G31345.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06135.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 42.4 bits (98), Expect = 3.0e-04
Identity = 30/68 (44.12%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 9 VVLTVLIFTIFLVSPQLLEAARVMKGEEWMKKKEDSFLLPVQILQRGPVPPSGRNPCSNI 68
VV+ V++F +FL + Q +EA R D L Q LQRGPV SGRN C+NI
Sbjct: 9 VVMLVVMFVVFLDATQ-VEAMRP------FPDPVDEIRLLFQALQRGPVRGSGRNGCTNI 68
Query: 69 PGQSNGRC 77
P + +GRC
Sbjct: 69 P-RGSGRC 68
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022995941.1 | 1.8e-27 | 61.67 | uncharacterized protein LOC111491306 [Cucurbita maxima] | [more] |
XP_022931191.1 | 4.4e-26 | 60.00 | uncharacterized protein LOC111437447 [Cucurbita moschata] | [more] |
KAG6606390.1 | 4.2e-24 | 63.21 | hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TKY61363.1 | 2.8e-12 | 50.00 | hypothetical protein E2542_SST11214 [Spatholobus suberectus] | [more] |
PNS89884.1 | 3.1e-11 | 42.42 | hypothetical protein POPTR_019G013000 [Populus trichocarpa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1K3A7 | 8.7e-28 | 61.67 | uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306... | [more] |
A0A6J1ET04 | 2.1e-26 | 60.00 | uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC1114374... | [more] |
A0A0A0LCX8 | 1.6e-21 | 59.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1 | [more] |
B9I5L3 | 1.5e-11 | 42.37 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 ... | [more] |
U5FE77 | 1.5e-11 | 42.42 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G013000 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G31345.1 | 3.0e-04 | 44.12 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |