Sed0024301 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGTTTCTCTAGAAGCTTTGGCAATGGCGGGGATTGATCACAATGAGTGGGGTGTGGATGCCGATGAATGGGGAAGGAGTATTGATTCCAACGACGACATTCCCCCGCATTTATTAGCCGATGAAGACGACGACGATGATGTAACAAGTACTATGTTTCCAGCCTCCGGATTCTGCCGCCAGAAAGATGACGGTGGTGGTGGAGTGTACTGCTCTCCGGTGATCATGTGCCATTTCAGTATAGATATAGAGAAAAAAGTTTTGAATTGCGTGAGCTCAGTACGAACAATGGCTAGAGCTATTTTAGGGTTCTTTATGGTGATGACCATAAAGAAAATAACTTCAAAAGGATCCCAATCCTAA ATGTCGGTTTCTCTAGAAGCTTTGGCAATGGCGGGGATTGATCACAATGAGTGGGGTGTGGATGCCGATGAATGGGGAAGGAGTATTGATTCCAACGACGACATTCCCCCGCATTTATTAGCCGATGAAGACGACGACGATGATGTAACAAGTACTATGTTTCCAGCCTCCGGATTCTGCCGCCAGAAAGATGACGGTGGTGGTGGAGTGTACTGCTCTCCGGTGATCATGTGCCATTTCAGTATAGATATAGAGAAAAAAGTTTTGAATTGCGTGAGCTCAGTACGAACAATGGCTAGAGCTATTTTAGGGTTCTTTATGGTGATGACCATAAAGAAAATAACTTCAAAAGGATCCCAATCCTAA ATGTCGGTTTCTCTAGAAGCTTTGGCAATGGCGGGGATTGATCACAATGAGTGGGGTGTGGATGCCGATGAATGGGGAAGGAGTATTGATTCCAACGACGACATTCCCCCGCATTTATTAGCCGATGAAGACGACGACGATGATGTAACAAGTACTATGTTTCCAGCCTCCGGATTCTGCCGCCAGAAAGATGACGGTGGTGGTGGAGTGTACTGCTCTCCGGTGATCATGTGCCATTTCAGTATAGATATAGAGAAAAAAGTTTTGAATTGCGTGAGCTCAGTACGAACAATGGCTAGAGCTATTTTAGGGTTCTTTATGGTGATGACCATAAAGAAAATAACTTCAAAAGGATCCCAATCCTAA MSVSLEALAMAGIDHNEWGVDADEWGRSIDSNDDIPPHLLADEDDDDDVTSTMFPASGFCRQKDDGGGGVYCSPVIMCHFSIDIEKKVLNCVSSVRTMARAILGFFMVMTIKKITSKGSQS Homology
BLAST of Sed0024301 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata]) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28 Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of Sed0024301 vs. NCBI nr
Match: KAG6600647.1 (hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 1.8e-25 Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 0
BLAST of Sed0024301 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21 Identity = 66/127 (51.97%), Postives = 87/127 (68.50%), Query Frame = 0
BLAST of Sed0024301 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-21 Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of Sed0024301 vs. NCBI nr
Match: TYK16880.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 6.7e-17 Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of Sed0024301 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.8e-29 Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of Sed0024301 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.0e-18 Identity = 68/135 (50.37%), Postives = 84/135 (62.22%), Query Frame = 0
BLAST of Sed0024301 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.2e-17 Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of Sed0024301 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.7e-16 Identity = 62/123 (50.41%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of Sed0024301 vs. ExPASy TrEMBL
Match: A0A0A0KU90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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