Sed0027888 (gene) Chayote v1

Overview
NameSed0027888
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE
LocationLG06: 4346643 .. 4348407 (+)
RNA-Seq ExpressionSed0027888
SyntenySed0027888
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCCTTCAATTTCATTTTCTTTATAACATCCAATTTGCCAGAAATTTAAAAAACAAAAAAAAAAATGAAAAGAGAAGGCCGGCAACACGGCATGGTCCGAACCTACCGGATCCTCCCGTCACCGGTCAATAACGGGTTCATCAACGGCTACGATTCCCCGCCGACTGCTGGATTGTTCACCAAAGCCCCATCCGAACCTACCAACCACTCCAAGTTTACCGGTAAGTGCGGTCGCCCCCGGTGCTCCGGTTGCCGCATGCATCCGGTTTGCAAGGCTAAGAACAAAACCAAAGGTAAATTCTAATTTCTTTTTTATGATATAGTTTTTGTGAATATATTTTCAATTTGGTGCCCTAATTTTGGCTGGTTTTGATATAATCTCTCGGTGTGTTTGGGCCCATTTTTATAAACGGTCCAGTTGGTTATAATAACCCAACGATAGATGTTTCCCCACCGTTTATGATAAACGGTGGGTCAAACGTACTTGCTTATTTATCTAAACCTAAGGACATGTTTATCTAAAATTTACCAATATTACTTTTTGTTATTTAATCACTATTTTTCATAATCCATATTATTATAACTTCCCTTCAAACATTATTTATAATAATTCACCGTTTATCATAACCGTTTGCCTATCATAATCAAATTGGTGTTCCAAACATGCCCTATCATTTTGTGGGAAATTATTAGTCCAATTTTATAGTGTGTTTTTTTTCTGAAATAAAAATTAGACAAAATTTAGTTCTCAAAGTTAAAATTTCGTGGATCTACTAAACATTCAATTTTATAATTTTCTAATCATAGAGATAATTTTGTAACTTGTAAATTATATGGATTGAATTCTAAATTTCTTCCATTGATAATTGATAAGATTAAATTCTAAAGTTAAAATTAATATTTTTGTCTCATTATTTAGATTTTTCCTTTTCTTTTATCTCTAAACTTTTGAGATTTTTCTATCTCAAAGAAAGATCAAAATGGTTTATAAATTTGAAATTAATATTAATTGAATTTGGTTAACTCATATTAATATTAATAATTTTAATTAGGATAAAATCTTAACATAATTCTAAGACAAATTAAAAAATTCTGCTTATTGTTACTTCAACTTTCTGATAAATAAGAGATCAATTAGTTCAAGTTTCTTGCCCTCTACCATAATAATTGGGAATGAGATATTTAAATTTATATTTATTCATTAATCATATTAATATTGTCTGAGTTATTGCTCTAGTAACCACTATTTTGTAAGGCACTAAGAAATTAACATTTAAAAAAGAAAAAACAACACTATATATGTATAGGAAAAGAAAATAATGACACAACATAGTCACACGAGATTGGATGTTCAAAGTTTTCAAAATATAATAATTTTTGAATTTGAAATAAAATTGAAAATTATAGTATATTTAACCATTTGTTCATATGTTCTAACAAAAGGCACACACAAGCTTCGATCGGGCGATGTCAATGTCAATTGTCGACTAGTAAGTTGGCGAGTTGTGGATTCGAACCCGTTGCTCGGGTTGAATCTATTCGACATGTCGGCTTTGGGGATCGTGGATCACCTGTGGGAAGACTATGGGGATGAACATGATGATAACCATTGTGATTTGGAAGATAATTTGGAGATCAAGAATCTTGAAGGAAATGGTGTTCAATCAAGTGGTGATGATGATATGGATTTCTGCCATGTGGAACTTGTTATGGACCCTGCTGTAGAGGATGACCAAGAATGGTGCTTAGTGGGTGAAATGTAA

mRNA sequence

TCATCCTTCAATTTCATTTTCTTTATAACATCCAATTTGCCAGAAATTTAAAAAACAAAAAAAAAAATGAAAAGAGAAGGCCGGCAACACGGCATGGTCCGAACCTACCGGATCCTCCCGTCACCGGTCAATAACGGGTTCATCAACGGCTACGATTCCCCGCCGACTGCTGGATTGTTCACCAAAGCCCCATCCGAACCTACCAACCACTCCAAGTTTACCGGTAAGTGCGGTCGCCCCCGGTGCTCCGGTTGCCGCATGCATCCGGTTTGCAAGGCTAAGAACAAAACCAAAGGCACACACAAGCTTCGATCGGGCGATGTCAATGTCAATTGTCGACTAGTAAGTTGGCGAGTTGTGGATTCGAACCCGTTGCTCGGGTTGAATCTATTCGACATGTCGGCTTTGGGGATCGTGGATCACCTGTGGGAAGACTATGGGGATGAACATGATGATAACCATTGTGATTTGGAAGATAATTTGGAGATCAAGAATCTTGAAGGAAATGGTGTTCAATCAAGTGGTGATGATGATATGGATTTCTGCCATGTGGAACTTGTTATGGACCCTGCTGTAGAGGATGACCAAGAATGGTGCTTAGTGGGTGAAATGTAA

Coding sequence (CDS)

ATGAAAAGAGAAGGCCGGCAACACGGCATGGTCCGAACCTACCGGATCCTCCCGTCACCGGTCAATAACGGGTTCATCAACGGCTACGATTCCCCGCCGACTGCTGGATTGTTCACCAAAGCCCCATCCGAACCTACCAACCACTCCAAGTTTACCGGTAAGTGCGGTCGCCCCCGGTGCTCCGGTTGCCGCATGCATCCGGTTTGCAAGGCTAAGAACAAAACCAAAGGCACACACAAGCTTCGATCGGGCGATGTCAATGTCAATTGTCGACTAGTAAGTTGGCGAGTTGTGGATTCGAACCCGTTGCTCGGGTTGAATCTATTCGACATGTCGGCTTTGGGGATCGTGGATCACCTGTGGGAAGACTATGGGGATGAACATGATGATAACCATTGTGATTTGGAAGATAATTTGGAGATCAAGAATCTTGAAGGAAATGGTGTTCAATCAAGTGGTGATGATGATATGGATTTCTGCCATGTGGAACTTGTTATGGACCCTGCTGTAGAGGATGACCAAGAATGGTGCTTAGTGGGTGAAATGTAA

Protein sequence

MKREGRQHGMVRTYRILPSPVNNGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGIVDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEWCLVGEM
Homology
BLAST of Sed0027888 vs. NCBI nr
Match: XP_030956122.1 (uncharacterized protein LOC115978242 [Quercus lobata] >XP_030956124.1 uncharacterized protein LOC115978243 [Quercus lobata])

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-48
Identity = 110/208 (52.88%), Postives = 130/208 (62.50%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILPS +N       +N YDSP TAGLFTK PS+PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTYRILPSSINPRPETRVVNKYDSPLTAGLFTKVPSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
            P C+GC  HP CK+KNKTKGT KL+S DV  N RL+SWRV+D  P  GLN    SA GI
Sbjct: 61  TPGCTGCHDHPACKSKNKTKGTRKLKSHDVVSNSRLISWRVMDRKP--GLNFSGFSATGI 120

Query: 121 VDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGD 180
           +DHL+ D+ ++ DD                      N+ D +  +EIK  +      + D
Sbjct: 121 LDHLYNDHANDDDDDDEEVYSDINEYDHVYYGYGSSNNGDNKAEIEIKEDDDEKSDGNDD 180

Query: 181 DDMDFCHVELVMDPAVEDDQEWCLVGEM 183
           D M FC V  V+D A E D+ WCLV EM
Sbjct: 181 DKMSFCDVGFVLDQA-EGDEGWCLVEEM 205

BLAST of Sed0027888 vs. NCBI nr
Match: KAF3957464.1 (hypothetical protein CMV_017528 [Castanea mollissima])

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-47
Identity = 108/208 (51.92%), Postives = 132/208 (63.46%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           M+REGRQHGMVRTY ILPS +N       +N YDSPPTAGLFTK PS+PTNHSKFTGKCG
Sbjct: 1   MRREGRQHGMVRTYEILPSSINPKPETRVVNKYDSPPTAGLFTKVPSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
            P C+GC  HP  K+KNK KGTHKL+S DV  N RL+SWRV+D  P  GLN    SA GI
Sbjct: 61  TPGCTGCHDHPARKSKNKIKGTHKLKSHDVVSNSRLISWRVMDRKP--GLNFSGFSATGI 120

Query: 121 VDHLWEDYGDEHDDN----HCDLEDN------------------LEIKNLEGNGVQSSGD 180
           +DHL+ D+ +++DD+    + D+ +N                  +EIK  +      + D
Sbjct: 121 LDHLYNDHINDNDDDDEEVYSDINENDHVYYGYGSSNNGDNKAEIEIKEDDDEKGDGNDD 180

Query: 181 DDMDFCHVELVMDPAVEDDQEWCLVGEM 183
           D M FC V  V+D A E D+ WCLV EM
Sbjct: 181 DKMSFCDVGFVLDQA-EGDEGWCLVEEM 205

BLAST of Sed0027888 vs. NCBI nr
Match: KAF3444518.1 (hypothetical protein FNV43_RR14210 [Rhamnella rubrinervis])

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-46
Identity = 107/212 (50.47%), Postives = 130/212 (61.32%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTY ILPSP+N      F+  +DSPPTAGLFTK  S+PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTYHILPSPLNPRPSTRFVIDFDSPPTAGLFTKVSSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           RPRC+GC MHP CK+K+KTKGT K++S DV  N RLV+WRVV+     GLN    SA GI
Sbjct: 61  RPRCTGCHMHPTCKSKDKTKGTQKVKSNDVVSNHRLVTWRVVEGQQ--GLNFARYSATGI 120

Query: 121 VDHL------------------WEDYGDEHDDNHCD-------LEDNLEIKNLEGNGVQS 180
           ++ L                    DY   + D   D       ++   +I N +G G   
Sbjct: 121 LEQLSSCGVDDDDDETNGYDRDVNDYDRPYGDGDVDQVVGFQRIKTKTQILNDDGKGNGE 180

Query: 181 SGDDD-MDFCHVELVMDPAVEDDQEWCLVGEM 183
             DDD M FC+V   +D   E+D++WCLVGEM
Sbjct: 181 DDDDDAMSFCNVAFALDQVEEEDEDWCLVGEM 210

BLAST of Sed0027888 vs. NCBI nr
Match: XP_041006436.1 (uncharacterized protein LOC121251158 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-46
Identity = 110/201 (54.73%), Postives = 130/201 (64.68%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILPS VN      FIN +DSPPTAGLFTK PS+PTNHSKFTGKC 
Sbjct: 1   MKREGRQHGMVRTYRILPSSVNPRPETRFINKFDSPPTAGLFTKVPSKPTNHSKFTGKCA 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
            PRC+GC +HP  K+K K KG  KL+S DV +N R VSWRVVD  P  GLN   +SA  +
Sbjct: 61  TPRCTGCHVHPTSKSKLKAKGAQKLKSNDVMINSRFVSWRVVDGQP--GLNFSSISATDL 120

Query: 121 VDHLWEDY---------GDEHDDNHCDL------EDNLEIKNLEGNGVQSSGDDD-MDFC 180
           +DHL  DY          DEH+++  DL       DN+E+     N  +   DDD M FC
Sbjct: 121 MDHLSSDYMNDDEVSDLDDEHNES-VDLTSTNRGNDNVEVDTKNNNEEKHVIDDDEMSFC 180

Query: 181 HVELVMDPAVEDDQEWCLVGE 182
            V L +D  VE+++ WCLV E
Sbjct: 181 DVGLRLD-RVEEEEGWCLVEE 197

BLAST of Sed0027888 vs. NCBI nr
Match: XP_002526938.1 (uncharacterized protein LOC8260322 [Ricinus communis] >EEF35425.1 hypothetical protein RCOM_0530890 [Ricinus communis])

HSP 1 Score: 194.9 bits (494), Expect = 6.1e-46
Identity = 104/186 (55.91%), Postives = 125/186 (67.20%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRT RILPSP N    + FIN +DSPPTAGLFTK    PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           +PRC+GC MHP CK+K+KTKGT KL+S DV  N RL+SWRVVD  P  GLN    SA  I
Sbjct: 61  KPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVVDGKP--GLNFSGFSASRI 120

Query: 121 VDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEW 180
           +DH+ +D     DD   D E+ +     +G+       DD  +C V  ++D  VE D++W
Sbjct: 121 LDHMDDDERYVDDD---DYEETIAANVDDGDDDDIDDGDDTSYCDVGFLLD-QVEGDEDW 180

Query: 181 CLVGEM 183
           CLV E+
Sbjct: 181 CLVAEL 180

BLAST of Sed0027888 vs. ExPASy TrEMBL
Match: A0A7N2KZQ0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.2e-49
Identity = 110/208 (52.88%), Postives = 130/208 (62.50%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILPS +N       +N YDSP TAGLFTK PS+PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTYRILPSSINPRPETRVVNKYDSPLTAGLFTKVPSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
            P C+GC  HP CK+KNKTKGT KL+S DV  N RL+SWRV+D  P  GLN    SA GI
Sbjct: 61  TPGCTGCHDHPACKSKNKTKGTRKLKSHDVVSNSRLISWRVMDRKP--GLNFSGFSATGI 120

Query: 121 VDHLWEDYGDEHDD----------------------NHCDLEDNLEIKNLEGNGVQSSGD 180
           +DHL+ D+ ++ DD                      N+ D +  +EIK  +      + D
Sbjct: 121 LDHLYNDHANDDDDDDEEVYSDINEYDHVYYGYGSSNNGDNKAEIEIKEDDDEKSDGNDD 180

Query: 181 DDMDFCHVELVMDPAVEDDQEWCLVGEM 183
           D M FC V  V+D A E D+ WCLV EM
Sbjct: 181 DKMSFCDVGFVLDQA-EGDEGWCLVEEM 205

BLAST of Sed0027888 vs. ExPASy TrEMBL
Match: B9SLR9 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0530890 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.9e-46
Identity = 104/186 (55.91%), Postives = 125/186 (67.20%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRT RILPSP N    + FIN +DSPPTAGLFTK    PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTCRILPSPWNPRPDSRFINRFDSPPTAGLFTKVLPRPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           +PRC+GC MHP CK+K+KTKGT KL+S DV  N RL+SWRVVD  P  GLN    SA  I
Sbjct: 61  KPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVVDGKP--GLNFSGFSASRI 120

Query: 121 VDHLWEDYGDEHDDNHCDLEDNLEIKNLEGNGVQSSGDDDMDFCHVELVMDPAVEDDQEW 180
           +DH+ +D     DD   D E+ +     +G+       DD  +C V  ++D  VE D++W
Sbjct: 121 LDHMDDDERYVDDD---DYEETIAANVDDGDDDDIDDGDDTSYCDVGFLLD-QVEGDEDW 180

Query: 181 CLVGEM 183
           CLV E+
Sbjct: 181 CLVAEL 180

BLAST of Sed0027888 vs. ExPASy TrEMBL
Match: W9S8I3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017676 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.0e-46
Identity = 109/205 (53.17%), Postives = 134/205 (65.37%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILP+P+N      F+N +DSP TAGLFT+ PS+PTNHSKFTGKC 
Sbjct: 1   MKREGRQHGMVRTYRILPTPLNPKPETQFVNRFDSPATAGLFTRVPSKPTNHSKFTGKCS 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           +PRC+GC +HP CKAK+KTKG  KL+S DV  N +L++WRVVDS P  GLN   +SA  I
Sbjct: 61  QPRCNGCHLHPTCKAKDKTKGNQKLKSRDVVSNYKLLTWRVVDSRP--GLNFSGVSATRI 120

Query: 121 VDHLWEDYGDEHD---------DNHCD-------LEDNLEIKNLEGNGVQ-SSGDDD--M 180
           VDH+   +  +HD         D   D       ++  +EI N + +  Q   GDDD  M
Sbjct: 121 VDHMSSYHLHDHDLDGEEEEVGDYVKDPTVGFNPIQSGVEISNADRDDDQVDHGDDDEEM 180

Query: 181 DFCHVELVMDPAVEDDQEWCLVGEM 183
            FC V  V++  VE D  WCLVGEM
Sbjct: 181 SFCDVGFVLE-QVEGDDGWCLVGEM 202

BLAST of Sed0027888 vs. ExPASy TrEMBL
Match: A0A067LND4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10195 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.5e-46
Identity = 107/205 (52.20%), Postives = 131/205 (63.90%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILPSP N    + FIN ++SPPTAG FTK  S PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTYRILPSPWNPKPESRFINTFNSPPTAGFFTKVQSRPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           +PRC+ C M+P CK+K+KTKG HKL+S D   NCRL++WRVVD  P  GLN    SA  I
Sbjct: 61  KPRCNDCHMNPCCKSKDKTKGNHKLKSHDFASNCRLMTWRVVDGRP--GLNFSGFSASEI 120

Query: 121 VDHLWEDYGDEHDDNHCD---------LEDNLEIKNL---------EGNGVQSSG--DDD 180
           ++ L  D  D++ D+  D         LED+ EI+           + NG+   G  DD+
Sbjct: 121 LNRLAIDDNDDYADDGDDEIDGYYGNYLEDSNEIQENACVDNNNKDDDNGLVGEGDYDDN 180

Query: 181 MDFCHVELVMDPAVEDDQEWCLVGE 182
           M FC V  V+D    +D+ WCLV E
Sbjct: 181 MSFCDVGFVLDQVEGEDEGWCLVEE 203

BLAST of Sed0027888 vs. ExPASy TrEMBL
Match: A0A2N9F7S7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10696 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 111/211 (52.61%), Postives = 130/211 (61.61%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREGRQHGMVRTYRILPSP+N       IN ++ P TAGLFTK PS+PTNHSKFTGKCG
Sbjct: 1   MKREGRQHGMVRTYRILPSPINPRPETRVINKFNLPLTAGLFTKVPSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
              C+GC +HP CK+KNKTKGTHKL+S DV  N RL+SWRV+D  P  GLNL   SA  I
Sbjct: 61  TSECTGCHIHPACKSKNKTKGTHKLKSHDVVSNSRLISWRVMDRQP--GLNLSGSSATDI 120

Query: 121 VDHLWEDYGDEHDD------------------------NHCDLEDNLEIKNLEGNGVQSS 180
           +  L+ D+ +  DD                        N  D E  +EIK  E +  +  
Sbjct: 121 LAQLYSDHINNDDDEEEEEEVYSAINEYDHVYCGYGSPNKGDNETGIEIK--EDDDEKID 180

Query: 181 GDDD-MDFCHVELVMDPAVEDDQEWCLVGEM 183
           GDDD M FC V  V+D  VE D+ WCLV EM
Sbjct: 181 GDDDKMSFCDVGFVLD-QVEGDEGWCLVEEM 206

BLAST of Sed0027888 vs. TAIR 10
Match: AT5G40690.1 (CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39
Identity = 96/210 (45.71%), Postives = 125/210 (59.52%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN----NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCG 60
           MKREG+QHGMVRTYRILP  +N    +  +N   S PTAGLFTK  S+PTNHSKFTGKCG
Sbjct: 1   MKREGKQHGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKCG 60

Query: 61  RPRCSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDSNPLLGLNLFDMSALGI 120
           + RC  C MHPV K+K KTKG+ K+R+ DV    ++++W+V    P  GL L   SA GI
Sbjct: 61  QARCLDCHMHPVTKSKAKTKGSSKVRTNDVTY--KMLTWQVAAGGPRPGLKLSGFSATGI 120

Query: 121 VDHLWEDYGDEHD---DNHCDLEDNL-----EIKNLEGNG------VQSSGDDD------ 180
           +D + +DYG +HD   D   + E+N      E+ N++ +        + S DDD      
Sbjct: 121 LDLMSDDYGYDHDYDYDEENEEEENRGSVVEEVVNIQSSDDGGETEEEGSNDDDDDTDDD 180

Query: 181 --MDFCHV--ELVMDPAVEDDQEWCLVGEM 183
             M FC V   ++MD   E D+ W LV EM
Sbjct: 181 GRMSFCDVGMMMMMDHVEEYDEGWYLVEEM 208

BLAST of Sed0027888 vs. TAIR 10
Match: AT2G41730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 52/130 (40.00%), Postives = 66/130 (50.77%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVN-NGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPR 60
           MK EGR  G+VRT  I P   N     N  DSPP  G FTK PS+ TNHS  TG+  R +
Sbjct: 1   MKSEGRHQGIVRTGMIHPRGFNPRPTSNRLDSPPAFGDFTKVPSKTTNHSNTTGESERSK 60

Query: 61  CSGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDS-NPLLGLNLFDMSALGIVD 120
            S C + P  K+ +K+KG  KL+           SW   D  + L+G +    SA  I+D
Sbjct: 61  YSHCHVSPAIKSGHKSKGRRKLQP---------TSWWSEDKLDRLIGSD--SSSAKDILD 119

Query: 121 HLWEDYGDEH 129
            L  +  DEH
Sbjct: 121 TLCGEDHDEH 119

BLAST of Sed0027888 vs. TAIR 10
Match: AT5G24640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.6e-12
Identity = 48/129 (37.21%), Postives = 63/129 (48.84%), Query Frame = 0

Query: 1   MKREGRQHGMVRTYRILPSPVNNGFINGYDSPPTAGLFTKAPSEPTNHSKFTGKCGRPRC 60
           MK EGR  G+VRT  I P   N    N  DSPP  G FTK   + TNHS   G+  R + 
Sbjct: 1   MKSEGRHQGVVRTGMIHPRGFNPRHTNRLDSPPVFGDFTKMQPKTTNHSNIIGESERSKY 60

Query: 61  SGCRMHPVCKAKNKTKGTHKLRSGDVNVNCRLVSWRVVDS-NPLLGLNLFDMSALGIVDH 120
           S C + P  K+ +K+KG  KL+           SW   D  + L+G +    SA  I+D 
Sbjct: 61  SNCHVSPAIKSGHKSKGRRKLQP---------TSWWSEDKLDRLIGSD--SSSAKDILDM 118

Query: 121 LWEDYGDEH 129
           L  +  DE+
Sbjct: 121 LCSEDHDEY 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030956122.11.7e-4852.88uncharacterized protein LOC115978242 [Quercus lobata] >XP_030956124.1 uncharacte... [more]
KAF3957464.12.5e-4751.92hypothetical protein CMV_017528 [Castanea mollissima][more]
KAF3444518.12.1e-4650.47hypothetical protein FNV43_RR14210 [Rhamnella rubrinervis][more]
XP_041006436.13.5e-4654.73uncharacterized protein LOC121251158 [Juglans microcarpa x Juglans regia][more]
XP_002526938.16.1e-4655.91uncharacterized protein LOC8260322 [Ricinus communis] >EEF35425.1 hypothetical p... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7N2KZQ08.2e-4952.88Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
B9SLR92.9e-4655.91Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0530890 PE=4 SV=1[more]
W9S8I35.0e-4653.17Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017676 PE=4 SV=1[more]
A0A067LND46.5e-4652.20Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10195 PE=4 SV=1[more]
A0A2N9F7S71.9e-4552.61Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10696 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40690.12.6e-3945.71CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247)... [more]
AT2G41730.14.2e-1340.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G24640.13.6e-1237.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34278PROTEIN THI031, PUTATIVE-RELATEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR34278:SF1PROTEIN THI031, PUTATIVE-RELATEDcoord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027888.1Sed0027888.1mRNA