Sed0025823 (gene) Chayote v1

Overview
NameSed0025823
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG03: 15871031 .. 15874132 (+)
RNA-Seq ExpressionSed0025823
SyntenySed0025823
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAATGTTTGTCAAAAACATCCAGCAACAAGCGCGGTGGTCGGGAGTTGAGAGGTCGACAAGGCGAGGAAGATGAGAAGCAGCAGAATGAGAAGGGGCACGAAGAGGACCGCCATAGGCGGTGGTGGCAGCGGCGGAAGAAGCAGAGGCAGCACAAGGAGGGACAGTGCCCAAAGAAACAACAAAGCCATGGTGGAGTAGTAGACCATCTAAACCAAACCCTACTTTGGCTTGTTTTAGCTTTCCTCCATATGTTTATGAATATCGGTTGTCTGAGCTGTGGCGGCGCCGCCGTTGGAAGGCCGGAGTTGGTGGTCGTGGTGGCGGCTAAGGGCGGAGGAGGTGGATTTGTGGGGGATGTGAGAGATAATGGAAATGGTGAGTACAGACACAGGGTCTTATATATAATATGTAAAAGAGGGTTATCTATTGAAAGAGAAAAAAAGAAAAATTTAGTAATTTTTCTTTGAAGTGGAACGAGTACAGACTTTCTACCATTTGTGAATAATATTATGTTATATTTTTAATATATCATTTATCTTTGATTATCATCATCCTTTTATATAATTTTAATGTTTTTTTCATTTATATTATTAATGAGGCACATTATTATCTTCGTAAACAGTGAGAAATATATACTTGCAAACAAGCTAGTTAAATATTGAAGTTCTTATTTATTTTCTTTCTTTTTATTACTTTTAATATGCATTGTTCACTGGTGTTGAATTGATTTACAACCAAACAATAAAATTATTGCGTCACTCACCCATTCGGTAAGTATTATATTAGTTTTGATACATATTTAACCCTGAAAATAACAAAATATCTTATTGTTAACCCTCATTCTCAATGTTGGACAAAATTTATTTGATTAAGAACAAAACGTATATGTATATTTTAAAAAATTATTATTTTCTTAATTTATAAAACTTACGTATAAATAATAATAATAAAATTTATTTTATTTCAAACAAAATGTATAGTGATAAAAATTCGAAACATTATGACCCCATTTGACTACCATTTTGTTTTTAGTTTTTGGTTTTTGAAATTTAAGTCTACAATAATTATTTTACCATATATATATATATTTATTTATTTATTTCGATATCTACTTCTTACCTATATTTTTAGAAACTAAATCAAAATTTGAAAAAAAAAAAGCAGCTTTCAAAAGCTTGTTTTTGTTTTGTTGAGATATGCCTTGAATGTTGAATGCCCTGCGATTAGTAGTCGGAAGTCTCACTGCCCGGTCAGTGAGTGGGAGTGCAGGGGCAACACCCCCGTTGCGTAAATGTTTTTTGCAGTGTAACAAACGCATCCCACATTGCAGCAATGCAATATGCATTCGTTTAGCACATCCTGCTTTTGCACTCCGCAGTGTTAGTGCATCCTGCATCCACACTTCGTAGCGTGAGCACATCTCGCATTTCCGCATTCTATTGCGCAACTTTGATTTCTTGTTTACGCATTATGCAATAGAGTTTAATGATAATGCATTATGTAATCTATATTTCGCATTCCTTAATAAAATTATGCCCCCTCTCTGCCTGTGGATTAGCTAACACAACGTTAGTGAACCATGTAAATTTCTCTGTTGTTTTCTTCTACTTTTTACATTTTCTTTATCTTCGCATGAGTTATTGATTGCCGTTTTCATAACATGTTTTTTAAATTTGCTTAGCATCCACCTACTTTCTTAAAAAAAAAGATGAATATTATAGAAAACATGGAACACATGGTAAAAAATTTGTGTAAAAATAAGTTTAAATTTCAAAAACCAAAAACAAAAAAGAAAATAATTATCAAACGGGATCAATATAACTCTTATGGAAGTGAATAATGCTTTTGAGTTGGTTTGCAAAATAAGAACTATTTAATGATGTTTGTGGAACAACATTTTACTCTTATTTAATCTTTTATAATTTTTATAGTTCTTGTTCGGTCCTTATACACTTTCTATTTCTTTTCATCTCTTGAACTTGTCCCATACAATTTTTTTCGCTGATGTTTGGTGTTTACCTTTCAAATTTCTGTTACTTTTTCCTTTCGTTTTTCTCTCTTAAAATTCATAAAATATATTTTAGTTCAAATTACCAAAACTTAATATATGCATAGTTATATTGATATCTTATGCAACCTAATAATTAATAGGTTACATATTTGAAGATCTTTCTCCCACGGTACTCAAAAAAAAAAAAAAAAAAAAAAATCTTTCTCCCACGGTTAAATTAAAAAAATTATGCTTGTATTTTAGAAACTGCCAACAAAAGTAAAGTCCAATTAGCATGATACTTTTGACCGGAAATTCAGGAGTTTAAATTTACCATCCAAAAATGGTTAGAAATTAAAGAAAGAAAAAAAAACTTTCGATTTTGAAACCACTTACGGTTTTGTGAAAGCTTAGGACCTGAATTAGAAAGCTAAAATATGATTTAAACTTAATTGGCATATAAGCTGACTTAAAAATATAATATTTATTCATAAAAAAAAATTAAATTAATATAAACCAAAGTTGAAAATGGTAATTTGCTAAGATAGTCCATAGAAAAGTCAAAATGGTAGAGCAGCCACAAGATTATTGCATTTGTCCATTCAGCCCCCTTCCCTCTTTCTCCAACCTCCACTATCAATTATCCTTCTTTTTTAAGTAATAAGGAAAAAAAGATAATACAATCTAGGCAATTTCATTGGTTGAGTTTTGGCATTTGTCTTTTTTTTTTTTCTTTATTTAAGGGTGAAAGTTAGTTTAGGGTTGGTTTTATAATAATAATAATAATAGTTTTTAATGCATGTTTATTAGATTTTCTTTTGTGTTTGTAAGAATACTTTATTAACATTTAATTTTTTAGTTGAATCCAAATGTCTTTAACTAGAAAAGCTATGACAGAGTCCCTCTAAAAAAGATAATTAATTGACCAATTTTTTTAAATGAAAAATAAATGCGAAAGAAAAATCACTTAAAAATATGAAAAAGATATATTATTTTTTTAAATACTAAGAAAGGATTATTTTCAAATAAACTTAAATTTACATTTTTTTTTTCAGTCCATCAAGACCCGTGGGTGAAAACTTGGATGTTCGACTTAAAAAAATAA

mRNA sequence

ATGCAAAAATGTTTGTCAAAAACATCCAGCAACAAGCGCGGTGGTCGGGAGTTGAGAGGTCGACAAGGCGAGGAAGATGAGAAGCAGCAGAATGAGAAGGGGCACGAAGAGGACCGCCATAGGCGGTGGTGGCAGCGGCGGAAGAAGCAGAGGCAGCACAAGGAGGGACAGTGCCCAAAGAAACAACAAAGCCATGGTGGAGTAGTAGACCATCTAAACCAAACCCTACTTTGGCTTGTTTTAGCTTTCCTCCATATGTTTATGAATATCGGTTGTCTGAGCTGTGGCGGCGCCGCCGTTGGAAGGCCGGAGTTGGTGGTCGTGGTGGCGGCTAAGGGCGGAGGAGGTGGATTTGTGGGGGATGTGAGAGATAATGGAAATGTCCATCAAGACCCGTGGGTGAAAACTTGGATGTTCGACTTAAAAAAATAA

Coding sequence (CDS)

ATGCAAAAATGTTTGTCAAAAACATCCAGCAACAAGCGCGGTGGTCGGGAGTTGAGAGGTCGACAAGGCGAGGAAGATGAGAAGCAGCAGAATGAGAAGGGGCACGAAGAGGACCGCCATAGGCGGTGGTGGCAGCGGCGGAAGAAGCAGAGGCAGCACAAGGAGGGACAGTGCCCAAAGAAACAACAAAGCCATGGTGGAGTAGTAGACCATCTAAACCAAACCCTACTTTGGCTTGTTTTAGCTTTCCTCCATATGTTTATGAATATCGGTTGTCTGAGCTGTGGCGGCGCCGCCGTTGGAAGGCCGGAGTTGGTGGTCGTGGTGGCGGCTAAGGGCGGAGGAGGTGGATTTGTGGGGGATGTGAGAGATAATGGAAATGTCCATCAAGACCCGTGGGTGAAAACTTGGATGTTCGACTTAAAAAAATAA

Protein sequence

MQKCLSKTSSNKRGGRELRGRQGEEDEKQQNEKGHEEDRHRRWWQRRKKQRQHKEGQCPKKQQSHGGVVDHLNQTLLWLVLAFLHMFMNIGCLSCGGAAVGRPELVVVVAAKGGGGGFVGDVRDNGNVHQDPWVKTWMFDLKK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025823.1Sed0025823.1mRNA