Sed0025686 (gene) Chayote v1

Overview


Name	Sed0025686
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Basic helix-loop-helix (bHLH) DNA-binding family protein
Location	LG04: 35266033 .. 35267201 (+)
RNA-Seq Expression	Sed0025686
Synteny	Sed0025686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAAGATGGCTATGGAAATTTTGCTCGAGAACGACAGAGAAGATTGGAATTGAACAACGAATATGTAACTCTTAGGAGTTTGGTTCCTAATCCTAGCCAGGTTTTTTAGCTTAGTTAAATGGACAATTTGTTTTTTTTATTTTTGAAAACTGAACTTATTTTTAAGCTTAATTTTTTTATGGTGTCCATCTATAATTAAGATAGTATGTGAATACTAACAAAATTTCAAACAAAAAAAAATAAGGTTCTTGGAAGCTTTCTATTTTTCCAAATTTTAATTTGGTTTTTAAAAATATGAATTAGATGTAGATATTCGAGTAAGAAAAAATATACGACGTAGTTTTTGTAAGCTTGAAATTTTAAAAATAAAAAATGAAAAACAATTTTTTTTTTAATTAGTTTAATTTGATTTTGCTTTATGGGTGTTCCCTAATTTAGCTTTTTTCTACTTCTAACTGCATATTTTTCTTGTTAATTTCTCTTTCATGATCCTCAAGTAGAAACTAGCTAGACCGATTAGATGATTTTCTCTATTTTTGGATGAATTAGAGTTTGATTTTTGTCTGTAAGTACAGAATCAAGCTTTCTGTCCGTTTCCTTTGATTTTAAATTACAAATTAAACTTGATTGATGAAGTTTATCATTTTTTAACAGCTTTAATAATAATTTGGTTTAATGAGGGTGTGGATGAATCTTCTTTTCTTTGATAATTTTAAACAAGCAGGATTGATGGGTTAATCTGATTCAGTACCATTTTAATTTGTTTTTCTCTGTTTCCTTTCTTGAATCTCAAACTAACTGAAGATTCTATTTACCACTTTAATAAACCTTCAAATTCTAGCTTAAATAACAGAGATTAATTAACTAACCTGAAATAGAGAGCTTCATCACCTTTAAACTTAATTTGCTCTCTGTGTTAAACAAAATCTAGCCTTTTTCTTTGTAACCCATCATTGTTTTCTCTGAATCAAACAAATTAACCAGGCGAATAGAGTATCGATTCTTCGAGACGCCATAGAATACATCCGCACGCTTGAAGGATCAGTGAATGAACTGAAACTGCTGCTGGTGGATTACAAGATCATAGAGAGCTCAAATGGAACCAAGTTCACATGTCAGCTGTGTAACAAAGATGGTCACCTTGCATCACACTGCGATCTTTGA

mRNA sequence

ATGAATGAAGATGGCTATGGAAATTTTGCTCGAGAACGACAGAGAAGATTGGAATTGAACAACGAATATGTAACTCTTAGGAGTTTGGTTCCTAATCCTAGCCAGGCGAATAGAGTATCGATTCTTCGAGACGCCATAGAATACATCCGCACGCTTGAAGGATCAGTGAATGAACTGAAACTGCTGCTGGTGGATTACAAGATCATAGAGAGCTCAAATGGAACCAAGTTCACATGTCAGCTGTGTAACAAAGATGGTCACCTTGCATCACACTGCGATCTTTGA

Coding sequence (CDS)

ATGAATGAAGATGGCTATGGAAATTTTGCTCGAGAACGACAGAGAAGATTGGAATTGAACAACGAATATGTAACTCTTAGGAGTTTGGTTCCTAATCCTAGCCAGGCGAATAGAGTATCGATTCTTCGAGACGCCATAGAATACATCCGCACGCTTGAAGGATCAGTGAATGAACTGAAACTGCTGCTGGTGGATTACAAGATCATAGAGAGCTCAAATGGAACCAAGTTCACATGTCAGCTGTGTAACAAAGATGGTCACCTTGCATCACACTGCGATCTTTGA

Protein sequence

MNEDGYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLVDYKIIESSNGTKFTCQLCNKDGHLASHCDL

Homology

[Close]

BLAST of Sed0025686 vs. NCBI nr
Match: EFJ29290.1 (hypothetical protein SELMODRAFT_410122 [Selaginella moellendorffii])

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 282 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 340

[Close]

BLAST of Sed0025686 vs. NCBI nr
Match: XP_024529751.1 (transcription factor EAT1 [Selaginella moellendorffii])

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 157 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 215

[Close]

BLAST of Sed0025686 vs. NCBI nr
Match: EFJ38764.1 (hypothetical protein SELMODRAFT_402928 [Selaginella moellendorffii])

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 315 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 373

[Close]

BLAST of Sed0025686 vs. NCBI nr
Match: XP_024530159.1 (transcription factor EAT1 [Selaginella moellendorffii])

HSP 1 Score: 71.6 bits (174), Expect = 4.0e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 282 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 340

[Close]

BLAST of Sed0025686 vs. NCBI nr
Match: XP_024377595.1 (transcription factor EAT1-like isoform X1 [Physcomitrium patens])

HSP 1 Score: 71.2 bits (173), Expect = 5.2e-09
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLV 64
           G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ 
Sbjct: 441 GVNHFATERQRREYLNEKYQTLRSLVPNPTKADRASIVADAIEYVKELKRTVQELQLLVQ 500

Query: 65  D-YKIIESSNGTKFTCQLCNKDGHLAS 91
           +  +    S+G K    + + D +  S
Sbjct: 501 EKRRAAGDSSGGKRRRSMDDADNYAGS 527

[Close]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot
Match: Q7X8R0 (Transcription factor EAT1 OS=Oryza sativa subsp. japonica OX=39947 GN=EAT1 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-09
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  NFA ER+RR +LN ++ TLR L PNP++ +R SI+ DAIEYI  L  +V ELK+L+
Sbjct: 263 GKANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILV 321

[Close]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot
Match: Q8GX46 (Transcription factor bHLH91 OS=Arabidopsis thaliana OX=3702 GN=BHLH91 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-07
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 9   FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           F  ER+RR  LN  Y  L+ L+P+PS+ +R SIL+D I+YI  L   V+ELK L+
Sbjct: 216 FTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLV 270

[Close]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot
Match: Q9LND0 (Transcription factor bHLH89 OS=Arabidopsis thaliana OX=3702 GN=BHLH89 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-06
Identity = 28/78 (35.90%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 1   MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGS 60
           +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +
Sbjct: 205 LNRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRT 264

Query: 61  VNELKLLLVDYKIIESSN 74
           ++E K LLV+ K ++  N
Sbjct: 265 IDEFK-LLVEKKRVKQRN 281

[Close]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot
Match: Q84TK1 (Transcription factor bHLH10 OS=Arabidopsis thaliana OX=3702 GN=BHLH10 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-06
Identity = 21/52 (40.38%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 12  ERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           ER+RR+  N+ +  L++L+PNP++ +R SI+ +AI+YI+ L  ++ E K+L+
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLV 303

[Close]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot
Match: Q9CAD0 (Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.6e-06
Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 7   GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK 61
           GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Sbjct: 404 GNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458

[Close]

BLAST of Sed0025686 vs. ExPASy TrEMBL
Match: D8QNH7 (BHLH domain-containing protein OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_402928 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 315 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 373

[Close]

BLAST of Sed0025686 vs. ExPASy TrEMBL
Match: D8RDP9 (BHLH domain-containing protein OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_410122 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           G  +FA ERQRR  LN +Y TLRSLVPNPS+A+R SI+ DAIEY++ L+ +V EL+LL+
Sbjct: 282 GINHFATERQRREYLNEKYQTLRSLVPNPSKADRASIVADAIEYVKELKRTVQELQLLV 340

[Close]

BLAST of Sed0025686 vs. ExPASy TrEMBL
Match: A0A2K1KEW0 (BHLH domain-containing protein OS=Physcomitrium patens OX=3218 GN=PHYPA_008689 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLV 64
           G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ 
Sbjct: 382 GVNHFATERQRREYLNEKYQTLRSLVPNPTKADRASIVADAIEYVKELKRTVQELQLLVQ 441

Query: 65  D-YKIIESSNGTKFTCQLCNKDGHLAS 91
           +  +    S+G K    + + D +  S
Sbjct: 442 EKRRAAGDSSGGKRRRSMDDADNYAGS 468

[Close]

BLAST of Sed0025686 vs. ExPASy TrEMBL
Match: A0A7I4E393 (BHLH domain-containing protein OS=Physcomitrium patens OX=3218 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLV 64
           G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ 
Sbjct: 441 GVNHFATERQRREYLNEKYQTLRSLVPNPTKADRASIVADAIEYVKELKRTVQELQLLVQ 500

Query: 65  D-YKIIESSNGTKFTCQLCNKDGHLAS 91
           +  +    S+G K    + + D +  S
Sbjct: 501 EKRRAAGDSSGGKRRRSMDDADNYAGS 527

[Close]

BLAST of Sed0025686 vs. ExPASy TrEMBL
Match: A0A7I4E7V0 (BHLH domain-containing protein OS=Physcomitrium patens OX=3218 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 5   GYGNFARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLLV 64
           G  +FA ERQRR  LN +Y TLRSLVPNP++A+R SI+ DAIEY++ L+ +V EL+LL+ 
Sbjct: 382 GVNHFATERQRREYLNEKYQTLRSLVPNPTKADRASIVADAIEYVKELKRTVQELQLLVQ 441

Query: 65  D-YKIIESSNGTKFTCQLCNKDGHLAS 91
           +  +    S+G K    + + D +  S
Sbjct: 442 EKRRAAGDSSGGKRRRSMDDADNYAGS 468

[Close]

BLAST of Sed0025686 vs. TAIR 10
Match: AT2G31210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 9   FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELKLLL 64
           F  ER+RR  LN  Y  L+ L+P+PS+ +R SIL+D I+YI  L   V+ELK L+
Sbjct: 216 FTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLV 270

[Close]

BLAST of Sed0025686 vs. TAIR 10
Match: AT1G06170.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-07
Identity = 28/78 (35.90%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 1   MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGS 60
           +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +
Sbjct: 205 LNRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRT 264

Query: 61  VNELKLLLVDYKIIESSN 74
           ++E K LLV+ K ++  N
Sbjct: 265 IDEFK-LLVEKKRVKQRN 281

[Close]

BLAST of Sed0025686 vs. TAIR 10
Match: AT1G06170.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-07
Identity = 28/78 (35.90%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 1   MNEDGYGN-----FARERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGS 60
           +N  G G+     F  ER+RR+   + +  L++L+PNP++ +R SI+ +AI+YI+ L  +
Sbjct: 205 LNRKGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRT 264

Query: 61  VNELKLLLVDYKIIESSN 74
           ++E K LLV+ K ++  N
Sbjct: 265 IDEFK-LLVEKKRVKQRN 281

[Close]

BLAST of Sed0025686 vs. TAIR 10
Match: AT1G63650.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 6.8e-07
Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 7   GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK 61
           GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Sbjct: 404 GNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458

[Close]

BLAST of Sed0025686 vs. TAIR 10
Match: AT1G63650.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 6.8e-07
Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 7   GNFA-RERQRRLELNNEYVTLRSLVPNPSQANRVSILRDAIEYIRTLEGSVNELK 61
           GN A  E++RR +LN  ++TLRS++P+ S+ ++VSIL D IEY++ L+  V EL+
Sbjct: 404 GNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458

The following BLAST results are available for this feature:

BLAST of Sed0025686 vs. NCBI nr


Match Name	E-value	Identity	Description
EFJ29290.1	4.0e-09	61.02	hypothetical protein SELMODRAFT_410122 [Selaginella moellendorffii]	[more]
XP_024529751.1	4.0e-09	61.02	transcription factor EAT1 [Selaginella moellendorffii]	[more]
EFJ38764.1	4.0e-09	61.02	hypothetical protein SELMODRAFT_402928 [Selaginella moellendorffii]	[more]
XP_024530159.1	4.0e-09	61.02	transcription factor EAT1 [Selaginella moellendorffii]	[more]
XP_024377595.1	5.2e-09	45.98	transcription factor EAT1-like isoform X1 [Physcomitrium patens]	[more]

BLAST of Sed0025686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7X8R0	4.1e-09	54.24	Transcription factor EAT1 OS=Oryza sativa subsp. japonica OX=39947 GN=EAT1 PE=1 ...	[more]
Q8GX46	2.3e-07	49.09	Transcription factor bHLH91 OS=Arabidopsis thaliana OX=3702 GN=BHLH91 PE=2 SV=1	[more]
Q9LND0	7.3e-06	35.90	Transcription factor bHLH89 OS=Arabidopsis thaliana OX=3702 GN=BHLH89 PE=1 SV=1	[more]
Q84TK1	9.6e-06	40.38	Transcription factor bHLH10 OS=Arabidopsis thaliana OX=3702 GN=BHLH10 PE=1 SV=1	[more]
Q9CAD0	9.6e-06	47.27	Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1	[more]

BLAST of Sed0025686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D8QNH7	1.9e-09	61.02	BHLH domain-containing protein OS=Selaginella moellendorffii OX=88036 GN=SELMODR...	[more]
D8RDP9	1.9e-09	61.02	BHLH domain-containing protein OS=Selaginella moellendorffii OX=88036 GN=SELMODR...	[more]
A0A2K1KEW0	2.5e-09	45.98	BHLH domain-containing protein OS=Physcomitrium patens OX=3218 GN=PHYPA_008689 P...	[more]
A0A7I4E393	2.5e-09	45.98	BHLH domain-containing protein OS=Physcomitrium patens OX=3218 PE=4 SV=1	[more]
A0A7I4E7V0	2.5e-09	45.98	BHLH domain-containing protein OS=Physcomitrium patens OX=3218 PE=4 SV=1	[more]

BLAST of Sed0025686 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31210.1	1.6e-08	49.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G06170.1	5.2e-07	35.90	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G06170.2	5.2e-07	35.90	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G63650.1	6.8e-07	47.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G63650.2	6.8e-07	47.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 9..58 e-value: 1.2E-11 score: 54.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 9..53 e-value: 3.4E-11 score: 43.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 3..52 score: 12.976084
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 8..65 e-value: 9.1E-13 score: 49.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 9..63
None	No IPR available	PANTHER	PTHR46834:SF1	TRANSCRIPTION FACTOR BHLH91	coord: 7..63
None	No IPR available	PANTHER	PTHR46834	TRANSCRIPTION FACTOR BHLH91	coord: 7..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025686.1	Sed0025686.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0046983	protein dimerization activity