Sed0026762 (gene) Chayote v1

Overview


Name	Sed0026762
Type	gene
Organism	Sechium edule (Chayote v1)
Description	thioredoxin H2-like
Location	LG06: 5360132 .. 5362551 (-)
RNA-Seq Expression	Sed0026762
Synteny	Sed0026762

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACACAGTACTCACCATTTCCATTTCTAGAGAGAGAAAACCTAGAGAGAGAGACAGAGAGAAAATGGGAGTTCTTCTCTCTCGGGTCGGGTCTCTTCTTTCGAACTGGTTCGGGCCGTCAACGGCGAGCGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTTGGCCTTTCACTCATCGGCCCGATGGCAACTCCACTTCAATTCCGTCAAGGAATCCTCCAAGCTCGTAACACTCACTCCACTTTTTACCCTTTTTTGCAATTGCAGCGAATTTTTCTAGGGTTACTGTTTTCAATTCCATTGGTGATCTGATTTATTTGTTCCGTTTTTCGTTTGATTTGTTGGATTTTGGGAGAGTAGACGGTGATTGATTTCTCGGCGACTTGGTGTGGACCCTGTAGGCTTATGGAGCCGTCGTTCAACGCCATGGCTGCCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGTCTGTATGTTTTTTTTAATCCTTCTGATTTTATGTACTTTTGTCTTTGTTTCTGATTCTTTAACTGTAATTTTAGCTGATTTTACATTTGTGTGGTTGCTGTGATGGGTTTTTCAGTTTAGTCTCAGCCATTTGAGTAATGGTAAATCACCAATCAATCTAATAGTTTAGAAATCAATATTGAGAATACCCATCAAATAGAAATCGATGTTAATTAGGGATGAAATGGACTTGACAGGGGCTCGAATACATGACTTCCCGCTCTGATAGCATGTTCAATTATGTTAAATCACTAATCAACTTAAAAGCTTAAACTAATGGGTTTAAGTAAATTTAATTATATAATGTATATTTATGTGGCTCAATGTTGAAATGAGCTGAAAGGAAGCAAGAATTTAGCGACTTAGCATAAGTTTAGAAGAGGAATTAGCGTAAGTTTGGAGACCACTTACCTAGGATAGATCACAATTTTTACCAATCGTGAGTTTTCTTGACTTCCAAATGTTGTAGGGATTAGTGTTATGTTCTGTGAGAATAGTCAAAGTACTCATAAGTTGGCCTGAACACTCACGGATATAAAAAAAGAAGAAAAGTCACAATTTCTGCCAGTTTCTTAGAAACTTGAAGCAAAAATAAGAAACTTTCTTCTGAGTGGGTATAATATCATTTAAGTTTATCATAATCCATTAATCATATAATATTGACTTGTGGAAATTGTATAATTGAAAAACATTGCTATCTTGGGACAGTTATGCTCGTAACTCAAACTTGTTTAGACATTATATTCTCAACTAAAAGGTTAGACATTTAATTTCCACCCGAAAACGTTATTGAATTCAAGAATAATGTTAAAACATAAGTAACTAAATTGAAGCATTTTTGTCACGGACTAAAGTGAAAAAATGTCTCAAGCATATGCATATGTTTAACCTGAATCTGATTGCAAGAATGACATGAATGTTTGTGGAATCAGGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTGTTGGATACGGTAGTCGGAGCTCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCATCGATCAGCTTCTGGTTGAACTTATATCCTAAAACCTCCAACAATAAGGTCTCTCTTTGTCACTCTTCTTCTTTTTATGTTAACATATGAAATTTATCTATATTCTAACTTGGTCAGTTACTTGAATTTTCATTTGTTGTATAAACTCTATCCTTGTTTATCTTTAGATTGTTTATGGCCAATCTATCTATCTTTTCTGTAAGATATGCCTATTGTTTGCCTTTATTTGGTGTAATCATTCTTTCATTTCTTTTCAAATCCTTTATCTGCAGAGTGCTTGAAAATCCAACAGTTTTGATGTGGTTTTCTTGCAAATAGCTCAAGTTTTGAACTTGAAGTGGAATTTTGATATTCATTTGAAGCTAATCGTGTAGTGTAATGTCTTCAAGGGGTGGCATAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCTCTCAAGGTCCCAGGTTCGAGACTCACCTATGACATTACTTCTTCAATGTCTCCGGTGCCTGGCCTAGGGACGGACATGGTTATCTTGTTTACATAAAAATCATGTAGTGGAATACTTGGATAAATTTCCTATGATCTTGGATAATTTTTTTATTCCAAGTTTCTTACATAATAATCTTGGGGCCTTTCTCTACGGAAAGGAAAATTCTTTAAGTAAGTGTGACAGGAAAGGGTTGAAATCTTTTCCTTCTAAAGTGTGACAGGAAAATTCTTTAATTGTGATAGAAAGGGGCTAAATCTCTTCCTTGCCTGGTACTAACAATATATCTTTGTGCTCTAATTATACTTATTATCCTATCTTAATCCAATAATTTTGATTATTTTAGTATTCATCATTTATTACAATTTAC

mRNA sequence

CGACACAGTACTCACCATTTCCATTTCTAGAGAGAGAAAACCTAGAGAGAGAGACAGAGAGAAAATGGGAGTTCTTCTCTCTCGGGTCGGGTCTCTTCTTTCGAACTGGTTCGGGCCGTCAACGGCGAGCGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTTGGCCTTTCACTCATCGGCCCGATGGCAACTCCACTTCAATTCCGTCAAGGAATCCTCCAAGCTCACGGTGATTGATTTCTCGGCGACTTGGTGTGGACCCTGTAGGCTTATGGAGCCGTCGTTCAACGCCATGGCTGCCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGTCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTGTTGGATACGGTAGTCGGAGCTCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCATCGATCAGCTTCTGGTTGAACTTATATCCTAAAACCTCCAACAATAAGGTCTCTCTTTGTCACTCTTCTTCTTTTTATGTTAACATATGAAATTTATCTATATTCTAACTTGGTCAGTTACTTGAATTTTCATTTGTTGTATAAACTCTATCCTTGTTTATCTTTAGATTGTTTATGGCCAATCTATCTATCTTTTCTGTAAGATATGCCTATTGTTTGCCTTTATTTGGTGTAATCATTCTTTCATTTCTTTTCAAATCCTTTATCTGCAGAGTGCTTGAAAATCCAACAGTTTTGATGTGGTTTTCTTGCAAATAGCTCAAGTTTTGAACTTGAAGTGGAATTTTGATATTCATTTGAAGCTAATCGTGTAGTGTAATGTCTTCAAGGGGTGGCATAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCTCTCAAGGTCCCAGGTTCGAGACTCACCTATGACATTACTTCTTCAATGTCTCCGGTGCCTGGCCTAGGGACGGACATGGTTATCTTGTTTACATAAAAATCATGTAGTGGAATACTTGGATAAATTTCCTATGATCTTGGATAATTTTTTTATTCCAAGTTTCTTACATAATAATCTTGGGGCCTTTCTCTACGGAAAGGAAAATTCTTTAAGTAAGTGTGACAGGAAAGGGTTGAAATCTTTTCCTTCTAAAGTGTGACAGGAAAATTCTTTAATTGTGATAGAAAGGGGCTAAATCTCTTCCTTGCCTGGTACTAACAATATATCTTTGTGCTCTAATTATACTTATTATCCTATCTTAATCCAATAATTTTGATTATTTTAGTATTCATCATTTATTACAATTTAC

Coding sequence (CDS)

ATGGGAGTTCTTCTCTCTCGGGTCGGGTCTCTTCTTTCGAACTGGTTCGGGCCGTCAACGGCGAGCGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTTGGCCTTTCACTCATCGGCCCGATGGCAACTCCACTTCAATTCCGTCAAGGAATCCTCCAAGCTCACGGTGATTGATTTCTCGGCGACTTGGTGTGGACCCTGTAGGCTTATGGAGCCGTCGTTCAACGCCATGGCTGCCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGTCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTGAGGAGAGGGAAAGTGTTGGATACGGTAGTCGGAGCTCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCATCGATCAGCTTCTGGTTGA

Protein sequence

MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASG

Homology

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BLAST of Sed0026762 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 7.0e-66
Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLSR+G LLSNWFGP TASAEAASSEPSSVL+FHSSARWQLH+NS +ESSKL VIDF
Sbjct: 1   MGVLLSRIGVLLSNWFGPPTASAEAASSEPSSVLSFHSSARWQLHYNSAQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDVEFVKIDVDELSDVAQ FGVQAMPTFVLLR+GKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQHFGVQAMPTFVLLRKGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Sed0026762 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64
Identity = 127/142 (89.44%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVL S +G+L+S WFGPSTASAEAASSEPSSV +FHSSARW+LHF+SV+ESSKL VIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Sed0026762 vs. NCBI nr
Match: XP_022934421.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cucurbita pepo subsp. pepo] >KAG7017722.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 126/138 (91.30%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLS++G+LLSNWFGPSTA AE ASSEPSSVL+FHSSARWQLHFNS KESSKL VIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0026762 vs. NCBI nr
Match: XP_022971509.1 (thioredoxin H2-like [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 5.0e-64
Identity = 127/142 (89.44%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVL S +G+LLS WFGPS ASAEAASSEPSSV +FHSSARW+LHF+SV+ESSKL VIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Sed0026762 vs. NCBI nr
Match: KAG6580981.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.8 bits (647), Expect = 8.6e-64
Identity = 125/138 (90.58%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLS++G+LLSNWFGPSTA AE  SSEPSSVL+FHSSARWQLHFNS KESSKL VIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDVSSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-41
Identity = 81/133 (60.90%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 8   VGSLLSNWFGP-STASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCG 67
           +G  LS  FG    A+A    SEPS VL F SSARWQLHFN +KES+KL V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-29
Identity = 65/126 (51.59%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 19  STASAEAASSE---PSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSF 78
           ST+  + A+ E    S+V+A HS A+W   +++ K ++KL VIDFSA+WCGPC++MEP F
Sbjct: 6   STSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65

Query: 79  NAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQ 138
             MA ++TDV F+K+DVDEL++VA+ + V+AMPTFVL R G+ +  +VGA K+ELEK I 
Sbjct: 66  KEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTIN 125

Query: 139 KHRSAS 142
             RS+S
Sbjct: 126 TLRSSS 131

[Close]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-29
Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 8   VGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKES-SKLTVIDFSATWCG 67
           +GS  S  F P  A+ +   S    V+A HS+A W   + + K + +KL VIDFSATWCG
Sbjct: 1   MGSFFSTMFTPPPAADDGGDSR---VVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR +EP+F  MA ++ D  F KIDVDELS+VA+ + V+AMPTFVL++ GK +  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKIQKHRSAS 142
           K+ELE+K+    S+S
Sbjct: 121 KDELERKVNMFISSS 132

[Close]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-26
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 27  SSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKY-TDV 86
           ++E   V+  H++  W +  +  KES+KL VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-26
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 27  SSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKYTDVE 86
           +SE   V+A H+   W        ES  L V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0026762 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 127/142 (89.44%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVL S +G+L+S WFGPSTASAEAASSEPSSV +FHSSARW+LHF+SV+ESSKL VIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Sed0026762 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 126/138 (91.30%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLS++G+LLSNWFGPSTA AE ASSEPSSVL+FHSSARWQLHFNS KESSKL VIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0026762 vs. ExPASy TrEMBL
Match: A0A6J1I8S1 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.4e-64
Identity = 127/142 (89.44%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVL S +G+LLS WFGPS ASAEAASSEPSSV +FHSSARW+LHF+SV+ESSKL VIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+ YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Sed0026762 vs. ExPASy TrEMBL
Match: A0A6J1J3L5 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.1e-64
Identity = 125/138 (90.58%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLS++G+LLSNW GPSTA AE ASSEPSSVL+FHSSARWQLHFNS KESSKL VIDF
Sbjct: 1   MGVLLSKIGALLSNWIGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMA+KYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Sed0026762 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGVLLSRVGSLLSNWFGPSTASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDF 60
           MGVLLSR+G+LLSNWFGP TA+AEAASSEPSSV +FHSSARWQLHFNSV+E+SKL VIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMA+KYTDVEF KIDVDEL+DVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKI+KHRS SG
Sbjct: 121 TVVGARKEELEKKIEKHRSVSG 142

[Close]

BLAST of Sed0026762 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 81/133 (60.90%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 8   VGSLLSNWFGP-STASAEAASSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCG 67
           +G  LS  FG    A+A    SEPS VL F SSARWQLHFN +KES+KL V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMAAKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Sed0026762 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 27  SSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKY-TDV 86
           ++E   V+  H++  W +  +  KES+KL VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Sed0026762 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-27
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 27  SSEPSSVLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKYTDVE 86
           +SE   V+A H+   W        ES  L V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Sed0026762 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 33  VLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKYTDVEFVKIDV 92
           V+A H+   W        ES KL VIDF+A+WC PCR + P F  MA K+T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           DEL  VAQ+F V+AMPTFV ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Sed0026762 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 117.5 bits (293), Expect = 8.9e-27
Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 33  VLAFHSSARWQLHFNSVKESSKLTVIDFSATWCGPCRLMEPSFNAMAAKYTDVEFVKIDV 92
           V+A H+   W     +  ES KL VIDF+ATWC PCR + P F  +A K+ DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS 140
           DEL+ VA++F VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH++
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

The following BLAST results are available for this feature:

BLAST of Sed0026762 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903635.1	7.0e-66	91.55	thioredoxin H2 [Benincasa hispida]	[more]
XP_022928736.1	2.3e-64	89.44	thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like iso...	[more]
XP_022934421.1	2.9e-64	91.30	thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cu...	[more]
XP_022971509.1	5.0e-64	89.44	thioredoxin H2-like [Cucurbita maxima]	[more]
KAG6580981.1	8.6e-64	90.58	Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0026762 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	1.6e-41	60.90	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q6Z4I3	3.2e-29	51.59	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q851R5	4.2e-29	49.63	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 S...	[more]
Q39239	2.5e-26	49.11	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
P29448	3.3e-26	48.65	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]

BLAST of Sed0026762 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL53	1.1e-64	89.44	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1	[more]
A0A6J1F1R9	1.4e-64	91.30	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1	[more]
A0A6J1I8S1	2.4e-64	89.44	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1	[more]
A0A6J1J3L5	7.1e-64	90.58	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1	[more]
A0A5D3DQ11	1.6e-63	86.62	Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00828...	[more]

BLAST of Sed0026762 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	1.2e-42	60.90	thioredoxin 2	[more]
AT1G19730.1	1.8e-27	49.11	Thioredoxin superfamily protein	[more]
AT3G51030.1	2.3e-27	48.65	thioredoxin H-type 1	[more]
AT1G45145.1	4.0e-27	52.38	thioredoxin H-type 5	[more]
AT5G42980.1	8.9e-27	49.53	thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 56..64 score: 45.0 coord: 64..73 score: 58.06 coord: 103..114 score: 36.11
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 17..140 e-value: 2.1E-39 score: 136.3
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..140
None	No IPR available	PANTHER	PTHR10438:SF413	THIOREDOXIN H2	coord: 9..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 45..135 e-value: 1.15991E-39 score: 126.904
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 47..136 e-value: 7.6E-28 score: 96.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 23..139 score: 14.758735
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 57..75
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 47..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026762.1	Sed0026762.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
molecular_function	GO:0015035	protein-disulfide reductase activity