Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAAGGTATTGAAATTGGCGGAAAACTTGGACGGAGTGGCGAGGAGACGGCTCCCCCGCCGGCTGATGAGAATCGGTTGGTCGTCAACGAGGTCGAATTCTTTTCCGACAAGAAACCCACTAATGTTATCACCACTATCAATAAAGAAGGTGGCTTCAATATTGTGAACATAAGCTTCCTAAATGCACAACAAAAGCTTTCTCAACTCCCGTAGCTTTACAGAAACATCGGTGCTAAATGGGTTTCCTTTAAAAATTCAGATTGGCTTGCACCTGCTGACTCTAATACTGGAAGCGATCGATCGATGGTGGATGATGGGATTTCATGGGATGGTGAAGACAAGCCAGCCAAAAACTGAGGTAATTGGATAGCCAAACATCAAGAATTGTTACCCCCTTTAGTGTCCCTTTTTCTTTTTCTTTTCTGGGAACTAATTAGAAATTAAAAGTTAATTCCAAAAGTCATCCCCCATGTTTAATATATTTTTTATTAATAGTTAATTCAAATAATAATTAATTGTAAATTAAAAGTAAATGTTATAGTTAATGAATTACAATTATCAAAAACAAGTGTAAAGTGTAAAGGTTGGGACTTGGAAAGATCCAAAGGCCTAGCATTAAATTATTAGCATAATATAAATAGCCTAAGCATGCAAACAACTCACATCCTTCTCCACATCCCACATATATTATAAGTTTCTCAATAATTTTTGGGTCTCTCGAATTTTTTTTTGTCGACAATCTTGAAATTTTGTAGAAAGAATGATAATCATGGTTCTTTAAAAAGGAAAAAAAGAAGTGCTACAAAAGTGTGTCGACAGTGATGATAAAAGGTAGGAAAAAATCAATTTATACCCCTAAACTTTGCAGGTTGAATCAATTAAAATTCTAAACTAATAATTGCATCAATTAAAACCGTAAACTTACATAAGTTGTTAGAGTTCCGTTTGAAAAATGTTAGTAAAGTTGGGCTACATGTGAAGAAAGATACAACTATTATTTTATATTAAAAAAGGAAAAATTAGCTACTATTTTATAATGTATTTTATATTAGAAAAGAGAAAAACGTGATCATATTACTTTTTCTTGTTGAAGAAGAAATCCCTTAATTTTTTGAAGGAAGAGAATAGAAAAGAGAGAGAAGAGGCAAGGAGGAGATGACGAAGACGAGGAGGTGCTTCTTTTCTAGTTCGAGACAAAAAACGTGTTGCATGCATAATCAATTTGGGTGATTTGTTTATTTTATATCGATGGAAGAAGTATTCTTCACATTATTCTTGCACTATGGGGGACAGTTTGTCAAAAAGGATAAACTTTTGTACATAGGGGTGAAGTTAGGGGGGCTAAAAACTGTAACTCAGATGAGATGTCTATGCCAGAAGTTGAGGGAATTCTAAAGGAATTTGGGATTAGGGAATGGACTAAATTTCATTACTTAATCATAGGTTTAGATTTTGAAAGGGGGCTTAAATTGTTGTGGACTGATAAGAAGATTATGAATATGCTAAAATCTTTGACACCAATTAAGCAAATGCATATATATATTGAACATGTTGAGATAGTTAATATCGAAGAAGGGGAGGTAGAAAAAGGGGTGGATGTTGTTATACTAAGGGGTGAGAGTTTATCTTCGAAGGAGGACACCAGTGATAAAAGTGTGGACATGAATGACATTGTAGATAGTGATTATGAAATACTTGATGACAATATTCTTTTTGATGAAAATGTGGATGAGCATGAGGTTGGGTTAGAGGGAAGTATGGAAGGGGTGGGACATGAGAACTTAGGAAGAAGTGGTATGATGCAAATAAAAAGGTTGGGAGTGTATGATGAGGTTGATTTTGAACCTATGGATGATGGGATGCAGTCCCATTATGCATCATCTAAGGAATTACATTTTCCTTGCCACTCTAATGATGAAAGGGATGATGAAAGATGA
mRNA sequence
ATGTTTGAAGGTATTGAAATTGGCGGAAAACTTGGACGGAGTGGCGAGGAGACGGCTCCCCCGCCGGCTGATGAGAATCGGTTGGTCGTCAACGAGGTCGAATTCTTTTCCGACAAGAAACCCACTAATGTTATCACCACTATCAATAAAGAAGATTGGCTTGCACCTGCTGACTCTAATACTGGAAGCGATCGATCGATGGTGGATGATGGGATTTCATGGGATGATGAGATGTCTATGCCAGAAGTTGAGGGAATTCTAAAGGAATTTGGGATTAGGGAATGGACTAAATTTCATTACTTAATCATAGGTTTAGATTTTGAAAGGGGGCTTAAATTGTTGTGGACTGATAAGAAGATTATGAATATGCTAAAATCTTTGACACCAATTAAGCAAATGCATATATATATTGAACATGTTGAGATAGTTAATATCGAAGAAGGGGAGGTAGAAAAAGGGGTGGATGTTGTTATACTAAGGGGTGAGAGTTTATCTTCGAAGGAGGACACCAGTGATAAAAGTGTGGACATGAATGACATTGTAGATAGTGATTATGAAATACTTGATGACAATATTCTTTTTGATGAAAATGTGGATGAGCATGAGGTTGGGTTAGAGGGAAGTATGGAAGGGGTGGGACATGAGAACTTAGGAAGAAGTGGTATGATGCAAATAAAAAGGTTGGGAGTGTATGATGAGGTTGATTTTGAACCTATGGATGATGGGATGCAGTCCCATTATGCATCATCTAAGGAATTACATTTTCCTTGCCACTCTAATGATGAAAGGGATGATGAAAGATGA
Coding sequence (CDS)
ATGTTTGAAGGTATTGAAATTGGCGGAAAACTTGGACGGAGTGGCGAGGAGACGGCTCCCCCGCCGGCTGATGAGAATCGGTTGGTCGTCAACGAGGTCGAATTCTTTTCCGACAAGAAACCCACTAATGTTATCACCACTATCAATAAAGAAGATTGGCTTGCACCTGCTGACTCTAATACTGGAAGCGATCGATCGATGGTGGATGATGGGATTTCATGGGATGATGAGATGTCTATGCCAGAAGTTGAGGGAATTCTAAAGGAATTTGGGATTAGGGAATGGACTAAATTTCATTACTTAATCATAGGTTTAGATTTTGAAAGGGGGCTTAAATTGTTGTGGACTGATAAGAAGATTATGAATATGCTAAAATCTTTGACACCAATTAAGCAAATGCATATATATATTGAACATGTTGAGATAGTTAATATCGAAGAAGGGGAGGTAGAAAAAGGGGTGGATGTTGTTATACTAAGGGGTGAGAGTTTATCTTCGAAGGAGGACACCAGTGATAAAAGTGTGGACATGAATGACATTGTAGATAGTGATTATGAAATACTTGATGACAATATTCTTTTTGATGAAAATGTGGATGAGCATGAGGTTGGGTTAGAGGGAAGTATGGAAGGGGTGGGACATGAGAACTTAGGAAGAAGTGGTATGATGCAAATAAAAAGGTTGGGAGTGTATGATGAGGTTGATTTTGAACCTATGGATGATGGGATGCAGTCCCATTATGCATCATCTAAGGAATTACATTTTCCTTGCCACTCTAATGATGAAAGGGATGATGAAAGATGA
Protein sequence
MFEGIEIGGKLGRSGEETAPPPADENRLVVNEVEFFSDKKPTNVITTINKEDWLAPADSNTGSDRSMVDDGISWDDEMSMPEVEGILKEFGIREWTKFHYLIIGLDFERGLKLLWTDKKIMNMLKSLTPIKQMHIYIEHVEIVNIEEGEVEKGVDVVILRGESLSSKEDTSDKSVDMNDIVDSDYEILDDNILFDENVDEHEVGLEGSMEGVGHENLGRSGMMQIKRLGVYDEVDFEPMDDGMQSHYASSKELHFPCHSNDERDDER
Homology
BLAST of Sgr001804 vs. NCBI nr
Match:
RXH99414.1 (hypothetical protein DVH24_011739 [Malus domestica])
HSP 1 Score: 72.4 bits (176), Expect = 6.6e-09
Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 44 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 103
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWDDEMSMPEVEGILK-EFGIREW 120
++ KE+W L +NTGSD+SMVDDGIS D ++ +K EF I +
Sbjct: 104 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSDHGVNKRAKNHEIKVEFSI--F 163
Query: 121 TKFHYLIIGLDFERGLKLLWTDKKIMN 123
Y ++G+D++ L L + + MN
Sbjct: 164 RLMVYSVVGVDYDDQLAQLQVEVQRMN 188
BLAST of Sgr001804 vs. NCBI nr
Match:
AQX45438.1 (WRKY transcription factor 2-like protein [Luffa aegyptiaca])
HSP 1 Score: 71.2 bits (173), Expect = 1.5e-08
Identity = 49/108 (45.37%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEET-APPPADENRLVVNEVEFFSDKK--------------PTNVI 60
MF+GIE GKLGR+ ++ AP P+DENRLVVNEV+FFSDKK N+I
Sbjct: 34 MFQGIEFSGKLGRTDDDNPAPLPSDENRLVVNEVDFFSDKKRVVDDTREDQDSKSSINII 93
Query: 61 -TTINKED---------------WLAPADSNTGSDRSMVDDGISWDDE 78
T +NK+D L +NTGSD+S V DGIS D E
Sbjct: 94 ATAVNKDDKNLTAPRTGFNLVNTGLHLLTANTGSDQSTVSDGISSDGE 141
BLAST of Sgr001804 vs. NCBI nr
Match:
XP_022142052.1 (probable WRKY transcription factor 31 [Momordica charantia])
HSP 1 Score: 70.1 bits (170), Expect = 3.3e-08
Identity = 50/112 (44.64%), Postives = 60/112 (53.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETA---PPPADENRLVVNEVEFFS-------------DKKPTNV 60
MF+GIE GKLGR+ + A PP D NRL VNEV+FFS D KPTN+
Sbjct: 37 MFQGIEFPGKLGRTDHDDAAAPTPPDDNNRLAVNEVDFFSDNKRVLDDREDHQDSKPTNI 96
Query: 61 ITT---INK--EDWLAP--------------ADSNTGSDRSMVDDGISWDDE 78
+TT +NK + LAP +NTGSD+S VDDGIS D E
Sbjct: 97 VTTTTGVNKLEDKILAPPRPAFNIVNTGLHLLTANTGSDQSTVDDGISSDGE 148
BLAST of Sgr001804 vs. NCBI nr
Match:
XP_008364089.2 (probable WRKY transcription factor 31 [Malus domestica])
HSP 1 Score: 65.5 bits (158), Expect = 8.1e-07
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 44 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 103
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWD 76
++ KE+W L +NTGSD+SMVDDGIS D
Sbjct: 104 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSD 142
BLAST of Sgr001804 vs. NCBI nr
Match:
QDL95023.1 (group IIb WRKY transcription factor [Malus domestica])
HSP 1 Score: 65.5 bits (158), Expect = 8.1e-07
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 44 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 103
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWD 76
++ KE+W L +NTGSD+SMVDDGIS D
Sbjct: 104 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSD 142
BLAST of Sgr001804 vs. ExPASy TrEMBL
Match:
A0A498K0F0 (WRKY domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_011739 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 3.2e-09
Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 44 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 103
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWDDEMSMPEVEGILK-EFGIREW 120
++ KE+W L +NTGSD+SMVDDGIS D ++ +K EF I +
Sbjct: 104 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSDHGVNKRAKNHEIKVEFSI--F 163
Query: 121 TKFHYLIIGLDFERGLKLLWTDKKIMN 123
Y ++G+D++ L L + + MN
Sbjct: 164 RLMVYSVVGVDYDDQLAQLQVEVQRMN 188
BLAST of Sgr001804 vs. ExPASy TrEMBL
Match:
A0A1S6YJD5 (WRKY transcription factor 2-like protein OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 7.2e-09
Identity = 49/108 (45.37%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEET-APPPADENRLVVNEVEFFSDKK--------------PTNVI 60
MF+GIE GKLGR+ ++ AP P+DENRLVVNEV+FFSDKK N+I
Sbjct: 34 MFQGIEFSGKLGRTDDDNPAPLPSDENRLVVNEVDFFSDKKRVVDDTREDQDSKSSINII 93
Query: 61 -TTINKED---------------WLAPADSNTGSDRSMVDDGISWDDE 78
T +NK+D L +NTGSD+S V DGIS D E
Sbjct: 94 ATAVNKDDKNLTAPRTGFNLVNTGLHLLTANTGSDQSTVSDGISSDGE 141
BLAST of Sgr001804 vs. ExPASy TrEMBL
Match:
A0A6J1CLJ7 (probable WRKY transcription factor 31 OS=Momordica charantia OX=3673 GN=LOC111012275 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 50/112 (44.64%), Postives = 60/112 (53.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETA---PPPADENRLVVNEVEFFS-------------DKKPTNV 60
MF+GIE GKLGR+ + A PP D NRL VNEV+FFS D KPTN+
Sbjct: 37 MFQGIEFPGKLGRTDHDDAAAPTPPDDNNRLAVNEVDFFSDNKRVLDDREDHQDSKPTNI 96
Query: 61 ITT---INK--EDWLAP--------------ADSNTGSDRSMVDDGISWDDE 78
+TT +NK + LAP +NTGSD+S VDDGIS D E
Sbjct: 97 VTTTTGVNKLEDKILAPPRPAFNIVNTGLHLLTANTGSDQSTVDDGISSDGE 148
BLAST of Sgr001804 vs. ExPASy TrEMBL
Match:
A0A7S5AU12 (Group IIb WRKY transcription factor OS=Malus domestica OX=3750 GN=WRKY39 PE=2 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 3.9e-07
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 44 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 103
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWD 76
++ KE+W L +NTGSD+SMVDDGIS D
Sbjct: 104 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSD 142
BLAST of Sgr001804 vs. ExPASy TrEMBL
Match:
V9MH48 (WRKY transcription factor 42 OS=Malus hupehensis OX=106556 PE=2 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 3.9e-07
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1 MFEGIEIGGKLGRSGEETAPPPA-DENRLVVNEVEFFSDKK---------------PTNV 60
MF+G+E KLGR E+ A P+ D NR+VV+EV+FFSD+K +N
Sbjct: 1 MFQGMEFPVKLGRREEQDASQPSNDNNRMVVDEVDFFSDRKNKLNTNSTDDHHQDSKSNG 60
Query: 61 ITTINKEDW--------LAPADSNTGSDRSMVDDGISWD 76
++ KE+W L +NTGSD+SMVDDGIS D
Sbjct: 61 AVSVKKENWTGLDVNTGLQLVTANTGSDQSMVDDGISSD 99
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RXH99414.1 | 6.6e-09 | 36.05 | hypothetical protein DVH24_011739 [Malus domestica] | [more] |
AQX45438.1 | 1.5e-08 | 45.37 | WRKY transcription factor 2-like protein [Luffa aegyptiaca] | [more] |
XP_022142052.1 | 3.3e-08 | 44.64 | probable WRKY transcription factor 31 [Momordica charantia] | [more] |
XP_008364089.2 | 8.1e-07 | 42.42 | probable WRKY transcription factor 31 [Malus domestica] | [more] |
QDL95023.1 | 8.1e-07 | 42.42 | group IIb WRKY transcription factor [Malus domestica] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A498K0F0 | 3.2e-09 | 36.05 | WRKY domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_011739 PE=4 S... | [more] |
A0A1S6YJD5 | 7.2e-09 | 45.37 | WRKY transcription factor 2-like protein OS=Luffa aegyptiaca OX=3670 PE=2 SV=1 | [more] |
A0A6J1CLJ7 | 1.6e-08 | 44.64 | probable WRKY transcription factor 31 OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
A0A7S5AU12 | 3.9e-07 | 42.42 | Group IIb WRKY transcription factor OS=Malus domestica OX=3750 GN=WRKY39 PE=2 SV... | [more] |
V9MH48 | 3.9e-07 | 42.42 | WRKY transcription factor 42 OS=Malus hupehensis OX=106556 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |