Sgr014368 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr014368
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00000289: 834771 .. 835147 (+)
RNA-Seq Expression	Sgr014368
Synteny	Sgr014368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAAGTTTATAACTCACCGCCTCTCTGGAAACCCTTCCGCCGTCTAAATGATGACAGGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG

mRNA sequence

ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAAGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG

Coding sequence (CDS)

ATGGCGCCACCTCCAGCGGCGTACCTAGTTTTTGCCATTTTGGTCGCATCCATCTCTCCAAGCTCGCCGTCCAGAGCCGCCGCAAACTACGGTAACTCTTTCCTCCTCCTCCGCCGGCGCCACCAGAGAAGCTCCACCGTCCACTCCTATTCGGACACCACAGCTCTCCCCCGCCGTCTCCGCCGGCAAACGAGTCACCTTCTCCACAAGAACAACAAGTGCTCCGATTTGGAAGCATCCGGAAATGGAGATAAAGATCCAGAGCTGAAACAGGACCCTTGGCCGGAATGCCCCGTCCTTAAATTGCCACCACCTCCATTCTAG

Protein sequence

MAPPPAAYLVFAILVASISPSSPSRAAANYGNSFLLLRRRHQRSSTVHSYSDTTALPRRLRRQTSHLLHKNNKCSDLEASGNGDKDPELKQDPWPECPVLKLPPPPF

Homology

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BLAST of Sgr014368 vs. ExPASy TrEMBL
Match: A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.3e-05
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 4   PPAAYLVFAIL--VASISPSSPS---RAAANYGNSF-------LLLRRRHQRSSTVHSYS 63
           PP AYL  AIL  VAS SPSS S    AA +YG  +       LL    H       +  
Sbjct: 3   PPLAYLFLAILLAVASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAE 62

Query: 64  DTTA-LPRRLRRQTSHLLHKNNKCSDLEASGNGDKDPELKQDPWPECPVLKLPPPPF 108
           +  A  PRR+  +      + +KCS  EA  NG+KD +  +DPWP+CPV K PPPPF
Sbjct: 63  EYPAKSPRRVNGE------RKDKCS--EAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 111

The following BLAST results are available for this feature:

BLAST of Sgr014368 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr014368 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr014368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEF9	7.3e-05	41.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1	[more]

BLAST of Sgr014368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr014368.1	Sgr014368.1	mRNA