Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTGGTGGTAATGATGATGAAGAAGCTCTCTGTGTTCTTCAACTGCTTTGCTTTCTGTTCTCTCTTTCTTGCAGCTCTTGTTTCCTCCAAGTACCATGGTATGATTCTCCCTTTGTTTGTTTTTATGATTTCTTGCAATGTGAGTGATGGGTTTTGATTTGATTCAGTTTTGTGATTGGTTGTGTGTTTTGATGTTAGTATTCAAGAGTGTTGAGAATGGTAGTAGGTTTTGACAGTTGTTTCGTAAGATTAGTCGAGATGAGGGGGTGTTATTGGTTATGTTTGCATTCAAGAGTTGTGTTGACTATCATAGGTTGATTTAGTGGTCGAAAATTACCTTAGGAGCCAAAAAGTTACAAACTCAATTCATGTTGGTCACTTAGCAGGTAAATTGTCTTTTGGCATCCAAATGTTGCAAGGCTAGGTGGTATGCCGTTAAAATAGTTGAGGTGTGCTTGAATTGGCACAAACACTCACATTTATCATTAAAAAAAAGTACATTTTTTGTCTCTAAATTTTTAGTGAAGTTTCAATTAAATCCCTACGTTTTGAAATCAAAAGTTTTATTCGTGATATTTCAATATTATTCAATTTTAGTCTTTGAGATAATAAAATTGTTAGTTACATGGAACAAAATTGTTACTTGTTAGTTACATTATGAAATGTTGAAGTCAATGATCGGAATAATTTTAAATTCTAATATATTGATGAAGTGATTATTTTGATTTTGACATGAACTAATTCTTTACTGAAAATAAGTATTAAACTCATGAACTAGTTAAGCATTGTTTTGAAGTTTTTTTTAGTCTTGGTTTAGCAAATTCATCCCAGTGTCCACCTGGTTGCTTCTCCCATTTCTTCTTCCTGTTGCTTCCTAATCAACAGCCTGGTTGTGTGATTGTTGTATTCATTTCTTGGAGGAATTGCACTAACTTGTCAAGTTACTGAAGTTGCTACAACTTGAAATTAGGGAATGCTTGGTTTTTCCAGTAGTCTTTGAATTTTTTGCTCACCAGTTCAAATAGACCTTTGAGTTTGTACTTGATTTTCTTGCCAAATCAACTAGCCCCGGAAATGGACGACATTGAATTGCACAACCTATACGTGACTGTCGAGGCAAGTGTCGAACCTCGATAAGTAGGAGGGTAGGGTAGAGCATGATGTTGATGCCCCTAGTTCATTTGAGATTATGATTAAGGTAGACTTTGTTTTGGCATTATGATTAAGGTAAAGTAAGAAGATTGCTTTATAAATCGCACCTACTTCTCTCTTTCTCTCCTTGGTGCTGATAAGGGATCAGTCATCCGTCTTCCCTCTAGCCATATCCGAGGGAAGAGTTTCTCCATATATGAATAACATTTTCCGATTCTGCGAGCCTAAGGATGAAAGAAATAACTCTCGACTTCGTCTTTTTGGACAAATGATGCCTCCTCTCTTTTGGTTTACGAGTTAGATGTTCAACTCTTAGAGAGTTATAGGTTCCCCACAAGGTCTCGGTTCGACACTCACCTGTGACATTACTTCTCATTACTCTTTCAATGTCTCCGTACTAATTATTGTTGTTACAAAAAAAAAAACTCTTTAGAGAGTTATAGGATTTGTTATGTGTCATAAATCCTATGTAAATTGGTTCATATATTGTGTTAGCTCCTCTGTAACACTTTCATTTGATAAAGATGTTTTCTGTTTCGTATTAAAAAAAAGATTCATAGCATCAAAGAGAGTGTTGTTGAAGTTGTTATAATCCTTGGCAGCACAAAATGATAAATCCATTGGGACATTTTCAGTTTCATTTTGTTTTTGGCAGAATGGATTTATAAATTACTCAGTTTCTTCATTCTACAGGAAACCCAGCAAATGATCTAGTAGATATCATCAACGAAAACCGAACCGCCGTGAAGCTCTCTAAACTAAGTGACAGTGCCGGTCTCGGGTGCATGGCTCTGCAATTTGCAAAATTCTGCAAAGGAAACTGCACGAGCAACAACACAGTCAATTGCAATCCATCGTCCGACAACTTCACCGAAGTCTTCGCACCAGATTGCGGAGTCGAGCTGCCAACTTTCGACATAATAACCGGCCAAATCGTGGCTTGTCAACATGAATATCTCGAGCCAACAGAGGCCTTCTCTCGTGCACTTGCTCCGGATAAGAAAACTCTATCCCTGTTGAGGAACAAATCTCACACAGTGGTTGGGGTGGGAATGATTGGGGTTCATAAAGGGCCATTTTTCTGGTGTGTTTTGTTCAGCAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAGCAAAAGAGAGGATGCTTTAGTGGAATTAGTGTTGAATGCAGTAGAGGTCATTCCAATGGAGCTTTTTGGAACAATGTTTACTTTGTTATGTTCTTTCTTATTATCTCTTGCAAGATTTGTTCCTTTTCATTTATGGTGATGTAAAATGTAGGGATTGATGATTGAAAATTTTGTTCAATATTGAATTATTGGAAGAGTTTAGAGC
mRNA sequence
TTTTTTTGGTGGTAATGATGATGAAGAAGCTCTCTGTGTTCTTCAACTGCTTTGCTTTCTGTTCTCTCTTTCTTGCAGCTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATCTAGTAGATATCATCAACGAAAACCGAACCGCCGTGAAGCTCTCTAAACTAAGTGACAGTGCCGGTCTCGGGTGCATGGCTCTGCAATTTGCAAAATTCTGCAAAGGAAACTGCACGAGCAACAACACAGTCAATTGCAATCCATCGTCCGACAACTTCACCGAAGTCTTCGCACCAGATTGCGGAGTCGAGCTGCCAACTTTCGACATAATAACCGGCCAAATCGTGGCTTGTCAACATGAATATCTCGAGCCAACAGAGGCCTTCTCTCGTGCACTTGCTCCGGATAAGAAAACTCTATCCCTGTTGAGGAACAAATCTCACACAGTGGTTGGGGTGGGAATGATTGGGGTTCATAAAGGGCCATTTTTCTGGTGTGTTTTGTTCAGCAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAGCAAAAGAGAGGATGCTTTAGTGGAATTAGTGTTGAATGCAGTAGAGGTCATTCCAATGGAGCTTTTTGGAACAATGTTTACTTTGTTATGTTCTTTCTTATTATCTCTTGCAAGATTTGTTCCTTTTCATTTATGGTGATGTAAAATGTAGGGATTGATGATTGAAAATTTTGTTCAATATTGAATTATTGGAAGAGTTTAGAGC
Coding sequence (CDS)
ATGATGATGAAGAAGCTCTCTGTGTTCTTCAACTGCTTTGCTTTCTGTTCTCTCTTTCTTGCAGCTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATCTAGTAGATATCATCAACGAAAACCGAACCGCCGTGAAGCTCTCTAAACTAAGTGACAGTGCCGGTCTCGGGTGCATGGCTCTGCAATTTGCAAAATTCTGCAAAGGAAACTGCACGAGCAACAACACAGTCAATTGCAATCCATCGTCCGACAACTTCACCGAAGTCTTCGCACCAGATTGCGGAGTCGAGCTGCCAACTTTCGACATAATAACCGGCCAAATCGTGGCTTGTCAACATGAATATCTCGAGCCAACAGAGGCCTTCTCTCGTGCACTTGCTCCGGATAAGAAAACTCTATCCCTGTTGAGGAACAAATCTCACACAGTGGTTGGGGTGGGAATGATTGGGGTTCATAAAGGGCCATTTTTCTGGTGTGTTTTGTTCAGCAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAGCAAAAGAGAGGATGCTTTAGTGGAATTAGTGTTGAATGCAGTAGAGGTCATTCCAATGGAGCTTTTTGGAACAATGTTTACTTTGTTATGTTCTTTCTTATTATCTCTTGCAAGATTTGTTCCTTTTCATTTATGGTGATGTAA
Protein sequence
MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGCMALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEPTEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM
Homology
BLAST of Sed0025032 vs. NCBI nr
Match:
XP_022999943.1 (uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima])
HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 200/230 (86.96%), Postives = 206/230 (89.57%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCSL LA LVSSKYHGNPANDLVDIIN NRTA KLS+LS+SAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSLLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSNSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
MALQFA FCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVACQ EYLEP
Sbjct: 61 MALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKK LSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGAFWNNV V+ F IIS KICSFSFMVM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 229
BLAST of Sed0025032 vs. NCBI nr
Match:
KAG6593718.1 (hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 200/230 (86.96%), Postives = 205/230 (89.13%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCS+ LA LVSSKYHGNPANDLVDIIN NRTA KLS+LSDSAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
+ALQFA FCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVACQ EYLEP
Sbjct: 61 IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKKTLSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGAFWNNV VM F IIS KICS SF VM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229
BLAST of Sed0025032 vs. NCBI nr
Match:
KAG7026057.1 (hypothetical protein SDJN02_12555, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 200/230 (86.96%), Postives = 205/230 (89.13%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCS+ LA LVSSKYHGNPANDLVDIIN NRTA KLS+LSDSAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
+ALQFA FCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVACQ EYLEP
Sbjct: 61 IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKKTLSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGA WNNV VM F IIS KICS SFMVM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 229
BLAST of Sed0025032 vs. NCBI nr
Match:
XP_038875229.1 (uncharacterized protein LOC120067738 [Benincasa hispida])
HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109
Identity = 196/230 (85.22%), Postives = 205/230 (89.13%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
M+M+KL F CF CS A LVSSK+HGNPANDLVDIIN NRTA KLS LSDSAGLGC
Sbjct: 1 MIMRKLCT-FECFILCSFLFAVLVSSKFHGNPANDLVDIINRNRTAAKLSHLSDSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
MALQF FCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFD ITGQIVACQ YLEP
Sbjct: 61 MALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPGYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKKTLSLLRNKSHT VGVGM+GVHKGPFFWCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVEC+RGHSNGAFWNNV ++FF IISCKI +FSFMVM
Sbjct: 181 GIKQKRGCFSGSSVECNRGHSNGAFWNNVSVILFFFIISCKISAFSFMVM 229
BLAST of Sed0025032 vs. NCBI nr
Match:
XP_022964386.1 (uncharacterized protein LOC111464418 isoform X1 [Cucurbita moschata])
HSP 1 Score: 404.1 bits (1037), Expect = 8.3e-109
Identity = 199/230 (86.52%), Postives = 204/230 (88.70%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCS+ LA LVSSKYHGNPANDLVDIIN NRTA KLS+LSDSAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
+ALQFA FCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFD IT IVACQ EYLEP
Sbjct: 61 IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKKTLSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGAFWNNV VM F IIS KICS SF VM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229
BLAST of Sed0025032 vs. ExPASy TrEMBL
Match:
A0A6J1KL52 (uncharacterized protein LOC111494268 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 6.2e-110
Identity = 200/230 (86.96%), Postives = 206/230 (89.57%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCSL LA LVSSKYHGNPANDLVDIIN NRTA KLS+LS+SAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSLLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSNSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
MALQFA FCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVACQ EYLEP
Sbjct: 61 MALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKK LSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGAFWNNV V+ F IIS KICSFSFMVM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 229
BLAST of Sed0025032 vs. ExPASy TrEMBL
Match:
A0A6J1HIR8 (uncharacterized protein LOC111464418 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464418 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 4.0e-109
Identity = 199/230 (86.52%), Postives = 204/230 (88.70%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGC 60
MMMKKL + NCF FCS+ LA LVSSKYHGNPANDLVDIIN NRTA KLS+LSDSAGLGC
Sbjct: 1 MMMKKLCL-LNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
Query: 61 MALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEP 120
+ALQFA FCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFD IT IVACQ EYLEP
Sbjct: 61 IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEP 120
Query: 121 TEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
TEAFSRAL PDKKTLSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLENHGL
Sbjct: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
Query: 181 GIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
GIKQKRGCFSG SVECSR HSNGAFWNNV VM F IIS KICS SF VM
Sbjct: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229
BLAST of Sed0025032 vs. ExPASy TrEMBL
Match:
A0A6J1KC53 (uncharacterized protein LOC111494268 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)
HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108
Identity = 200/234 (85.47%), Postives = 206/234 (88.03%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYH----GNPANDLVDIINENRTAVKLSKLSDSA 60
MMMKKL + NCF FCSL LA LVSSKYH GNPANDLVDIIN NRTA KLS+LS+SA
Sbjct: 1 MMMKKLCL-LNCFGFCSLLLAVLVSSKYHVYSTGNPANDLVDIINRNRTAAKLSRLSNSA 60
Query: 61 GLGCMALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHE 120
GLGCMALQFA FCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVACQ E
Sbjct: 61 GLGCMALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPE 120
Query: 121 YLEPTEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLE 180
YLEPTEAFSRAL PDKK LSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTFVLE
Sbjct: 121 YLEPTEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLE 180
Query: 181 NHGLGIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
NHGLGIKQKRGCFSG SVECSR HSNGAFWNNV V+ F IIS KICSFSFMVM
Sbjct: 181 NHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 233
BLAST of Sed0025032 vs. ExPASy TrEMBL
Match:
A0A6J1KEI0 (uncharacterized protein LOC111494268 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)
HSP 1 Score: 399.8 bits (1026), Expect = 7.6e-108
Identity = 200/237 (84.39%), Postives = 206/237 (86.92%), Query Frame = 0
Query: 1 MMMKKLSVFFNCFAFCSLFLAALVSSKYH-------GNPANDLVDIINENRTAVKLSKLS 60
MMMKKL + NCF FCSL LA LVSSKYH GNPANDLVDIIN NRTA KLS+LS
Sbjct: 1 MMMKKLCL-LNCFGFCSLLLAVLVSSKYHGYSVYSTGNPANDLVDIINRNRTAAKLSRLS 60
Query: 61 DSAGLGCMALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVAC 120
+SAGLGCMALQFA FCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFD ITG IVAC
Sbjct: 61 NSAGLGCMALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVAC 120
Query: 121 QHEYLEPTEAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTF 180
Q EYLEPTEAFSRAL PDKK LSLL NKSHT VGVGM+GVHKGPF WCVLFSSGKTNSTF
Sbjct: 121 QPEYLEPTEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTF 180
Query: 181 VLENHGLGIKQKRGCFSGISVECSRGHSNGAFWNNVYFVMFFLIISCKICSFSFMVM 231
VLENHGLGIKQKRGCFSG SVECSR HSNGAFWNNV V+ F IIS KICSFSFMVM
Sbjct: 181 VLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 236
BLAST of Sed0025032 vs. ExPASy TrEMBL
Match:
A0A6J1L4J5 (uncharacterized protein LOC111499082 OS=Cucurbita maxima OX=3661 GN=LOC111499082 PE=4 SV=1)
HSP 1 Score: 391.0 bits (1003), Expect = 3.5e-105
Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 0
Query: 12 CFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGCMALQFAKFCKG 71
CF CS A LV+SK+HGNPANDLVDIIN+NRTA KLS+LSDSAGLGCMALQF FCKG
Sbjct: 9 CFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMALQFINFCKG 68
Query: 72 NCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEPTEAFSRALAPD 131
NCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFD ITGQIVACQ YLEPTEAFSRAL PD
Sbjct: 69 NCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEAFSRALVPD 128
Query: 132 KKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSG 191
KKTLSLLRN+SHT VGVGM+GV+KGPFFWCVLFS+GKTNS+FVLENHGLGIKQKRGCFSG
Sbjct: 129 KKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIKQKRGCFSG 188
Query: 192 ISVECSRGHSNGAFWNNVYFVMFFLIISCKIC-SFSFM 229
SVECSRGHSNGAFWNNV F +FFLII CKIC SFS++
Sbjct: 189 SSVECSRGHSNGAFWNNVSFTLFFLIIYCKICSSFSYI 226
BLAST of Sed0025032 vs. TAIR 10
Match:
AT1G02180.1 (ferredoxin-related )
HSP 1 Score: 227.3 bits (578), Expect = 1.3e-59
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 0
Query: 2 MMKKLSVFFNCFAFCSLFLAALVSSKYHGNPANDLVDIINENRTAVKLSKLSDSAGLGCM 61
M ++S+ F SL + L SSK HGN A+++V I+N+NRTA KL KL++S GLGCM
Sbjct: 1 MKNEISILELILLFLSL-SSVLASSKLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCM 60
Query: 62 ALQFAKFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDIITGQIVACQHEYLEPT 121
ALQ+ + C+GNC NNT++C D+FT+VFAP+CGVELPTF ITG I+ C +Y P
Sbjct: 61 ALQYVELCEGNCNVNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPE 120
Query: 122 EAFSRALAPDKKTLSLLRNKSHTVVGVGMIGVHKGPFFWCVLFSSGKTNSTFVLENHGLG 181
AFS L D LS+LRN+SHT VGVGM +HKG FFWC+LFS G NS+FVLE++G G
Sbjct: 121 VAFSDILFRDSSALSVLRNRSHTEVGVGMARLHKGTFFWCLLFSDGVKNSSFVLEDNGRG 180
Query: 182 IKQKRGCFSGISVECS 198
IKQ+ GC+SG + CS
Sbjct: 181 IKQRTGCYSGSAFPCS 195
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022999943.1 | 1.3e-109 | 86.96 | uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima] | [more] |
KAG6593718.1 | 1.7e-109 | 86.96 | hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7026057.1 | 1.7e-109 | 86.96 | hypothetical protein SDJN02_12555, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038875229.1 | 2.9e-109 | 85.22 | uncharacterized protein LOC120067738 [Benincasa hispida] | [more] |
XP_022964386.1 | 8.3e-109 | 86.52 | uncharacterized protein LOC111464418 isoform X1 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KL52 | 6.2e-110 | 86.96 | uncharacterized protein LOC111494268 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HIR8 | 4.0e-109 | 86.52 | uncharacterized protein LOC111464418 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1KC53 | 3.4e-108 | 85.47 | uncharacterized protein LOC111494268 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1KEI0 | 7.6e-108 | 84.39 | uncharacterized protein LOC111494268 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1L4J5 | 3.5e-105 | 85.78 | uncharacterized protein LOC111499082 OS=Cucurbita maxima OX=3661 GN=LOC111499082... | [more] |
Match Name | E-value | Identity | Description | |
AT1G02180.1 | 1.3e-59 | 55.61 | ferredoxin-related | [more] |