Sed0025153 (gene) Chayote v1

Overview


Name	Sed0025153
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chaperone protein dnaj 16
Location	LG10: 20268872 .. 20272823 (+)
RNA-Seq Expression	Sed0025153
Synteny	Sed0025153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGGTGTTGTACCGTCGAGATCCGTATGAGGTACTCGGTGTCTCTAGGAACTCCACGGCTCAGGAAATCAAAAGCGCTTACCGAAAAATGGCTCTCAAGTTGGTTTTACTAAATATGAAATATTTTAGCTCTATTTGCTTCCTTTTCTTGTTATATTCGTGCAACTTCTATACTTTTTTCTTGACATTTATTTCACCTTTAAAGATTACCGTCTTATTCCAACTTCGAATTCATATGCTATCATTTTCCTTAGCTTTATTCTCGTGAGACATGGAAGGGGTTTTTTTTTTTTTTTTTTTTTAATATGGATGAGTGTATGTGGGGTAATTTGTATAAATGGGTTTTTTTTTTGAACTTATTATCAAAATGGGTTCCTTTTCAAATATTTTGTGGAAATGGGTTCATTTTTTTGTCCTTTTGTCATAGTTGTCAACTTTTTTGTCATTTTGTTATTTTTTTCAAAACACCTATATAAAAGTTATGCCACCTAGATTTCAACTTTAAATAAATATTAGTCAAACATTAATTTTAACCAAGTCTTTCCTTTTACTTCTCAAACTAATTTTTTTTTACCTCTTCTTACAATGAATTATTATTATTATATAATTTTTTAACATAATATCATTATTTATTTAATTTTGTATACAATTTTGAATATATATTTATCAACTATTTTAAATTACGTAACACTAAAAGTTATATTTTAATTCGAAAATAATTACTATTACTGTAAATTATTCAAAAGTATTTTTAATATTTTATAAAAAAATTATGTTTTCAATGTAATACATTAAAATAATATTTTAATTTATTAGATAAAAATAATTTTTTAAAATCACATTCAAATAATTTGGAAAAGGGAGACCACAAACTTACATTATTACCTTAAGAATCGAATATGTGATTATGTTGTTGAATTGAATTATCACCAAACAATGAAACTATCTGACCACAAGATGCAATATAAAATAATTTAAAACAACTTGACAATAATATTTATATTAATAATAATAATAATTTGTTATCGTGATATTTTTTAATAAATTTAACCCAACTTAAATGAGATAGTTAAAATATAAAATCAAAATTTTAAAATAAAACAACGAAGTATTAATAGTACCGTAGTAATTATATTATTTGAATCATCAATTTAGGGATTAATTCAATATTTTTTTGGAAAATTATGTCTAATTTCACAAAATAATTGCAGATAGAAAAATTTGAAAATATTTGCATTCATTATAAAAAATTCAGTATGGTTAATATTCATTATACAATATAGTTTATATTATATAATTATGTATTAATAATACCGTATAATGAATATTAATCCTACCGTGTTTGATTATGATTGTTTTTTTTTACCAAGTATTGTAAATACTTTTTCAATTTTGTCTATTCCTAAAAAGACCCCTTAAAATATTTGATAAATGTATATAAAAATCAGTATAAAAATTAAATAAATATAAGATGATATTATATTTGTCCCCAAGGGGAGCTTTAGCGATTGAGGTGAAGGACTTCCCGGTTTTCAAAAAAAAATGATATTATATATATATAATAACCAGAAGGGAAAAAAAACAAAAAGAAAAAATGTTTGAAAAATCAAAGAAAATATTTTGTTAAAATTAATGTTTTGACTATTATTTATCTAAAGTTGAATTCCAAGTGGCATATTTTTGGGTGGATATTTTCAAAAAAAGTAGACAACTACTACAAAAGGACAAAAAAATGAACCCATTTTAATAAAATATTTGAAAGGGAACCCATTTTAAAAAAATATTTAAAAGGGAACCCATTTTGATAATAAGTTTCAAAAAAGAACCTATCTATACAATTTACCCGTGTATGTGCCTCACTATTCCTATTGGACATAACTTCTGACTTTACAACACTTGATTCGATTCAACCGCTCAATATCCTTGGAAGGGTATTATTGTTTTTTTTTGTAAGGTAGGATAGCATATCACGTAAAGTAGCATTTAGATTGTTCCCCAAACTAGTGCGCTTTTGCCCTTTACAAAAAGGATAGAGAAGTGCGGTGAGAGTTTTAAATCACTTTCAAGCGTTGGGTTTCCGACTTACCAACACCTAACTGTAGCACTACGAATTGCTTGCTTGTTCTGTCCCTCGCAGCAAGTGCCAATGAATTTTAACAATCTCAAGTATCACTTGTTAATCCTTAATCACACTTTCAGCTCGAGCTGGTCGAGTTAGGGATTGGTGACAATGGAAAATCTTTCATAAAGTTGTCCAAGTTACATTTATGGTTTTTAAACCTCTTGTTATTAATATATCAAAGTGGTCCAAATAACATTTGTGGTTTTTAATCCTCTTGTACTAAATATGTTGATGTGATAGTTGACAAGGTCACAAAACTCTAATTTTGAAACCAGGTATCACCCCGACAAGAATGCAAATGATCCCAAAGCTGCGGACATGTTCACGGAGGTCACTTTTTCCTACACCATTTTGTCAGATCCCGAAAAAAGACGGCAATATGATGCTGCTGGATTTGAGGTGAAATATAATTCATTTTGGTTCACACATTTTATGAAAGTTACCATGTACAAGATGTGTTCATATAAGAGCGTTTGGAGCAAAGATGTCAAATGGGGGAAATGGGAAGGAGGATGATTCTTTGTGTTTGGGCCACCAAGAATGAGTAATTGATGATTAGAATAAGTAGTTATTTTGAGTAATTAGAAATTGAGGTTGTATTGATAACTCGTTTGAATATGGATTTTTTTCGAAGAGTTGCACCTCGTTTGGATGTGGATTTTGGTAGAGGGGTTACAGAAATGAGTGGTTTCAAAATGAGTTATTTATAAGTGGTTAGAAATTAGTGGTTATTTTGAGTGATTTCTTTGAGTGTTACCATGACTCTTCGGATATAGTTTTTTGAAGAGGGGTGGTAAAAGCTCATTTGTAATAGTTGGTTAAATACTAAATTTAAACACCTCCTAATGTCATTGTGGGTAACATCATACAGGAGTTATCAAGAGGTCATATGATTCACTGCTCTCATGTTAATAAGTTATTACTGCATAATATTTTATTTTCTTTTAGTGAGTTTTTTTAGTTATCGTTATTATAATGTTTATCTAGACAAAAGAAAAGTTCATCATATACATAAGTAACCCTGAAAGTTGTGTAGGAGAAAAACTTACCTACTTGTCCATGTGTAGGGTATTCCTACATTTTACCTGTGGCACCATTTTGGCCACATAATTTTTTCTTTCTTTCTTTTTTATAATTTTATTTTGTTTAGTCTTCAAGGGGTGGCGCAGTGGTTGAAGACTTGAGCTTTGAGGGTATGCTCCCTTTAAGGTTCAATGTTCAAGACTCGCCTGCGACACTATTCCTTCGATGTCTTCGGTTCCTGGCCTAGGGACGGGTGTGGTTACCTTGTTTAAAAAAAAATTTGAAAAAATAAATTATATATGATAATTTTATTTTGTTTATAACAAAAAGAATTTGTGTGGTATTTAATGATGCCACATAAATGAAATGTTGGAACGCTCTACACATAGGCAAGTTTTCCTCTTTCTATAGGTATAATTTTGGAGACCTTATTTTTAATTTCTTTAATTTGATGGTCCCCAAGGGGTGGCGCAGTGGTTGAAGACTTGGACTTTGAGGATATGCTCCCCTCAAGGTTCCAGGTTCGAGATTCAGCTGTGACGATATTCCTTCGATGTCTCCGGTGCCTGGCCTAGGAACGAGCGTGGTTACCTTGATTAAAAAAAAAATTTCTTTAATTTGATGGCGATTCTTATGAAAGTATGTTGAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTGTAGGAGGAGGGTACAAAGGGCGGAAAGGTCACAACCGCCGGGATGTATTTTTTCGGTTTCCCTGTCTATCGATTTGACCAAATAGCAAACTCGGTAAGTCAACTATGA

mRNA sequence

ATGCAGCGGTGTTGTACCGTCGAGATCCGTATGAGGTATCACCCCGACAAGAATGCAAATGATCCCAAAGCTGCGGACATGTTCACGGAGGTCACTTTTTCCTACACCATTTTGTCAGATCCCGAAAAAAGACGGCAATATGATGCTGCTGGATTTGAGGAGGAGGGTACAAAGGGCGGAAAGGTCACAACCGCCGGGATGTATTTTTTCGGTTTCCCTGTCTATCGATTTGACCAAATAGCAAACTCGGTAAGTCAACTATGA

Coding sequence (CDS)

ATGCAGCGGTGTTGTACCGTCGAGATCCGTATGAGGTATCACCCCGACAAGAATGCAAATGATCCCAAAGCTGCGGACATGTTCACGGAGGTCACTTTTTCCTACACCATTTTGTCAGATCCCGAAAAAAGACGGCAATATGATGCTGCTGGATTTGAGGAGGAGGGTACAAAGGGCGGAAAGGTCACAACCGCCGGGATGTATTTTTTCGGTTTCCCTGTCTATCGATTTGACCAAATAGCAAACTCGGTAAGTCAACTATGA

Protein sequence

MQRCCTVEIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAGMYFFGFPVYRFDQIANSVSQL

Homology

[Close]

BLAST of Sed0025153 vs. NCBI nr
Match: XP_019246543.1 (PREDICTED: chaperone protein dnaJ 16-like [Nicotiana attenuata] >OIT03800.1 chaperone protein dnaj 16 [Nicotiana attenuata])

HSP 1 Score: 130.6 bits (327), Expect = 6.7e-27
Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAGM 67
           ++ ++YHPDKNANDPKAADMF EVTFSY ILSDP+KRRQYD+AGFEE+ +K GKVT+AGM
Sbjct: 42  KLALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEEDSSKTGKVTSAGM 101

Query: 68  YFFGFPVYRFDQIANSVS 86
           YF GFPVY  DQ  NSV+
Sbjct: 102 YFLGFPVYHIDQTQNSVT 119

[Close]

BLAST of Sed0025153 vs. NCBI nr
Match: OIT08976.1 (chaperone protein dnaj 16, partial [Nicotiana attenuata])

HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 12 RYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAGMYFFG 71
          RYHPDKNANDPKAADMF EVTFSY ILSDP+KRRQYD+AGFEE+ +K GKVT+AGMYF G
Sbjct: 1  RYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEEDSSKTGKVTSAGMYFLG 60

Query: 72 FPVYRFDQIANSVS 86
          FPVY  DQ  NSV+
Sbjct: 61 FPVYHIDQTQNSVT 74

[Close]

BLAST of Sed0025153 vs. NCBI nr
Match: XP_019076068.1 (PREDICTED: chaperone protein dnaJ 16 isoform X2 [Vitis vinifera])

HSP 1 Score: 93.6 bits (231), Expect = 9.1e-16
Identity = 57/160 (35.62%), Postives = 67/160 (41.88%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE-------------- 67
           ++ ++YHPDKNANDPKAADMF EVTFSY ILSDP+KRRQYD AGFE              
Sbjct: 42  KMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDTAGFEAVESEGQELELDLS 101

Query: 68  ------------------------------------------------------------ 86
                                                                       
Sbjct: 102 NLGAVNTMFAALFSKLGVPIKTTVSATVLEDALNGVVTVRPLTLGQPVVKKLLYFDQEEG 161

[Close]

BLAST of Sed0025153 vs. NCBI nr
Match: KAG7020762.1 (Chaperone protein dnaJ 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 91.3 bits (225), Expect = 4.5e-15
Identity = 61/178 (34.27%), Postives = 69/178 (38.76%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE-------------- 67
           ++ ++YHPDKNANDPKAA+MF EVTFSYTILSDPEKRRQYDAAGFE              
Sbjct: 42  KLALKYHPDKNANDPKAAEMFKEVTFSYTILSDPEKRRQYDAAGFEAVETESQELELDLS 101

Query: 68  ------------------------------------------------------------ 85
                                                                       
Sbjct: 102 SLGTVNTMFAALFSKLGVPIKTAVSATVLEEALNGVVTVHPLPLGIPISKKETQGGFVCR 161

[Close]

BLAST of Sed0025153 vs. NCBI nr
Match: XP_022973275.1 (chaperone protein dnaJ 16-like [Cucurbita maxima] >XP_022973276.1 chaperone protein dnaJ 16-like [Cucurbita maxima] >XP_022973278.1 chaperone protein dnaJ 16-like [Cucurbita maxima] >XP_022973279.1 chaperone protein dnaJ 16-like [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTK 59
          ++ ++YHPDKNANDPKAADMF EVTFSYTILSDPEKRRQYDAAGFE   T+
Sbjct: 42 KLALKYHPDKNANDPKAADMFKEVTFSYTILSDPEKRRQYDAAGFEAVETE 92

[Close]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot
Match: Q8VXV4 (Chaperone protein dnaJ 16 OS=Arabidopsis thaliana OX=3702 GN=ATJ16 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-15
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE 54
          ++ ++YHPDK ANDP AADMF EVTFSY ILSDPEKRRQ+D+AGFE
Sbjct: 42 KLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQFDSAGFE 87

HSP 2 Score: 48.5 bits (114), Expect = 4.4e-05
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 53  EEEGTKGGKVTTAGMYFFGFPVYRFDQIANSVSQ 87
           +E+  + GK+T+AGMYF GFPVYR D   NS++Q
Sbjct: 204 QEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQ 237

[Close]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot
Match: Q9ZSY2 (Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.7e-13
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE 54
          ++ ++YHPDKNAN+P A+++F EV FSY+ILSDPEKRR YD AGFE
Sbjct: 39 KLALKYHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGFE 84

[Close]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot
Match: Q6XL73 (Chaperone protein dnaJ 39 OS=Arabidopsis thaliana OX=3702 GN=ATJ39 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-11
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 11 MRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEG 57
          +RYHPDKN +DP AA+MF EVTF+Y +LSDPE RR YD  G E  G
Sbjct: 48 LRYHPDKNPDDPVAAEMFKEVTFAYEVLSDPENRRLYDTTGSEAVG 93

HSP 2 Score: 48.9 bits (115), Expect = 3.4e-05
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 53  EEEGTKGGKVTTAGMYFFGFPVYRFDQIANS 84
           +E+  K GK++TAG+YFFGFPVYRFD   NS
Sbjct: 207 QEDSRKTGKLSTAGLYFFGFPVYRFDHRVNS 237

[Close]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot
Match: P50027 (DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0093 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-08
Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAG--FEEEGTKGGKVTT- 67
           ++ ++YHPDKN  D  A + F E++ +Y +LSDPEKR++YD  G  +++ GT G    + 
Sbjct: 30  KLALKYHPDKNPGDKAAEEKFKEISEAYEVLSDPEKRQKYDQFGRYWQQAGTAGQPSGSY 89

Query: 68  ---AGMYFFGFPVYRFDQIANSVSQL 88
               G+ F GF   ++      +++L
Sbjct: 90  GPGVGVDFGGFDFSQYGNFDEFINEL 115

[Close]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot
Match: Q3ZBA6 (DnaJ homolog subfamily B member 11 OS=Bos taurus OX=9913 GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-08
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAG- 67
           ++ ++ HPD+N +DP+A + F ++  +Y +LSD EKR+QYD  G  EEG K G  ++ G 
Sbjct: 47  KLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYG--EEGLKDGHQSSHGD 106

Query: 68  --MYFFG 72
              +FFG
Sbjct: 107 IFSHFFG 111

[Close]

BLAST of Sed0025153 vs. ExPASy TrEMBL
Match: A0A1J6ITC4 (Chaperone protein dnaj 16 OS=Nicotiana attenuata OX=49451 GN=ATJ16_0 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27
Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAGM 67
           ++ ++YHPDKNANDPKAADMF EVTFSY ILSDP+KRRQYD+AGFEE+ +K GKVT+AGM
Sbjct: 42  KLALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEEDSSKTGKVTSAGM 101

Query: 68  YFFGFPVYRFDQIANSVS 86
           YF GFPVY  DQ  NSV+
Sbjct: 102 YFLGFPVYHIDQTQNSVT 119

[Close]

BLAST of Sed0025153 vs. ExPASy TrEMBL
Match: A0A1J6J8I1 (Chaperone protein dnaj 16 (Fragment) OS=Nicotiana attenuata OX=49451 GN=ATJ16_1 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 12 RYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGGKVTTAGMYFFG 71
          RYHPDKNANDPKAADMF EVTFSY ILSDP+KRRQYD+AGFEE+ +K GKVT+AGMYF G
Sbjct: 1  RYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEEDSSKTGKVTSAGMYFLG 60

Query: 72 FPVYRFDQIANSVS 86
          FPVY  DQ  NSV+
Sbjct: 61 FPVYHIDQTQNSVT 74

[Close]

BLAST of Sed0025153 vs. ExPASy TrEMBL
Match: A0A6J1I878 (chaperone protein dnaJ 16-like OS=Cucurbita maxima OX=3661 GN=LOC111471846 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTK 59
          ++ ++YHPDKNANDPKAADMF EVTFSYTILSDPEKRRQYDAAGFE   T+
Sbjct: 42 KLALKYHPDKNANDPKAADMFKEVTFSYTILSDPEKRRQYDAAGFEAVETE 92

[Close]

BLAST of Sed0025153 vs. ExPASy TrEMBL
Match: A0A1S3CPM8 (chaperone protein dnaJ 16 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503369 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-15
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 11 MRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTK 59
          ++YHPDKNANDPKAADMF EVTFSYTILSDPEKRRQYDAAGFE   T+
Sbjct: 45 LKYHPDKNANDPKAADMFKEVTFSYTILSDPEKRRQYDAAGFEAVETE 92

[Close]

BLAST of Sed0025153 vs. ExPASy TrEMBL
Match: A0A5D3CS28 (Chaperone protein dnaJ 16 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-15
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 11 MRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEGTK 59
          ++YHPDKNANDPKAADMF EVTFSYTILSDPEKRRQYDAAGFE   T+
Sbjct: 45 LKYHPDKNANDPKAADMFKEVTFSYTILSDPEKRRQYDAAGFEAVETE 92

[Close]

BLAST of Sed0025153 vs. TAIR 10
Match: AT1G24120.1 (ARG1-like 1 )

HSP 1 Score: 80.9 bits (198), Expect = 5.7e-16
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE 54
          ++ ++YHPDK ANDP AADMF EVTFSY ILSDPEKRRQ+D+AGFE
Sbjct: 42 KLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQFDSAGFE 87

HSP 2 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 53  EEEGTKGGKVTTAGMYFFGFPVYRFDQIANSVSQ 87
           +E+  + GK+T+AGMYF GFPVYR D   NS++Q
Sbjct: 204 QEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQ 237

[Close]

BLAST of Sed0025153 vs. TAIR 10
Match: AT1G68370.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 4.1e-14
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 8  EIRMRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFE 54
          ++ ++YHPDKNAN+P A+++F EV FSY+ILSDPEKRR YD AGFE
Sbjct: 39 KLALKYHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGFE 84

HSP 2 Score: 40.8 bits (94), Expect = 6.5e-04
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 0


Query: 53  EEEGTKGGKVTTAGMYFFGFPVYRFDQIANSVS 86
           +EE  K GKVT+AGMYF  F VYR D   N+++
Sbjct: 201 QEEREKTGKVTSAGMYFLHFQVYRMDTTVNALA 233

[Close]

BLAST of Sed0025153 vs. TAIR 10
Match: AT1G59980.1 (ARG1-like 2 )

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 11 MRYHPDKNANDPKAADMFTEVTFSYTILSDPEKRRQYDAAGFEEEG 57
          +RYHPDKN +DP AA+MF EVTF+Y +LSDPE RR YD  G E  G
Sbjct: 48 LRYHPDKNPDDPVAAEMFKEVTFAYEVLSDPENRRLYDTTGSEAVG 93

HSP 2 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 53  EEEGTKGGKVTTAGMYFFGFPVYRFDQIANS 84
           +E+  K GK++TAG+YFFGFPVYRFD   NS
Sbjct: 207 QEDSRKTGKLSTAGLYFFGFPVYRFDHRVNS 237

[Close]

BLAST of Sed0025153 vs. TAIR 10
Match: AT4G28480.1 (DNAJ heat shock family protein )

HSP 1 Score: 53.5 bits (127), Expect = 9.7e-08
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAAD-MFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGG----KV 67
           ++ M++HPDKN N+ K A+  F +++ +Y +LSDP+KR  YD  G  EEG KG       
Sbjct: 26  KLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG--EEGLKGNVPPPNA 85

Query: 68  TTAGMYFF----GFPVYRFD 79
            T+G  +F    G   +RF+
Sbjct: 86  ATSGASYFSTGDGSSSFRFN 103

[Close]

BLAST of Sed0025153 vs. TAIR 10
Match: AT4G28480.2 (DNAJ heat shock family protein )

HSP 1 Score: 53.5 bits (127), Expect = 9.7e-08
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 8   EIRMRYHPDKNANDPKAAD-MFTEVTFSYTILSDPEKRRQYDAAGFEEEGTKGG----KV 67
           ++ M++HPDKN N+ K A+  F +++ +Y +LSDP+KR  YD  G  EEG KG       
Sbjct: 26  KLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG--EEGLKGNVPPPNA 85

Query: 68  TTAGMYFF----GFPVYRFD 79
            T+G  +F    G   +RF+
Sbjct: 86  ATSGASYFSTGDGSSSFRFN 103

The following BLAST results are available for this feature:

BLAST of Sed0025153 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_019246543.1	6.7e-27	74.36	PREDICTED: chaperone protein dnaJ 16-like [Nicotiana attenuata] >OIT03800.1 chap...	[more]
OIT08976.1	8.8e-27	79.73	chaperone protein dnaj 16, partial [Nicotiana attenuata]	[more]
XP_019076068.1	9.1e-16	35.63	PREDICTED: chaperone protein dnaJ 16 isoform X2 [Vitis vinifera]	[more]
KAG7020762.1	4.5e-15	34.27	Chaperone protein dnaJ 16 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022973275.1	5.9e-15	80.39	chaperone protein dnaJ 16-like [Cucurbita maxima] >XP_022973276.1 chaperone prot...	[more]

BLAST of Sed0025153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXV4	8.0e-15	76.09	Chaperone protein dnaJ 16 OS=Arabidopsis thaliana OX=3702 GN=ATJ16 PE=2 SV=1	[more]
Q9ZSY2	5.7e-13	67.39	Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1	[more]
Q6XL73	3.1e-11	65.22	Chaperone protein dnaJ 39 OS=Arabidopsis thaliana OX=3702 GN=ATJ39 PE=2 SV=2	[more]
P50027	3.2e-08	33.72	DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111...	[more]
Q3ZBA6	5.5e-08	41.79	DnaJ homolog subfamily B member 11 OS=Bos taurus OX=9913 GN=DNAJB11 PE=2 SV=1	[more]

BLAST of Sed0025153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1J6ITC4	3.2e-27	74.36	Chaperone protein dnaj 16 OS=Nicotiana attenuata OX=49451 GN=ATJ16_0 PE=4 SV=1	[more]
A0A1J6J8I1	4.2e-27	79.73	Chaperone protein dnaj 16 (Fragment) OS=Nicotiana attenuata OX=49451 GN=ATJ16_1 ...	[more]
A0A6J1I878	2.8e-15	80.39	chaperone protein dnaJ 16-like OS=Cucurbita maxima OX=3661 GN=LOC111471846 PE=4 ...	[more]
A0A1S3CPM8	6.3e-15	85.42	chaperone protein dnaJ 16 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503369 PE=...	[more]
A0A5D3CS28	6.3e-15	85.42	Chaperone protein dnaJ 16 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Sed0025153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24120.1	5.7e-16	76.09	ARG1-like 1	[more]
AT1G68370.1	4.1e-14	67.39	Chaperone DnaJ-domain superfamily protein	[more]
AT1G59980.1	2.2e-12	65.22	ARG1-like 2	[more]
AT4G28480.1	9.7e-08	38.75	DNAJ heat shock family protein	[more]
AT4G28480.2	9.7e-08	38.75	DNAJ heat shock family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 23..43 score: 40.07 coord: 43..62 score: 30.27 coord: 6..21 score: 34.82
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 11..48 e-value: 6.1E-13 score: 48.7
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 1..51 score: 12.795898
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 11..40 e-value: 2.62664E-8 score: 44.0733
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 8..67 e-value: 1.0E-14 score: 56.4
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 11..71
None	No IPR available	PANTHER	PTHR44272:SF10	DNAJ DOMAIN-CONTAINING PROTEIN-RELATED	coord: 9..53
None	No IPR available	PANTHER	PTHR44272	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	coord: 9..53
None	No IPR available	PANTHER	PTHR44272:SF10	DNAJ DOMAIN-CONTAINING PROTEIN-RELATED	coord: 54..83
None	No IPR available	PANTHER	PTHR44272	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	coord: 54..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025153.1	Sed0025153.1	mRNA