Sed0025399 (gene) Chayote v1

Overview


Name	Sed0025399
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein YLS9
Location	LG02: 41952027 .. 41952728 (+)
RNA-Seq Expression	Sed0025399
Synteny	Sed0025399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAACCGGCGGCGGCGTTTCGTTTCCGGTCATTTTCCACGACGGCGAACGAGATTCCGACATCGGCTCCGTCGTCGTGTCATCTTCCATGGAGTTGAAGAATTTTCAGTCGATTTTGAGCAAGATGATCGGAATCTCTTCGCATCAGTTCACGGTTTACCTAGCGGAGTATAAGATCTCTATGAATTCGACGAAGATCCGGCGGAGGATTCCTATCACCGGGAAGGTCAACTTCGGAGCGATCTCCGGCGAAAAGAGCTGTTTCTTTCTCGTGGTTTTGAAGCGGTCGAGACGCGAGCGGAGGCGGAAGGTACAAGAAAACGAAAACGGATACTATTTTGAACAATCGAAGAAGAAGAATGTGGTGTTGTTGAGACGAAACGCCGGCGTTGAAAACGAATTGCTCTCCGGCTTAATCTCGCCGGCAATTGGCGGATTTGAATACGAAAAGCGATTTCGGAGGCTGCAATTGGAGGAGGCGAAATACTTGCTCGGCGTAGGGTTAAGCAATCTGACGGTTGGCGGTAGCGGAGACGGCGGCCGGAGATCGGGAACGGCGGTCTGTAGGCACTGCCTGAAGGCGGAAGAGAGCGGCGTGGTGGCGGCCGGCTTTCACTGCTGCGCCTACGACACCGTGACGACCGGGTTCCGGTCTCGGGCCGGTCCGATTGCCCGGCCCGTAAAAGAATCGGATTAA

mRNA sequence

ATGGTGGAAACCGGCGGCGGCGTTTCGTTTCCGGTCATTTTCCACGACGGCGAACGAGATTCCGACATCGGCTCCGTCGTCGTGTCATCTTCCATGGAGTTGAAGAATTTTCAGTCGATTTTGAGCAAGATGATCGGAATCTCTTCGCATCAGTTCACGGTTTACCTAGCGGAGTATAAGATCTCTATGAATTCGACGAAGATCCGGCGGAGGATTCCTATCACCGGGAAGGTCAACTTCGGAGCGATCTCCGGCGAAAAGAGCTGTTTCTTTCTCGTGGTTTTGAAGCGGTCGAGACGCGAGCGGAGGCGGAAGGTACAAGAAAACGAAAACGGATACTATTTTGAACAATCGAAGAAGAAGAATGTGGTGTTGTTGAGACGAAACGCCGGCGTTGAAAACGAATTGCTCTCCGGCTTAATCTCGCCGGCAATTGGCGGATTTGAATACGAAAAGCGATTTCGGAGGCTGCAATTGGAGGAGGCGAAATACTTGCTCGGCGTAGGGTTAAGCAATCTGACGGTTGGCGGTAGCGGAGACGGCGGCCGGAGATCGGGAACGGCGGTCTGTAGGCACTGCCTGAAGGCGGAAGAGAGCGGCGTGGTGGCGGCCGGCTTTCACTGCTGCGCCTACGACACCGTGACGACCGGGTTCCGGTCTCGGGCCGGTCCGATTGCCCGGCCCGTAAAAGAATCGGATTAA

Coding sequence (CDS)

ATGGTGGAAACCGGCGGCGGCGTTTCGTTTCCGGTCATTTTCCACGACGGCGAACGAGATTCCGACATCGGCTCCGTCGTCGTGTCATCTTCCATGGAGTTGAAGAATTTTCAGTCGATTTTGAGCAAGATGATCGGAATCTCTTCGCATCAGTTCACGGTTTACCTAGCGGAGTATAAGATCTCTATGAATTCGACGAAGATCCGGCGGAGGATTCCTATCACCGGGAAGGTCAACTTCGGAGCGATCTCCGGCGAAAAGAGCTGTTTCTTTCTCGTGGTTTTGAAGCGGTCGAGACGCGAGCGGAGGCGGAAGGTACAAGAAAACGAAAACGGATACTATTTTGAACAATCGAAGAAGAAGAATGTGGTGTTGTTGAGACGAAACGCCGGCGTTGAAAACGAATTGCTCTCCGGCTTAATCTCGCCGGCAATTGGCGGATTTGAATACGAAAAGCGATTTCGGAGGCTGCAATTGGAGGAGGCGAAATACTTGCTCGGCGTAGGGTTAAGCAATCTGACGGTTGGCGGTAGCGGAGACGGCGGCCGGAGATCGGGAACGGCGGTCTGTAGGCACTGCCTGAAGGCGGAAGAGAGCGGCGTGGTGGCGGCCGGCTTTCACTGCTGCGCCTACGACACCGTGACGACCGGGTTCCGGTCTCGGGCCGGTCCGATTGCCCGGCCCGTAAAAGAATCGGATTAA

Protein sequence

MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYKISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQENENGYYFEQSKKKNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGLSNLTVGGSGDGGRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGPIARPVKESD

Homology

[Close]

BLAST of Sed0025399 vs. NCBI nr
Match: KAG6596614.1 (hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.2 bits (822), Expect = 7.2e-84
Identity = 176/250 (70.40%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVET G VSFPV+FHDGERD+D+GSV VSSS E KNFQSILSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQENENGYYF---- 120
           ISM+ST KIRRRIPITGKVNFGAI+ EK+CFFLVVLKRSRRERRRK+Q NE+ Y      
Sbjct: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDISSAT 120

Query: 121 ------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYL 180
                   SKKK    NV+LL+RN G+ENELL G ISPA   FEY++RF +LQLE  KYL
Sbjct: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPATNRFEYDQRFWKLQLEMEKYL 180

Query: 181 LGVGLSNLTVGGSG--DGGRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAG 234
           + +G  NL +GG G  +G  R  TAVC  CL A+E+G VAAGFHCCA+D VTTGFRS AG
Sbjct: 181 INIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETG-VAAGFHCCAHDAVTTGFRSHAG 240

[Close]

BLAST of Sed0025399 vs. NCBI nr
Match: KAG7028150.1 (hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-83
Identity = 175/250 (70.00%), Postives = 196/250 (78.40%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVET G VSFPV+FHDGERD+D+GSV VSSS E KNFQSILSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMNST-KIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQENENGYYF---- 120
           ISM+ST KIRRRIPITGKVNFGAI+ EK+CFFLVVLKRSRRERRRK+Q NE+ Y F    
Sbjct: 61  ISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGNEDEYDFSSAT 120

Query: 121 ------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYL 180
                   SKKK    NV+LL+RN G+ENELL G ISP    FEY++RF +LQLE  KYL
Sbjct: 121 KTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYL 180

Query: 181 LGVGLSNLTVGGSG--DGGRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAG 234
           + +G  NL +GG G  +G  R  TAVC  CL A+E+G VAAGFHCCA+D VT GFRS AG
Sbjct: 181 IDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETG-VAAGFHCCAHDAVTMGFRSHAG 240

[Close]

BLAST of Sed0025399 vs. NCBI nr
Match: XP_031739121.1 (uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical protein Csa_000824 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-81
Identity = 170/253 (67.19%), Postives = 195/253 (77.08%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           M ET  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKV-QENENGYYFEQS 120
           IS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSRRERRRKV  +NE  YYF  +
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 KK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKY 180
            K              +NV+LLRRN G+ENELL+G ISP +  +EYE R R+LQLE+ KY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LLGVGLSNLTVGGSGDGGR----RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 234
           L+ + +SNL +G  GDGGR    RS   +C  CL A+E G VAAGFHCCA D VT GFRS
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERG-VAAGFHCCANDAVTAGFRS 240

[Close]

BLAST of Sed0025399 vs. NCBI nr
Match: KAA0043818.1 (protein YLS9 [Cucumis melo var. makuwa] >TYK25314.1 protein YLS9 [Cucumis melo var. makuwa])

HSP 1 Score: 312.4 bits (799), Expect = 3.3e-81
Identity = 170/251 (67.73%), Postives = 197/251 (78.49%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           M +T  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MADTVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKV-QENENGYYF--- 120
           IS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSRRERRRKV  +NE  YYF   
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 -------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKY 180
                   Q KKK    NV+LLRRN G+ENELLSG +SP +  +EYE+R R+LQLE  KY
Sbjct: 121 TKTQTKTNQPKKKNPPENVMLLRRNGGIENELLSGFVSPVMDRYEYEERIRKLQLEREKY 180

Query: 181 LLGVGLSNLTVGGSGDGGR----RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 232
           L+ + ++NLT+ G GDGGR    RS T +CR C+ A+E G VAAGFHCCA D VT GFRS
Sbjct: 181 LISLQINNLTMRGGGDGGRNNSGRSETRICRDCVSAKERG-VAAGFHCCANDAVTAGFRS 240

[Close]

BLAST of Sed0025399 vs. NCBI nr
Match: KAG6580743.1 (hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.1 bits (788), Expect = 6.3e-80
Identity = 167/253 (66.01%), Postives = 193/253 (76.28%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVET GGVSFP++FHDGE+D  IGSV+VSSS + KNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MVETAGGVSFPIVFHDGEQDVPIGSVIVSSSTDFKNFQSDLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISMN-STKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQE-NENGYYFEQS 120
           IS++ STKIRRRIPITGKVNFGAIS EK+ FFLVVLKRSRRERRRKV + NE+ YY   +
Sbjct: 61  ISLDFSTKIRRRIPITGKVNFGAISCEKNSFFLVVLKRSRRERRRKVTDNNEDEYYLPSA 120

Query: 121 KK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKY 180
            K              +NV+LLRRNAG+EN++LSG ISPA+  ++YE+R R+LQLE   Y
Sbjct: 121 TKTKAKTNQPNKKNPPENVMLLRRNAGIENKMLSGFISPAMDRYDYEERIRKLQLERENY 180

Query: 181 LLGVGLSNLTVGGSGDGG----RRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 234
              VGL NLT GG GDGG     +S T  CR CL A+E+G  A GFHCCA D VT GFRS
Sbjct: 181 STSVGLRNLTAGGDGDGGWNGSVKSKTTACRDCLSAKETG-AAVGFHCCANDAVTAGFRS 240

[Close]

BLAST of Sed0025399 vs. ExPASy TrEMBL
Match: A0A0A0LER6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.5e-82
Identity = 170/253 (67.19%), Postives = 195/253 (77.08%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           M ET  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKV-QENENGYYFEQS 120
           IS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSRRERRRKV  +NE  YYF  +
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 KK--------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKY 180
            K              +NV+LLRRN G+ENELL+G ISP +  +EYE R R+LQLE+ KY
Sbjct: 121 TKTQTKTNLLKKKNPPENVMLLRRNGGIENELLAGFISPVMDRYEYEDRIRKLQLEKEKY 180

Query: 181 LLGVGLSNLTVGGSGDGGR----RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 234
           L+ + +SNL +G  GDGGR    RS   +C  CL A+E G VAAGFHCCA D VT GFRS
Sbjct: 181 LMSIQMSNLRMGDGGDGGRNKSGRSERRICGDCLSAKERG-VAAGFHCCANDAVTAGFRS 240

[Close]

BLAST of Sed0025399 vs. ExPASy TrEMBL
Match: A0A5A7TLT1 (Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.6e-81
Identity = 170/251 (67.73%), Postives = 197/251 (78.49%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           M +T  GVSFP++FHDGERD++IGSV+VSSS E KNFQS LSKMIGISSHQFTVYLAEYK
Sbjct: 1   MADTVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSSLSKMIGISSHQFTVYLAEYK 60

Query: 61  ISM-NSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKV-QENENGYYF--- 120
           IS+ +STKIRRRIPITGKVNFGAISGEK+ FFLVVLKRSRRERRRKV  +NE  YYF   
Sbjct: 61  ISLDSSTKIRRRIPITGKVNFGAISGEKNSFFLVVLKRSRRERRRKVIHDNEEDYYFSSA 120

Query: 121 -------EQSKKK----NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKY 180
                   Q KKK    NV+LLRRN G+ENELLSG +SP +  +EYE+R R+LQLE  KY
Sbjct: 121 TKTQTKTNQPKKKNPPENVMLLRRNGGIENELLSGFVSPVMDRYEYEERIRKLQLEREKY 180

Query: 181 LLGVGLSNLTVGGSGDGGR----RSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 232
           L+ + ++NLT+ G GDGGR    RS T +CR C+ A+E G VAAGFHCCA D VT GFRS
Sbjct: 181 LISLQINNLTMRGGGDGGRNNSGRSETRICRDCVSAKERG-VAAGFHCCANDAVTAGFRS 240

[Close]

BLAST of Sed0025399 vs. ExPASy TrEMBL
Match: A0A6P9E6Z6 (uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 131/252 (51.98%), Postives = 167/252 (66.27%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLA-EY 60
           MV    GVSFPV+F DGER++ IG VVV  S+  KNFQSILS+ IGIS HQF+VYLA +Y
Sbjct: 8   MVGIADGVSFPVVFFDGERETSIGDVVVHPSLGFKNFQSILSRKIGISPHQFSVYLAVKY 67

Query: 61  KISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQE--NENGYY--- 120
           +     ++  R+IPITGKVNF AIS EK CFFLV+LKRSRRER+R+ ++   E  YY   
Sbjct: 68  R-----SETLRKIPITGKVNFAAISREKDCFFLVILKRSRRERKRRTRKEFQEEEYYASS 127

Query: 121 ---FEQSKKK---NVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGV 180
               ++  KK   NV+LLRR+AG E +   G +SP +    YEKR + LQ+E  +YL+ +
Sbjct: 128 MSVVQRRNKKVPVNVMLLRRDAGTEGQAFPGYVSPIVDRDGYEKRVKELQMERERYLINM 187

Query: 181 GLSNLTV-----GGSGDGG-RRSGT--AVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRS 233
           GLS L++     GG G+ G  R+G     C  C++A++ G    GFH C YDTVT GFRS
Sbjct: 188 GLSGLSLEKEDNGGVGERGVARNGVVDVECEECMRAKQIG-DEVGFHGCVYDTVTVGFRS 247

[Close]

BLAST of Sed0025399 vs. ExPASy TrEMBL
Match: A0A6A1UKZ8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 9.2e-53
Identity = 123/249 (49.40%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           MVE   GVSFPV+F DGER+S+IG+V+VS S++ K+FQSI+S+ IGIS HQF+VYLA   
Sbjct: 1   MVEIASGVSFPVVFFDGERESNIGNVLVSPSLQFKSFQSIMSRKIGISPHQFSVYLA--- 60

Query: 61  ISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQ--ENENGYYFEQS 120
              + ++  R+IPITGK NFG I  +K CFFLVVLKRSRRER+R+ Q    E+ YY    
Sbjct: 61  -VKHRSETLRKIPITGKFNFGTIFRDKDCFFLVVLKRSRRERKRRNQRASQEDKYYASSM 120

Query: 121 K--------KKNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQLEEAKYLLGVGL 180
                     +NV+LLRRN  + ++   G  SP +    YEKR R LQ+E  +YL  +GL
Sbjct: 121 NVVQRLNKIPENVMLLRRNDAIGSQGFPGFASPIVDRAGYEKRVRELQMERERYLTNMGL 180

Query: 181 SNLTVGGSGDGG------RRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGFRSRAGP 234
             L +G   +GG       R+G   C  C++A+  G    GFH C YD VT+GFRS AGP
Sbjct: 181 RGLCLGKEDNGGVDENVVTRNGVVECEECMRAKAIG-TEVGFHWCVYDAVTSGFRSPAGP 240

[Close]

BLAST of Sed0025399 vs. ExPASy TrEMBL
Match: A0A540NAB7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_006405 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 123/255 (48.24%), Postives = 155/255 (60.78%), Query Frame = 0


Query: 1   MVETGGGVSFPVIFHDGERDSDIGSVVVSSSMELKNFQSILSKMIGISSHQFTVYLAEYK 60
           M+E   GVSFPV+F DGE ++DIG +VV   ++   F S+LS+ IGI   QFTV+L    
Sbjct: 1   MMEAERGVSFPVVFSDGETETDIGDLVVYPKLDFSRFLSVLSQKIGILPGQFTVFL---- 60

Query: 61  ISMNSTKIRRRIPITGKVNFGAISGEKSCFFLVVLKRSRRERRRKVQENENGYYFEQSKK 120
              +S + R+RIPITGKVNF AIS EK+CFFLV LKRSRRERRRK    +  ++ +  ++
Sbjct: 61  ---SSPETRQRIPITGKVNFSAISREKNCFFLVELKRSRRERRRKNHNYQVPHHHQDFRE 120

Query: 121 ---------------------KNVVLLRRNAGVENELLSGLISPAIGGFEYEKRFRRLQL 180
                                +NV+LL+R  G+E E ++GL  P  G  EYE R R LQ+
Sbjct: 121 DEYRNTASLGAQNPINKNLHLENVMLLKR--GMEIENVAGLAMPFAGRVEYENRVRELQI 180

Query: 181 EEAKYLLGVGLSNLTVGGSGDG-GRRSGTAVCRHCLKAEESGVVAAGFHCCAYDTVTTGF 234
           E  +YL+ +GL      G G G GRRSG  VC  C +A E G    GFH CAYD VT GF
Sbjct: 181 ENERYLMKMGLGR--ADGLGLGLGRRSGATVCEECSRANEMG-SEVGFHWCAYDPVTFGF 240

The following BLAST results are available for this feature:

BLAST of Sed0025399 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596614.1	7.2e-84	70.40	hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028150.1	2.7e-83	70.00	hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_031739121.1	1.1e-81	67.19	uncharacterized protein LOC116402855 [Cucumis sativus] >KGN59202.1 hypothetical ...	[more]
KAA0043818.1	3.3e-81	67.73	protein YLS9 [Cucumis melo var. makuwa] >TYK25314.1 protein YLS9 [Cucumis melo v...	[more]
KAG6580743.1	6.3e-80	66.01	hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0025399 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LER6	5.5e-82	67.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G780540 PE=4 SV=1	[more]
A0A5A7TLT1	1.6e-81	67.73	Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004520 ...	[more]
A0A6P9E6Z6	1.9e-53	51.98	uncharacterized protein LOC118347905 OS=Juglans regia OX=51240 GN=LOC118347905 P...	[more]
A0A6A1UKZ8	9.2e-53	49.40	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004710 PE=4 SV=1	[more]
A0A540NAB7	1.5e-47	48.24	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_006405 PE=4 SV=1	[more]

BLAST of Sed0025399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36351	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..232
None	No IPR available	PANTHER	PTHR36351:SF1	EMBRYO SAC DEVELOPMENT ARREST 12	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025399.1	Sed0025399.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane